RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 PRR20AP86496 221 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 MYT1Q01538 1121 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 CC2D2BQ6DHV5 1058 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 OGFOD1Q8N543 542 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 TRIM52Q96A61 297 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 ZNF594Q96JF6 807 aaPredicted RBP8.89□□□□□ -0.99
VBP1-202ENST00000460509 TOR4AQ9NXH8 423 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 EMILIN1Q9Y6C2 1016 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 CSB-PGBD3P0DP91 1061 aa8.88□□□□□ -0.99
VBP1-202ENST00000460509 SMPD1P17405 629 aa8.88□□□□□ -0.99
VBP1-202ENST00000460509 ATP1A2P50993 1020 aa8.88□□□□□ -0.99
VBP1-202ENST00000460509 DNAAF2Q9NVR5 837 aaKnown RBP8.88□□□□□ -0.99
VBP1-202ENST00000460509 FAM187AA6NFU0 413 aa8.87□□□□□ -0.99
VBP1-202ENST00000460509 WDR4P57081 412 aaKnown RBP8.87□□□□□ -0.99
VBP1-202ENST00000460509 CRTC2Q53ET0 693 aaPredicted RBP8.87□□□□□ -0.99
VBP1-202ENST00000460509 RBM19Q9Y4C8 960 aaKnown RBP8.87□□□□□ -0.99
VBP1-202ENST00000460509 USP17L15C9J2P7 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L10C9JJH3 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L13C9JLJ4 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L12C9JPN9 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L11C9JVI0 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L21D6R901 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L18D6R9N7 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L22D6RA61 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L17D6RBQ6 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L19D6RCP7 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L20D6RJB6 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 DGAT1O75907 488 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 ZIC2O95409 532 aaPredicted RBP8.86□□□□□ -0.99
VBP1-202ENST00000460509 ERVK-9P63128 1117 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 CLDN10P78369 228 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 USP17L24Q0WX57 530 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 RETREG2Q8NC44 543 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 ITPKCQ96DU7 683 aa8.86□□□□□ -0.99
VBP1-202ENST00000460509 ATG7O95352 703 aa8.85□□□□□ -0.99
VBP1-202ENST00000460509 HPS1Q92902 700 aa8.85□□□□□ -0.99
VBP1-202ENST00000460509 ZFAND3Q9H8U3 227 aa8.85□□□□□ -0.99
VBP1-202ENST00000460509 NOVA2Q9UNW9 492 aaKnown RBP8.85□□□□□ -0.99
VBP1-202ENST00000460509 FAM196BA6NMK8 535 aa8.84□□□□□ -0.99
VBP1-202ENST00000460509 LILRA1O75019 489 aa8.84□□□□□ -0.99
VBP1-202ENST00000460509 ADD1P35611 737 aaKnown RBP8.84□□□□□ -0.99
VBP1-202ENST00000460509 CBLBQ13191 982 aa8.84□□□□□ -0.99
VBP1-202ENST00000460509 PTK7Q13308 1070 aa8.84□□□□□ -0.99
VBP1-202ENST00000460509 TPCN2Q8NHX9 752 aa8.84□□□□□ -0.99
VBP1-202ENST00000460509 OSBPL3Q9H4L5 887 aa8.84□□□□□ -0.99
VBP1-202ENST00000460509 PCDHGA11Q9Y5H2 935 aa8.84□□□□□ -0.99
VBP1-202ENST00000460509 POTECB2RU33 542 aa8.83□□□□□ -1
VBP1-202ENST00000460509 CCDC102BQ68D86 513 aa8.83□□□□□ -1
VBP1-202ENST00000460509 LARGE2Q8N3Y3 721 aa8.83□□□□□ -1
VBP1-202ENST00000460509 FAM200AQ8TCP9 573 aa8.83□□□□□ -1
VBP1-202ENST00000460509 KIAA1024Q9UPX6 916 aa8.83□□□□□ -1
VBP1-202ENST00000460509 CARNS1A5YM72 827 aa8.82□□□□□ -1
VBP1-202ENST00000460509 ZBTB7BO15156 539 aaPredicted RBP8.82□□□□□ -1
VBP1-202ENST00000460509 PDIA4P13667 645 aaKnown RBP8.82□□□□□ -1
VBP1-202ENST00000460509 TIMP2P16035 220 aa8.82□□□□□ -1
VBP1-202ENST00000460509 DPYDQ12882 1025 aa8.82□□□□□ -1
VBP1-202ENST00000460509 CYP2U1Q7Z449 544 aa8.82□□□□□ -1
VBP1-202ENST00000460509 ANKMY2Q8IV38 441 aa8.82□□□□□ -1
VBP1-202ENST00000460509 ST8SIA5O15466 376 aa8.81□□□□□ -1
VBP1-202ENST00000460509 STAU1O95793 577 aaKnown RBP8.81□□□□□ -1
VBP1-202ENST00000460509 STK32AQ8WU08 396 aa8.81□□□□□ -1
VBP1-202ENST00000460509 ZNF775Q96BV0 537 aaPredicted RBP8.81□□□□□ -1
VBP1-202ENST00000460509 AGBL1Q96MI9 1066 aa8.81□□□□□ -1
VBP1-202ENST00000460509 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
VBP1-202ENST00000460509 SFI1A8K8P3 1242 aa8.8□□□□□ -1
VBP1-202ENST00000460509 CAPN5O15484 640 aaPredicted RBP8.8□□□□□ -1
VBP1-202ENST00000460509 RELBQ01201 579 aa8.8□□□□□ -1
VBP1-202ENST00000460509 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.8□□□□□ -1
VBP1-202ENST00000460509 ZMIZ1Q9ULJ6 1067 aa8.8□□□□□ -1
VBP1-202ENST00000460509 ADH1AP07327 375 aa8.79□□□□□ -1
VBP1-202ENST00000460509 GDF10P55107 478 aa8.79□□□□□ -1
VBP1-202ENST00000460509 SEC13P55735 322 aa8.79□□□□□ -1
VBP1-202ENST00000460509 ELOAQ14241 798 aaKnown RBP8.79□□□□□ -1
VBP1-202ENST00000460509 TMEM164Q5U3C3 297 aa8.79□□□□□ -1
VBP1-202ENST00000460509 KLF16Q9BXK1 252 aaPredicted RBP8.79□□□□□ -1
VBP1-202ENST00000460509 ARHGEF10LQ9HCE6 1279 aa8.79□□□□□ -1
VBP1-202ENST00000460509 SERTAD1Q9UHV2 236 aa8.79□□□□□ -1
VBP1-202ENST00000460509 LGR5O75473 907 aa8.78□□□□□ -1
VBP1-202ENST00000460509 PDE4CQ08493 712 aa8.78□□□□□ -1
VBP1-202ENST00000460509 SIX5Q8N196 739 aa8.78□□□□□ -1
VBP1-202ENST00000460509 HINFPQ9BQA5 517 aa8.78□□□□□ -1
VBP1-202ENST00000460509 ZNF395Q9H8N7 513 aaPredicted RBP8.78□□□□□ -1
VBP1-202ENST00000460509 AAASQ9NRG9 546 aa8.78□□□□□ -1
VBP1-202ENST00000460509 MEN1O00255 615 aa8.77□□□□□ -1.01
VBP1-202ENST00000460509 GNRH1P01148 92 aa8.77□□□□□ -1.01
VBP1-202ENST00000460509 ESCO1Q5FWF5 840 aa8.76□□□□□ -1.01
VBP1-202ENST00000460509 Q6ZVU0 165 aa8.76□□□□□ -1.01
VBP1-202ENST00000460509 ETNK1Q9HBU6 452 aa8.76□□□□□ -1.01
VBP1-202ENST00000460509 ZNF358Q9NW07 568 aa8.76□□□□□ -1.01
VBP1-202ENST00000460509 A0A1W2PRU2 124 aa8.75□□□□□ -1.01
VBP1-202ENST00000460509 TMEM229AB2RXF0 380 aa8.75□□□□□ -1.01
VBP1-202ENST00000460509 UPP2O95045 317 aa8.75□□□□□ -1.01
VBP1-202ENST00000460509 PTGIRP43119 386 aa8.75□□□□□ -1.01
VBP1-202ENST00000460509 SCNN1DP51172 638 aa8.75□□□□□ -1.01
VBP1-202ENST00000460509 TSEN2Q8NCE0 465 aaKnown RBP8.75□□□□□ -1.01
VBP1-202ENST00000460509 DACH1Q9UI36 760 aa8.75□□□□□ -1.01
VBP1-202ENST00000460509 USTQ9Y2C2 406 aa8.75□□□□□ -1.01
VBP1-202ENST00000460509 TMEM88BA6NKF7 163 aa8.74□□□□□ -1.01
VBP1-202ENST00000460509 BACH1O14867 736 aa8.74□□□□□ -1.01
VBP1-202ENST00000460509 DKK1O94907 266 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms