RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 EXOSC9Q06265 439 aaKnown RBP18.72■□□□□ 0.59
PCNP-202ENST00000460231 LGR6Q9HBX8 967 aa18.72■□□□□ 0.59
PCNP-202ENST00000460231 BCL2L13Q9BXK5 485 aa18.71■□□□□ 0.59
PCNP-202ENST00000460231 USP35Q9P2H5 1018 aa18.71■□□□□ 0.59
PCNP-202ENST00000460231 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
PCNP-202ENST00000460231 TSPYL6Q8N831 410 aa18.71■□□□□ 0.59
PCNP-202ENST00000460231 MBIPQ9NS73 344 aa18.71■□□□□ 0.59
PCNP-202ENST00000460231 ZNF853P0CG23 659 aa18.7■□□□□ 0.58
PCNP-202ENST00000460231 C20orf194Q5TEA3 1177 aa18.7■□□□□ 0.58
PCNP-202ENST00000460231 CRB1P82279 1406 aa18.7■□□□□ 0.58
PCNP-202ENST00000460231 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
PCNP-202ENST00000460231 ELL2O00472 640 aaPredicted RBP18.68■□□□□ 0.58
PCNP-202ENST00000460231 HSPA1LP34931 641 aa18.68■□□□□ 0.58
PCNP-202ENST00000460231 TOM1L2Q6ZVM7 507 aa18.68■□□□□ 0.58
PCNP-202ENST00000460231 RRP1P56182 461 aaKnown RBP18.67■□□□□ 0.58
PCNP-202ENST00000460231 MPRIPQ6WCQ1 1025 aa18.67■□□□□ 0.58
PCNP-202ENST00000460231 TNNQ9UQP3 1299 aa18.67■□□□□ 0.58
PCNP-202ENST00000460231 ABCC6O95255 1503 aa18.67■□□□□ 0.58
PCNP-202ENST00000460231 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
PCNP-202ENST00000460231 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
PCNP-202ENST00000460231 EP400Q96L91 3159 aa18.66■□□□□ 0.58
PCNP-202ENST00000460231 GAS2L2Q8NHY3 880 aa18.66■□□□□ 0.58
PCNP-202ENST00000460231 IL16Q14005 1332 aa18.65■□□□□ 0.58
PCNP-202ENST00000460231 GNAT3A8MTJ3 354 aa18.65■□□□□ 0.58
PCNP-202ENST00000460231 C8orf58Q8NAV2 365 aa18.65■□□□□ 0.58
PCNP-202ENST00000460231 TCERG1O14776 1098 aaKnown RBP18.65■□□□□ 0.58
PCNP-202ENST00000460231 CFAP44Q96MT7 982 aa18.64■□□□□ 0.57
PCNP-202ENST00000460231 MYH16Q9H6N6 1097 aa18.64■□□□□ 0.57
PCNP-202ENST00000460231 LRRC37A3O60309 1634 aa18.64■□□□□ 0.57
PCNP-202ENST00000460231 CYP27B1O15528 508 aa18.64■□□□□ 0.57
PCNP-202ENST00000460231 RARSP54136 660 aaKnown RBP18.64■□□□□ 0.57
PCNP-202ENST00000460231 LRP6O75581 1613 aa18.63■□□□□ 0.57
PCNP-202ENST00000460231 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
PCNP-202ENST00000460231 EVA1CP58658 441 aa18.63■□□□□ 0.57
PCNP-202ENST00000460231 IFT57Q9NWB7 429 aa18.63■□□□□ 0.57
PCNP-202ENST00000460231 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
PCNP-202ENST00000460231 CHL1O00533 1208 aa18.62■□□□□ 0.57
PCNP-202ENST00000460231 RAPGEF4Q8WZA2 1011 aa18.62■□□□□ 0.57
PCNP-202ENST00000460231 COL14A1Q05707 1796 aaKnown RBP18.62■□□□□ 0.57
PCNP-202ENST00000460231 RTF1Q92541 710 aaKnown RBP18.62■□□□□ 0.57
PCNP-202ENST00000460231 KCNQ3O43525 872 aa18.61■□□□□ 0.57
PCNP-202ENST00000460231 LMOD3Q0VAK6 560 aa18.61■□□□□ 0.57
PCNP-202ENST00000460231 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
PCNP-202ENST00000460231 PLEKHO1Q53GL0 409 aaPredicted RBP18.61■□□□□ 0.57
PCNP-202ENST00000460231 KDM6AO15550 1401 aaPredicted RBP18.6■□□□□ 0.57
PCNP-202ENST00000460231 GNAI1P63096 354 aa18.59■□□□□ 0.57
PCNP-202ENST00000460231 SSH1Q8WYL5 1049 aa18.59■□□□□ 0.57
PCNP-202ENST00000460231 CARD10Q9BWT7 1032 aa18.59■□□□□ 0.57
PCNP-202ENST00000460231 TATP17735 454 aaPredicted RBP18.59■□□□□ 0.57
PCNP-202ENST00000460231 AKAP4Q5JQC9 854 aa18.59■□□□□ 0.57
PCNP-202ENST00000460231 SHANK3Q9BYB0 1731 aa18.59■□□□□ 0.57
PCNP-202ENST00000460231 OVOS2A0A0G2JMS6 1433 aa18.58■□□□□ 0.57
PCNP-202ENST00000460231 VAMP4O75379 141 aa18.58■□□□□ 0.57
PCNP-202ENST00000460231 NEFLP07196 543 aa18.58■□□□□ 0.57
PCNP-202ENST00000460231 EXOC6Q8TAG9 804 aa18.58■□□□□ 0.57
PCNP-202ENST00000460231 NRAPQ86VF7 1730 aa18.58■□□□□ 0.56
PCNP-202ENST00000460231 PHKG2P15735 406 aa18.58■□□□□ 0.56
PCNP-202ENST00000460231 C8orf37Q96NL8 207 aa18.58■□□□□ 0.56
PCNP-202ENST00000460231 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
PCNP-202ENST00000460231 RNMTO43148 476 aaKnown RBP18.57■□□□□ 0.56
PCNP-202ENST00000460231 AMOTQ4VCS5 1084 aa18.57■□□□□ 0.56
PCNP-202ENST00000460231 JCADQ9P266 1359 aa18.57■□□□□ 0.56
PCNP-202ENST00000460231 TSPYL4Q9UJ04 414 aa18.57■□□□□ 0.56
PCNP-202ENST00000460231 FRAT1Q92837 279 aaPredicted RBP18.56■□□□□ 0.56
PCNP-202ENST00000460231 RLBP1P12271 317 aa18.55■□□□□ 0.56
PCNP-202ENST00000460231 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
PCNP-202ENST00000460231 C1orf141Q5JVX7 400 aa18.55■□□□□ 0.56
PCNP-202ENST00000460231 SLIT2O94813 1529 aa18.55■□□□□ 0.56
PCNP-202ENST00000460231 IL2RBP14784 551 aa18.54■□□□□ 0.56
PCNP-202ENST00000460231 TWISTNBQ3B726 338 aaPredicted RBP18.54■□□□□ 0.56
PCNP-202ENST00000460231 CRBNQ96SW2 442 aa18.54■□□□□ 0.56
PCNP-202ENST00000460231 BCL9LQ86UU0 1499 aa18.54■□□□□ 0.56
PCNP-202ENST00000460231 DDX54Q8TDD1 881 aaKnown RBP18.54■□□□□ 0.56
PCNP-202ENST00000460231 PANK1Q8TE04 598 aa18.54■□□□□ 0.56
PCNP-202ENST00000460231 ADAMTS7Q9UKP4 1686 aa18.53■□□□□ 0.56
PCNP-202ENST00000460231 CALD1Q05682 793 aaKnown RBP18.53■□□□□ 0.56
PCNP-202ENST00000460231 PRAMEF22A3QJZ6 481 aa18.52■□□□□ 0.56
PCNP-202ENST00000460231 SLC39A6Q13433 755 aa18.52■□□□□ 0.56
PCNP-202ENST00000460231 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
PCNP-202ENST00000460231 CLUAP1Q96AJ1 413 aa18.52■□□□□ 0.56
PCNP-202ENST00000460231 DISP2A7MBM2 1401 aa18.52■□□□□ 0.56
PCNP-202ENST00000460231 PARP4Q9UKK3 1724 aaKnown RBP18.52■□□□□ 0.56
PCNP-202ENST00000460231 ZCRB1Q8TBF4 217 aaKnown RBP18.52■□□□□ 0.56
PCNP-202ENST00000460231 NECTIN2Q92692 538 aa18.52■□□□□ 0.56
PCNP-202ENST00000460231 SMC4Q9NTJ3 1288 aa18.52■□□□□ 0.56
PCNP-202ENST00000460231 SCN11AQ9UI33 1791 aa18.51■□□□□ 0.55
PCNP-202ENST00000460231 SPG7Q9UQ90 795 aa18.51■□□□□ 0.55
PCNP-202ENST00000460231 SIPA1L3O60292 1781 aaPredicted RBP18.51■□□□□ 0.55
PCNP-202ENST00000460231 B4GALNT3Q6L9W6 998 aa18.51■□□□□ 0.55
PCNP-202ENST00000460231 NFATC2IPQ8NCF5 419 aa18.51■□□□□ 0.55
PCNP-202ENST00000460231 IFNL2Q8IZJ0 200 aa18.5■□□□□ 0.55
PCNP-202ENST00000460231 NGLY1Q96IV0 654 aa18.5■□□□□ 0.55
PCNP-202ENST00000460231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.5■□□□□ 0.559e-8■□□□□ 10.5
PCNP-202ENST00000460231 SPATA31A1Q5TZJ5 1347 aa18.5■□□□□ 0.55
PCNP-202ENST00000460231 NOB1Q9ULX3 412 aaKnown RBP18.49■□□□□ 0.55
PCNP-202ENST00000460231 KDM3BQ7LBC6 1761 aa18.49■□□□□ 0.55
PCNP-202ENST00000460231 BTBD11A6QL63 1104 aa18.48■□□□□ 0.55
PCNP-202ENST00000460231 TEFQ10587 303 aa18.48■□□□□ 0.55
PCNP-202ENST00000460231 TOGARAM1Q9Y4F4 1720 aa18.48■□□□□ 0.55
PCNP-202ENST00000460231 MRPL50Q8N5N7 158 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms