RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 MAPK8IP2Q13387 824 aaPredicted RBP10.4□□□□□ -0.74
SHROOM4-203ENST00000460112 ME1P48163 572 aa10.4□□□□□ -0.75
SHROOM4-203ENST00000460112 TSG101Q99816 390 aa10.4□□□□□ -0.75
SHROOM4-203ENST00000460112 PABPN1LA6NDY0 278 aaKnown RBP10.4□□□□□ -0.75
SHROOM4-203ENST00000460112 SKIDA1Q1XH10 827 aa10.4□□□□□ -0.75
SHROOM4-203ENST00000460112 SPATA24Q86W54 205 aa10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 BRPF3Q9ULD4 1205 aa10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 POGZQ7Z3K3 1410 aa10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 OSCARQ8IYS5 282 aa10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 EIF2AK4Q9P2K8 1649 aaKnown RBP10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 POLR3GO15318 223 aaPredicted RBP10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 SURF6O75683 361 aaKnown RBP10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 ZHX3Q9H4I2 956 aa10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 TUBB4AP04350 444 aa10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 MPHOSPH6Q99547 160 aaKnown RBP10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 RAB34Q9BZG1 259 aa10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 LNPKQ9C0E8 428 aa10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 NEMFO60524 1076 aa10.39□□□□□ -0.75
SHROOM4-203ENST00000460112 KIAA1328Q86T90 577 aa10.38□□□□□ -0.75
SHROOM4-203ENST00000460112 ANKRD50Q9ULJ7 1429 aa10.38□□□□□ -0.75
SHROOM4-203ENST00000460112 CENPHQ9H3R5 247 aa10.38□□□□□ -0.75
SHROOM4-203ENST00000460112 LRRC45Q96CN5 670 aa10.38□□□□□ -0.75
SHROOM4-203ENST00000460112 HOMER2Q9NSB8 354 aa10.38□□□□□ -0.75
SHROOM4-203ENST00000460112 ABTB2Q8N961 1025 aa10.38□□□□□ -0.75
SHROOM4-203ENST00000460112 TAOK3Q9H2K8 898 aa10.38□□□□□ -0.75
SHROOM4-203ENST00000460112 CALCOCO1Q9P1Z2 691 aa10.38□□□□□ -0.75
SHROOM4-203ENST00000460112 PPP6R1Q9UPN7 881 aa10.38□□□□□ -0.75
SHROOM4-203ENST00000460112 SYNJ2O15056 1496 aa10.38□□□□□ -0.75
SHROOM4-203ENST00000460112 TRAK2O60296 914 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 ZNF652Q9Y2D9 606 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 SHTN1A0MZ66 631 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 CABP4P57796 275 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 SPA17Q15506 151 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 IRX3P78415 501 aaPredicted RBP10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 SLF2Q8IX21 1173 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 ANKRD30BQ9BXX2 1392 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 NLRP6P59044 892 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 SMC1AQ14683 1233 aaKnown RBP10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 WDR63Q8IWG1 891 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 SREK1Q8WXA9 508 aaKnown RBP10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 CEP63Q96MT8 703 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 FKBP15Q5T1M5 1219 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 SLC4A3P48751 1232 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 RBM10P98175 930 aaKnown RBP10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 RBM42Q9BTD8 480 aaKnown RBP10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 HOOK3Q86VS8 718 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 DDX11Q96FC9 970 aa10.37□□□□□ -0.75
SHROOM4-203ENST00000460112 AK9Q5TCS8 1911 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 IGHMBP2P38935 993 aaKnown RBP10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 UQCRHLA0A096LP55 91 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 UQCRHP07919 91 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 TDO2P48775 406 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 NEK4P51957 841 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 NCOA2Q15596 1464 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 EIF5P55010 431 aaKnown RBP10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 MAP2K1Q02750 393 aaPredicted RBP10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 TMEM87AQ8NBN3 555 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 HMGB1P1B2RPK0 211 aaPredicted RBP10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 ZSCAN12O43309 604 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 ATP2B1P20020 1258 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 CUL5Q93034 780 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 ARHGAP29Q52LW3 1261 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 MICALCLQ6ZW33 695 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 SCLT1Q96NL6 688 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 FMNL2Q96PY5 1086 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 ABCC11Q96J66 1382 aa10.36□□□□□ -0.75
SHROOM4-203ENST00000460112 HMOX1P09601 288 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 FERP16591 822 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 CCDC196A0A1B0GTZ2 297 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 SSR1P43307 286 aaKnown RBP10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 CETN1Q12798 172 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 DRC1Q96MC2 740 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 GOLGA6L9A6NEM1 432 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 PYM1Q9BRP8 204 aaKnown RBP10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 ZMYND15Q9H091 742 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 POTEB2H3BUK9 544 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 FIBPO43427 364 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 SPATA32Q96LK8 384 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 CFAP57Q96MR6 1250 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 TMEM266Q2M3C6 531 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 CCDC83Q8IWF9 413 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 TTC21AQ8NDW8 1320 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 ATAD2Q6PL18 1390 aa10.35□□□□□ -0.75
SHROOM4-203ENST00000460112 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 TSNARE1Q96NA8 513 aa10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 CRACR2AQ9BSW2 395 aa10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 ZNF692Q9BU19 519 aaPredicted RBP10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 KIAA1107Q9UPP5 1409 aa10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 NUP133Q8WUM0 1156 aa10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 AKAP2Q9Y2D5 859 aa10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 LRRFIP2Q9Y608 721 aaKnown RBP10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 UPF3BQ9BZI7 483 aaKnown RBP10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 PTPN23Q9H3S7 1636 aa10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 PPM1FP49593 454 aaPredicted RBP10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 SSX2IPQ9Y2D8 614 aa10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 PPP1R1BQ9UD71 204 aaPredicted RBP10.34□□□□□ -0.75
SHROOM4-203ENST00000460112 STXBP4Q6ZWJ1 553 aa10.33□□□□□ -0.76
SHROOM4-203ENST00000460112 ESCO1Q5FWF5 840 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms