RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 PRKAR2BP31323 418 aa7.65□□□□□ -1.18
UBQLN4-202ENST00000459954 IL13P35225 146 aa7.65□□□□□ -1.18
UBQLN4-202ENST00000459954 NPHP3Q7Z494 1330 aa7.65□□□□□ -1.18
UBQLN4-202ENST00000459954 SLKQ9H2G2 1235 aaPredicted RBP7.65□□□□□ -1.18
UBQLN4-202ENST00000459954 CABP1Q9NZU7 370 aa7.65□□□□□ -1.18
UBQLN4-202ENST00000459954 AK9Q5TCS8 1911 aa7.64□□□□□ -1.19
UBQLN4-202ENST00000459954 USP54Q70EL1 1684 aa7.64□□□□□ -1.19
UBQLN4-202ENST00000459954 KIAA0232Q92628 1395 aa7.64□□□□□ -1.19
UBQLN4-202ENST00000459954 GOLGA6L3A6NEY3 463 aa7.64□□□□□ -1.19
UBQLN4-202ENST00000459954 MRE11P49959 708 aa7.64□□□□□ -1.19
UBQLN4-202ENST00000459954 MFAP1P55081 439 aaKnown RBP7.64□□□□□ -1.19
UBQLN4-202ENST00000459954 PSME1Q06323 249 aa7.64□□□□□ -1.19
UBQLN4-202ENST00000459954 WAPLQ7Z5K2 1190 aa7.64□□□□□ -1.19
UBQLN4-202ENST00000459954 LRRC59Q96AG4 307 aaKnown RBP7.64□□□□□ -1.19
UBQLN4-202ENST00000459954 CCDC61Q9Y6R9 512 aa7.64□□□□□ -1.19
UBQLN4-202ENST00000459954 TRAK2O60296 914 aa7.63□□□□□ -1.19
UBQLN4-202ENST00000459954 INTS3Q68E01 1043 aaKnown RBP7.63□□□□□ -1.19
UBQLN4-202ENST00000459954 GBP4Q96PP9 640 aa7.63□□□□□ -1.19
UBQLN4-202ENST00000459954 STRCP1A6NGW2 1772 aa7.63□□□□□ -1.19
UBQLN4-202ENST00000459954 IBTKQ9P2D0 1353 aaPredicted RBP7.62□□□□□ -1.19
UBQLN4-202ENST00000459954 SAFB2Q14151 953 aaKnown RBP eCLIP7.62□□□□□ -1.19
UBQLN4-202ENST00000459954 RAB3GAP1Q15042 981 aa7.62□□□□□ -1.19
UBQLN4-202ENST00000459954 BRINP3Q76B58 766 aa7.62□□□□□ -1.19
UBQLN4-202ENST00000459954 RPAP2Q8IXW5 612 aaPredicted RBP7.62□□□□□ -1.19
UBQLN4-202ENST00000459954 DCTPP1Q9H773 170 aa7.62□□□□□ -1.19
UBQLN4-202ENST00000459954 C1orf167Q5SNV9 1468 aa7.62□□□□□ -1.19
UBQLN4-202ENST00000459954 MST1RQ04912 1400 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 PTPRCP08575 1304 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 PLEKHG3A1L390 1219 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 CDC45O75419 566 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 PIP4K2BP78356 416 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 TWISTNBQ3B726 338 aaPredicted RBP7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 ESCO1Q5FWF5 840 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 ANKRD45Q5TZF3 282 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 ILDR1Q86SU0 546 aaPredicted RBP7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 COG3Q96JB2 828 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 KIF2CQ99661 725 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 LNPKQ9C0E8 428 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 MBIPQ9NS73 344 aa7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.61□□□□□ -1.19
UBQLN4-202ENST00000459954 SOS1Q07889 1333 aaPredicted RBP7.6□□□□□ -1.19
UBQLN4-202ENST00000459954 SPATA31A6Q5VVP1 1343 aa7.6□□□□□ -1.19
UBQLN4-202ENST00000459954 K7ELQ4 463 aaPredicted RBP7.6□□□□□ -1.19
UBQLN4-202ENST00000459954 XRCC6P12956 609 aaKnown RBP eCLIP7.6□□□□□ -1.19
UBQLN4-202ENST00000459954 RABEP1Q15276 862 aa7.6□□□□□ -1.19
UBQLN4-202ENST00000459954 ANKRD44Q8N8A2 993 aa7.6□□□□□ -1.19
UBQLN4-202ENST00000459954 PHACTR3Q96KR7 559 aa7.6□□□□□ -1.19
UBQLN4-202ENST00000459954 PHF8Q9UPP1 1060 aa7.6□□□□□ -1.19
UBQLN4-202ENST00000459954 LRRC37A3O60309 1634 aa7.6□□□□□ -1.19
UBQLN4-202ENST00000459954 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 JCADQ9P266 1359 aa7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 SOS2Q07890 1332 aaPredicted RBP7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 TTC21BQ7Z4L5 1316 aa7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 PEAK1Q9H792 1746 aa7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 CHL1O00533 1208 aa7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 HSP90AB1P08238 724 aaKnown RBP7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 CLCN1P35523 988 aa7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 TBC1D9Q6ZT07 1266 aa7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 SIRT2Q8IXJ6 389 aa7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 NUDT16Q96DE0 195 aaKnown RBP7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 RBM33Q96EV2 1170 aaKnown RBP7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 CWC22Q9HCG8 908 aaKnown RBP7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 OVOS2A0A0J9YW53 1432 aa7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 OVOS2Q6IE36 1432 aa7.59□□□□□ -1.19
UBQLN4-202ENST00000459954 SBNO1A3KN83 1393 aa7.59□□□□□ -1.2
UBQLN4-202ENST00000459954 RTL1A6NKG5 1358 aa7.59□□□□□ -1.2
UBQLN4-202ENST00000459954 ARHGEF10O15013 1369 aa7.59□□□□□ -1.2
UBQLN4-202ENST00000459954 FAM208AQ9UK61 1670 aaKnown RBP7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 XIRP1Q702N8 1843 aaKnown RBP7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 GOLGA6L22H0YM25 854 aa7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 EPB41L2O43491 1005 aaKnown RBP7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 NUCB2P80303 420 aa7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 TTC22Q5TAA0 569 aa7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 PLEKHM2Q8IWE5 1019 aa7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 TSPYL6Q8N831 410 aa7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 NGDNQ8NEJ9 315 aaKnown RBP7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 TNPO1Q92973 898 aaKnown RBP7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 OSBPL3Q9H4L5 887 aa7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 GRPEL1Q9HAV7 217 aa7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 RTN4Q9NQC3 1192 aaKnown RBP7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 RGS12O14924 1447 aa7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 ATP10DQ9P241 1426 aa7.58□□□□□ -1.2
UBQLN4-202ENST00000459954 AHDC1Q5TGY3 1603 aaPredicted RBP7.57□□□□□ -1.2
UBQLN4-202ENST00000459954 RGPD8O14715 1765 aaPredicted RBP7.57□□□□□ -1.2
UBQLN4-202ENST00000459954 FOXO3O43524 673 aa7.57□□□□□ -1.2
UBQLN4-202ENST00000459954 HTATSF1O43719 755 aaKnown RBP7.57□□□□□ -1.2
UBQLN4-202ENST00000459954 HSPA1LP34931 641 aa7.57□□□□□ -1.2
UBQLN4-202ENST00000459954 CASC1Q6TDU7 716 aa7.57□□□□□ -1.2
UBQLN4-202ENST00000459954 C8orf58Q8NAV2 365 aa7.57□□□□□ -1.2
UBQLN4-202ENST00000459954 EMILIN1Q9Y6C2 1016 aa7.57□□□□□ -1.2
UBQLN4-202ENST00000459954 TTC21AQ8NDW8 1320 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 SSH2Q76I76 1423 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 HMMRO75330 724 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 HMOX1P09601 288 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 KLHL40Q2TBA0 621 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 KRT28Q7Z3Y7 464 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 NME9Q86XW9 330 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 IL17RAQ96F46 866 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 ORAI2Q96SN7 254 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms