RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 LTN1O94822 1766 aa23.64■■□□□ 1.37
TMEM50B-205ENST00000459909 CD2APQ9Y5K6 639 aa23.63■■□□□ 1.37
TMEM50B-205ENST00000459909 ROCK2O75116 1388 aaKnown RBP23.63■■□□□ 1.37
TMEM50B-205ENST00000459909 NSD2O96028 1365 aa23.63■■□□□ 1.37
TMEM50B-205ENST00000459909 IP6K1Q92551 441 aa23.62■■□□□ 1.37
TMEM50B-205ENST00000459909 ADCY9O60503 1353 aa23.62■■□□□ 1.37
TMEM50B-205ENST00000459909 LY75O60449 1722 aa23.61■■□□□ 1.37
TMEM50B-205ENST00000459909 CD163L1Q9NR16 1453 aa23.61■■□□□ 1.37
TMEM50B-205ENST00000459909 MSL1Q68DK7 614 aa23.6■■□□□ 1.37
TMEM50B-205ENST00000459909 HDGFL2Q7Z4V5 671 aaPredicted RBP23.6■■□□□ 1.37
TMEM50B-205ENST00000459909 LTV1Q96GA3 475 aaPredicted RBP23.59■■□□□ 1.37
TMEM50B-205ENST00000459909 USP47Q96K76 1375 aa23.58■■□□□ 1.37
TMEM50B-205ENST00000459909 ZCRB1Q8TBF4 217 aaKnown RBP23.58■■□□□ 1.37
TMEM50B-205ENST00000459909 EDC4Q6P2E9 1401 aaKnown RBP23.58■■□□□ 1.36
TMEM50B-205ENST00000459909 HMGB2P26583 209 aaKnown RBP23.57■■□□□ 1.36
TMEM50B-205ENST00000459909 TMC1Q8TDI8 760 aa23.57■■□□□ 1.36
TMEM50B-205ENST00000459909 ZNF526Q8TF50 670 aaPredicted RBP23.57■■□□□ 1.36
TMEM50B-205ENST00000459909 FLAD1Q8NFF5 587 aa23.56■■□□□ 1.36
TMEM50B-205ENST00000459909 FAM208AQ9UK61 1670 aaKnown RBP23.56■■□□□ 1.36
TMEM50B-205ENST00000459909 DOT1LQ8TEK3 1739 aa23.56■■□□□ 1.36
TMEM50B-205ENST00000459909 SLC12A5Q9H2X9 1139 aa23.53■■□□□ 1.36
TMEM50B-205ENST00000459909 TERF2IPQ9NYB0 399 aa23.53■■□□□ 1.36
TMEM50B-205ENST00000459909 HOXC9P31274 260 aa23.5■■□□□ 1.35
TMEM50B-205ENST00000459909 A0A1W2PP64 1363 aa23.5■■□□□ 1.35
TMEM50B-205ENST00000459909 MEGF6O75095 1541 aa23.49■■□□□ 1.35
TMEM50B-205ENST00000459909 KIF3CO14782 793 aa23.48■■□□□ 1.35
TMEM50B-205ENST00000459909 AMPHP49418 695 aa23.48■■□□□ 1.35
TMEM50B-205ENST00000459909 CGNL1Q0VF96 1302 aa23.48■■□□□ 1.35
TMEM50B-205ENST00000459909 MAP3K19Q56UN5 1328 aa23.48■■□□□ 1.35
TMEM50B-205ENST00000459909 IGSF1Q8N6C5 1336 aa23.47■■□□□ 1.35
TMEM50B-205ENST00000459909 APLP1P51693 650 aa23.45■■□□□ 1.34
TMEM50B-205ENST00000459909 COG3Q96JB2 828 aa23.45■■□□□ 1.34
TMEM50B-205ENST00000459909 C5P01031 1676 aa23.44■■□□□ 1.34
TMEM50B-205ENST00000459909 PALLDQ8WX93 1383 aa23.44■■□□□ 1.34
TMEM50B-205ENST00000459909 PUS7Q96PZ0 661 aaKnown RBP23.44■■□□□ 1.34
TMEM50B-205ENST00000459909 SIN3AQ96ST3 1273 aa23.43■■□□□ 1.34
TMEM50B-205ENST00000459909 NBPF6Q5VWK0 638 aa23.42■■□□□ 1.34
TMEM50B-205ENST00000459909 RAPGEF4Q8WZA2 1011 aa23.42■■□□□ 1.34
TMEM50B-205ENST00000459909 AK7Q96M32 723 aa23.42■■□□□ 1.34
TMEM50B-205ENST00000459909 NBPF4Q96M43 638 aa23.42■■□□□ 1.34
TMEM50B-205ENST00000459909 WWC3Q9ULE0 1092 aa23.41■■□□□ 1.34
TMEM50B-205ENST00000459909 RTL1A6NKG5 1358 aa23.4■■□□□ 1.34
TMEM50B-205ENST00000459909 CARD11Q9BXL7 1154 aa23.4■■□□□ 1.34
TMEM50B-205ENST00000459909 PCDH11XQ9BZA7 1347 aa23.39■■□□□ 1.34
TMEM50B-205ENST00000459909 PCDH11YQ9BZA8 1340 aa23.39■■□□□ 1.34
TMEM50B-205ENST00000459909 FBLN1P23142 703 aa23.39■■□□□ 1.33
TMEM50B-205ENST00000459909 MPRIPQ6WCQ1 1025 aa23.39■■□□□ 1.33
TMEM50B-205ENST00000459909 NSD3Q9BZ95 1437 aa23.39■■□□□ 1.33
TMEM50B-205ENST00000459909 TATP17735 454 aaPredicted RBP23.38■■□□□ 1.33
TMEM50B-205ENST00000459909 NEUROD1Q13562 356 aa23.38■■□□□ 1.33
TMEM50B-205ENST00000459909 DNAJC5GQ8N7S2 189 aa23.38■■□□□ 1.33
TMEM50B-205ENST00000459909 CCER1Q8TC90 406 aaPredicted RBP23.38■■□□□ 1.33
TMEM50B-205ENST00000459909 SMARCC1Q92922 1105 aaPredicted RBP23.38■■□□□ 1.33
TMEM50B-205ENST00000459909 TOMM70O94826 608 aa23.37■■□□□ 1.33
TMEM50B-205ENST00000459909 AMIGO3Q86WK7 504 aa23.37■■□□□ 1.33
TMEM50B-205ENST00000459909 USHBP1Q8N6Y0 703 aa23.37■■□□□ 1.33
TMEM50B-205ENST00000459909 C4BP0C0L5 1744 aa23.36■■□□□ 1.33
TMEM50B-205ENST00000459909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.36■■□□□ 1.33
TMEM50B-205ENST00000459909 PHF14O94880 888 aa23.36■■□□□ 1.33
TMEM50B-205ENST00000459909 RGPD2P0DJD1 1756 aa23.36■■□□□ 1.33
TMEM50B-205ENST00000459909 SMG6Q86US8 1419 aaKnown RBP23.35■■□□□ 1.33
TMEM50B-205ENST00000459909 SSFA2P28290 1259 aa23.35■■□□□ 1.33
TMEM50B-205ENST00000459909 TAF1LQ8IZX4 1826 aa23.35■■□□□ 1.33
TMEM50B-205ENST00000459909 CICQ96RK0 1608 aaPredicted RBP23.34■■□□□ 1.33
TMEM50B-205ENST00000459909 RRS1Q15050 365 aaKnown RBP23.33■■□□□ 1.33
TMEM50B-205ENST00000459909 SMIM5Q71RC9 77 aa23.32■■□□□ 1.32
TMEM50B-205ENST00000459909 TOGARAM1Q9Y4F4 1720 aa23.32■■□□□ 1.32
TMEM50B-205ENST00000459909 CYP27B1O15528 508 aa23.31■■□□□ 1.32
TMEM50B-205ENST00000459909 UBR3Q6ZT12 1888 aa23.28■■□□□ 1.32
TMEM50B-205ENST00000459909 PIGBQ92521 554 aa23.28■■□□□ 1.32
TMEM50B-205ENST00000459909 LOC102724428A0A0B4J2F2 783 aa23.27■■□□□ 1.32
TMEM50B-205ENST00000459909 SIK1P57059 783 aa23.27■■□□□ 1.32
TMEM50B-205ENST00000459909 TGFB2P61812 414 aa23.27■■□□□ 1.32
TMEM50B-205ENST00000459909 LINC00116Q8NCU8 138 aa23.27■■□□□ 1.32
TMEM50B-205ENST00000459909 INSRP06213 1382 aa23.27■■□□□ 1.31
TMEM50B-205ENST00000459909 PXDNLA1KZ92 1463 aa23.26■■□□□ 1.31
TMEM50B-205ENST00000459909 HSP90AB2PQ58FF8 381 aa23.26■■□□□ 1.31
TMEM50B-205ENST00000459909 CLSPNQ9HAW4 1339 aa23.26■■□□□ 1.31
TMEM50B-205ENST00000459909 MMP10P09238 476 aa23.25■■□□□ 1.31
TMEM50B-205ENST00000459909 RBM46Q8TBY0 533 aaKnown RBP23.25■■□□□ 1.31
TMEM50B-205ENST00000459909 NMRK2Q9NPI5 230 aa23.25■■□□□ 1.31
TMEM50B-205ENST00000459909 BCS1LQ9Y276 419 aa23.25■■□□□ 1.31
TMEM50B-205ENST00000459909 FYB1O15117 783 aa23.24■■□□□ 1.31
TMEM50B-205ENST00000459909 GNPATO15228 680 aa23.24■■□□□ 1.31
TMEM50B-205ENST00000459909 NKX1-1Q15270 411 aaPredicted RBP23.24■■□□□ 1.31
TMEM50B-205ENST00000459909 SLC24A1O60721 1099 aa23.23■■□□□ 1.31
TMEM50B-205ENST00000459909 KLRG1Q96E93 195 aa23.23■■□□□ 1.31
TMEM50B-205ENST00000459909 TESK2Q96S53 571 aa23.23■■□□□ 1.31
TMEM50B-205ENST00000459909 GGNBP2Q9H3C7 697 aa23.23■■□□□ 1.31
TMEM50B-205ENST00000459909 FLT4P35916 1363 aa23.23■■□□□ 1.31
TMEM50B-205ENST00000459909 KIF24Q5T7B8 1368 aa23.23■■□□□ 1.31
TMEM50B-205ENST00000459909 COL13A1Q5TAT6 717 aaPredicted RBP23.22■■□□□ 1.31
TMEM50B-205ENST00000459909 ARHGAP27Q6ZUM4 889 aa23.22■■□□□ 1.31
TMEM50B-205ENST00000459909 JMYQ8N9B5 988 aa23.22■■□□□ 1.31
TMEM50B-205ENST00000459909 ITGB4P16144 1822 aa23.2■■□□□ 1.3
TMEM50B-205ENST00000459909 A0A0G2JLW4 131 aa23.2■■□□□ 1.3
TMEM50B-205ENST00000459909 ATP6V1AP38606 617 aa23.2■■□□□ 1.3
TMEM50B-205ENST00000459909 ITPK1Q13572 414 aa23.2■■□□□ 1.3
TMEM50B-205ENST00000459909 C16orf71Q8IYS4 520 aaPredicted RBP23.2■■□□□ 1.3
TMEM50B-205ENST00000459909 FSTL1Q12841 308 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms