RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 CAMKK2Q96RR4 588 aa28.22■■■□□ 2.11
VARS-218ENST00000459667 EYA1Q99502 592 aa28.22■■■□□ 2.11
VARS-218ENST00000459667 NHSQ6T4R5 1651 aa28.22■■■□□ 2.11
VARS-218ENST00000459667 PARD3Q8TEW0 1356 aa28.21■■■□□ 2.11
VARS-218ENST00000459667 PTF1AQ7RTS3 328 aa28.2■■■□□ 2.1
VARS-218ENST00000459667 CNGB1Q14028 1251 aaPredicted RBP28.19■■■□□ 2.1
VARS-218ENST00000459667 RREB1Q92766 1687 aa28.19■■■□□ 2.1
VARS-218ENST00000459667 ACSBG1Q96GR2 724 aa28.18■■■□□ 2.1
VARS-218ENST00000459667 RGPD3A6NKT7 1758 aaPredicted RBP28.18■■■□□ 2.1
VARS-218ENST00000459667 RGPD4Q7Z3J3 1758 aa28.18■■■□□ 2.1
VARS-218ENST00000459667 PKD1L3Q7Z443 1732 aa28.16■■■□□ 2.1
VARS-218ENST00000459667 KCNQ2O43526 872 aa28.16■■■□□ 2.1
VARS-218ENST00000459667 IGSF1Q8N6C5 1336 aa28.15■■■□□ 2.1
VARS-218ENST00000459667 DOT1LQ8TEK3 1739 aa28.14■■■□□ 2.1
VARS-218ENST00000459667 PCDH11XQ9BZA7 1347 aa28.14■■■□□ 2.09
VARS-218ENST00000459667 PCDH11YQ9BZA8 1340 aa28.14■■■□□ 2.09
VARS-218ENST00000459667 KAT6BQ8WYB5 2073 aa28.14■■■□□ 2.09
VARS-218ENST00000459667 NUP188Q5SRE5 1749 aa28.13■■■□□ 2.09
VARS-218ENST00000459667 PLSCR1O15162 318 aa28.13■■■□□ 2.09
VARS-218ENST00000459667 MTHFSP49914 203 aa28.13■■■□□ 2.09
VARS-218ENST00000459667 BTAF1O14981 1849 aa28.11■■■□□ 2.09
VARS-218ENST00000459667 SPG7Q9UQ90 795 aa28.08■■■□□ 2.09
VARS-218ENST00000459667 IL13P35225 146 aa28.07■■■□□ 2.08
VARS-218ENST00000459667 CYP27B1O15528 508 aa28.06■■■□□ 2.08
VARS-218ENST00000459667 SYTL4Q96C24 671 aaPredicted RBP28.06■■■□□ 2.08
VARS-218ENST00000459667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.06■■■□□ 2.08
VARS-218ENST00000459667 PLEKHG2Q9H7P9 1386 aa28.06■■■□□ 2.08
VARS-218ENST00000459667 PSDA5PKW4 1024 aaPredicted RBP28.04■■■□□ 2.08
VARS-218ENST00000459667 PRIM1P49642 420 aaKnown RBP28.04■■■□□ 2.08
VARS-218ENST00000459667 AEBP1Q8IUX7 1158 aa28.03■■■□□ 2.08
VARS-218ENST00000459667 R3HDM1Q15032 1099 aaKnown RBP28.01■■■□□ 2.07
VARS-218ENST00000459667 TXNRD1Q16881 649 aa28.01■■■□□ 2.07
VARS-218ENST00000459667 NBPF14Q5TI25 921 aa28.01■■■□□ 2.07
VARS-218ENST00000459667 SULT6B1Q6IMI4 303 aa28.01■■■□□ 2.07
VARS-218ENST00000459667 PROM2Q8N271 834 aa28.01■■■□□ 2.07
VARS-218ENST00000459667 COL3A1P02461 1466 aaPredicted RBP28.01■■■□□ 2.07
VARS-218ENST00000459667 TOGARAM1Q9Y4F4 1720 aa28.01■■■□□ 2.07
VARS-218ENST00000459667 KDRP35968 1356 aa28■■■□□ 2.07
VARS-218ENST00000459667 DIAPH1O60610 1272 aaKnown RBP28■■■□□ 2.07
VARS-218ENST00000459667 PHKG2P15735 406 aa27.97■■■□□ 2.07
VARS-218ENST00000459667 NKX1-1Q15270 411 aaPredicted RBP27.97■■■□□ 2.07
VARS-218ENST00000459667 PLEKHO1Q53GL0 409 aaPredicted RBP27.97■■■□□ 2.07
VARS-218ENST00000459667 IFNL2Q8IZJ0 200 aa27.97■■■□□ 2.07
VARS-218ENST00000459667 PPP2R1AP30153 589 aa27.96■■■□□ 2.07
VARS-218ENST00000459667 ITGB4P16144 1822 aa27.95■■■□□ 2.07
VARS-218ENST00000459667 DDX10Q13206 875 aaKnown RBP27.94■■■□□ 2.06
VARS-218ENST00000459667 AMOTQ4VCS5 1084 aa27.94■■■□□ 2.06
VARS-218ENST00000459667 CFAP53Q96M91 514 aa27.94■■■□□ 2.06
VARS-218ENST00000459667 HMOX1P09601 288 aa27.93■■■□□ 2.06
VARS-218ENST00000459667 ANO8Q9HCE9 1232 aaPredicted RBP27.93■■■□□ 2.06
VARS-218ENST00000459667 ZNF530Q6P9A1 599 aaPredicted RBP27.92■■■□□ 2.06
VARS-218ENST00000459667 LY75O60449 1722 aa27.92■■■□□ 2.06
VARS-218ENST00000459667 MPRIPQ6WCQ1 1025 aa27.91■■■□□ 2.06
VARS-218ENST00000459667 PAPPAQ13219 1627 aa27.9■■■□□ 2.06
VARS-218ENST00000459667 U2SURPO15042 1029 aaKnown RBP27.9■■■□□ 2.06
VARS-218ENST00000459667 HSP90AB1P08238 724 aaKnown RBP27.88■■■□□ 2.05
VARS-218ENST00000459667 SLC27A3Q5K4L6 730 aa27.88■■■□□ 2.05
VARS-218ENST00000459667 C1orf141Q5JVX7 400 aa27.87■■■□□ 2.05
VARS-218ENST00000459667 LRRC4BQ9NT99 713 aa27.87■■■□□ 2.05
VARS-218ENST00000459667 STK32BQ9NY57 414 aa27.87■■■□□ 2.05
VARS-218ENST00000459667 PIGBQ92521 554 aa27.85■■■□□ 2.05
VARS-218ENST00000459667 DCAF5Q96JK2 942 aa27.85■■■□□ 2.05
VARS-218ENST00000459667 TMOD3Q9NYL9 352 aa27.85■■■□□ 2.05
VARS-218ENST00000459667 LRP5O75197 1615 aa27.85■■■□□ 2.05
VARS-218ENST00000459667 SLC15A2Q16348 729 aa27.84■■■□□ 2.05
VARS-218ENST00000459667 PALLDQ8WX93 1383 aa27.84■■■□□ 2.05
VARS-218ENST00000459667 KDM6AO15550 1401 aaPredicted RBP27.84■■■□□ 2.05
VARS-218ENST00000459667 CCNL1Q9UK58 526 aaPredicted RBP27.83■■■□□ 2.05
VARS-218ENST00000459667 NUDCQ9Y266 331 aa27.83■■■□□ 2.05
VARS-218ENST00000459667 KCNQ4P56696 695 aa27.82■■■□□ 2.04
VARS-218ENST00000459667 SMARCC1Q92922 1105 aaPredicted RBP27.81■■■□□ 2.04
VARS-218ENST00000459667 ERVV-2B6SEH9 535 aa27.8■■■□□ 2.04
VARS-218ENST00000459667 RALBP1Q15311 655 aa27.8■■■□□ 2.04
VARS-218ENST00000459667 AKAP4Q5JQC9 854 aa27.8■■■□□ 2.04
VARS-218ENST00000459667 CASZ1Q86V15 1759 aa27.8■■■□□ 2.04
VARS-218ENST00000459667 ZNF827Q17R98 1081 aa27.79■■■□□ 2.04
VARS-218ENST00000459667 MTHFSDQ2M296 383 aaKnown RBP27.78■■■□□ 2.04
VARS-218ENST00000459667 SCN11AQ9UI33 1791 aa27.78■■■□□ 2.04
VARS-218ENST00000459667 C5P01031 1676 aa27.76■■■□□ 2.03
VARS-218ENST00000459667 U2AF1L5P0DN76 240 aaPredicted RBP27.76■■■□□ 2.03
VARS-218ENST00000459667 U2AF1Q01081 240 aaKnown RBP eCLIP27.76■■■□□ 2.03
VARS-218ENST00000459667 CABP4P57796 275 aa27.75■■■□□ 2.03
VARS-218ENST00000459667 AKT1S1Q96B36 256 aa27.75■■■□□ 2.03
VARS-218ENST00000459667 ASAP1Q9ULH1 1129 aa27.75■■■□□ 2.03
VARS-218ENST00000459667 PRKAR2BP31323 418 aa27.74■■■□□ 2.03
VARS-218ENST00000459667 RSPH6AQ9H0K4 717 aa27.74■■■□□ 2.03
VARS-218ENST00000459667 VIRMAQ69YN4 1812 aaKnown RBP27.74■■■□□ 2.03
VARS-218ENST00000459667 TAF1LQ8IZX4 1826 aa27.74■■■□□ 2.03
VARS-218ENST00000459667 PDGFDQ9GZP0 370 aaPredicted RBP27.73■■■□□ 2.03
VARS-218ENST00000459667 QSER1Q2KHR3 1735 aa27.72■■■□□ 2.03
VARS-218ENST00000459667 ATG3Q9NT62 314 aa27.72■■■□□ 2.03
VARS-218ENST00000459667 TUBGCP6Q96RT7 1819 aa27.71■■■□□ 2.03
VARS-218ENST00000459667 SRCAPQ6ZRS2 3230 aa27.71■■■□□ 2.03
VARS-218ENST00000459667 GAS2L2Q8NHY3 880 aa27.71■■■□□ 2.03
VARS-218ENST00000459667 LOC102724428A0A0B4J2F2 783 aa27.7■■■□□ 2.02
VARS-218ENST00000459667 SIK1P57059 783 aa27.7■■■□□ 2.02
VARS-218ENST00000459667 ADAMTS7Q9UKP4 1686 aa27.7■■■□□ 2.02
VARS-218ENST00000459667 MYBBP1AQ9BQG0 1328 aaKnown RBP27.69■■■□□ 2.02
VARS-218ENST00000459667 RNMTO43148 476 aaKnown RBP27.69■■■□□ 2.02
VARS-218ENST00000459667 FCHSD2O94868 740 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms