RNA–Protein interactions for RNA: ENST00000458358.5

ITGA6-207, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-207ENST00000458358 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
ITGA6-207ENST00000458358 KLHL40Q2TBA0 621 aa12.24□□□□□ -0.45
ITGA6-207ENST00000458358 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.24□□□□□ -0.45
ITGA6-207ENST00000458358 PHACTR3Q96KR7 559 aa12.24□□□□□ -0.45
ITGA6-207ENST00000458358 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
ITGA6-207ENST00000458358 KIF16BQ96L93 1317 aa12.24□□□□□ -0.45
ITGA6-207ENST00000458358 FER1L4A9Z1Z3 1794 aa12.24□□□□□ -0.45
ITGA6-207ENST00000458358 SULT6B1Q6IMI4 303 aa12.24□□□□□ -0.45
ITGA6-207ENST00000458358 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
ITGA6-207ENST00000458358 C3P01024 1663 aa12.23□□□□□ -0.45
ITGA6-207ENST00000458358 FAM83GA6ND36 823 aa12.23□□□□□ -0.45
ITGA6-207ENST00000458358 USHBP1Q8N6Y0 703 aa12.22□□□□□ -0.45
ITGA6-207ENST00000458358 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
ITGA6-207ENST00000458358 MYO3AQ8NEV4 1616 aa12.22□□□□□ -0.45
ITGA6-207ENST00000458358 CD163L1Q9NR16 1453 aa12.21□□□□□ -0.45
ITGA6-207ENST00000458358 UBR1Q8IWV7 1749 aa12.2□□□□□ -0.46
ITGA6-207ENST00000458358 ZSCAN23Q3MJ62 389 aa12.2□□□□□ -0.46
ITGA6-207ENST00000458358 ZC3H6P61129 1189 aaKnown RBP12.19□□□□□ -0.46
ITGA6-207ENST00000458358 PKP1Q13835 747 aa12.19□□□□□ -0.46
ITGA6-207ENST00000458358 PLEKHF1Q96S99 279 aa12.19□□□□□ -0.46
ITGA6-207ENST00000458358 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
ITGA6-207ENST00000458358 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
ITGA6-207ENST00000458358 PRPF40AO75400 957 aaKnown RBP12.19□□□□□ -0.46
ITGA6-207ENST00000458358 CDC45O75419 566 aa12.19□□□□□ -0.46
ITGA6-207ENST00000458358 ATF3P18847 181 aa12.19□□□□□ -0.46
ITGA6-207ENST00000458358 MIS18AQ9NYP9 233 aa12.19□□□□□ -0.46
ITGA6-207ENST00000458358 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
ITGA6-207ENST00000458358 CABLES1Q8TDN4 633 aa12.18□□□□□ -0.46
ITGA6-207ENST00000458358 RBM27Q9P2N5 1060 aaKnown RBP12.18□□□□□ -0.46
ITGA6-207ENST00000458358 FOXD4L5Q5VV16 416 aaPredicted RBP12.18□□□□□ -0.46
ITGA6-207ENST00000458358 FOXD4L4Q8WXT5 416 aaPredicted RBP12.18□□□□□ -0.46
ITGA6-207ENST00000458358 UQCRHLA0A096LP55 91 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 UQCRHP07919 91 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 EIF4A2Q14240 407 aaKnown RBP12.17□□□□□ -0.46
ITGA6-207ENST00000458358 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
ITGA6-207ENST00000458358 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
ITGA6-207ENST00000458358 NUCB2P80303 420 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 NRXN3Q9Y4C0 1643 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 NSD2O96028 1365 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 FAM135BQ49AJ0 1406 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 CPS1P31327 1500 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 PLEKHG3A1L390 1219 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 ZNF445P59923 1031 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 MCM10Q7L590 875 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 CHAMP1Q96JM3 812 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 LMBRD1Q9NUN5 540 aa12.17□□□□□ -0.46
ITGA6-207ENST00000458358 IBTKQ9P2D0 1353 aaPredicted RBP12.17□□□□□ -0.46
ITGA6-207ENST00000458358 SIRT1Q96EB6 747 aa12.16□□□□□ -0.46
ITGA6-207ENST00000458358 NOL7Q9UMY1 257 aaKnown RBP12.16□□□□□ -0.46
ITGA6-207ENST00000458358 KDM4FA0A1W2PPD8 638 aa12.16□□□□□ -0.46
ITGA6-207ENST00000458358 RABEP1Q15276 862 aa12.16□□□□□ -0.46
ITGA6-207ENST00000458358 ALDH1L2Q3SY69 923 aa12.16□□□□□ -0.46
ITGA6-207ENST00000458358 EDC4Q6P2E9 1401 aaKnown RBP12.16□□□□□ -0.46
ITGA6-207ENST00000458358 CLEC17AQ6ZS10 378 aa12.15□□□□□ -0.46
ITGA6-207ENST00000458358 IL16Q14005 1332 aa12.15□□□□□ -0.46
ITGA6-207ENST00000458358 CEP170BQ9Y4F5 1589 aaPredicted RBP12.15□□□□□ -0.46
ITGA6-207ENST00000458358 APBB1O00213 710 aa12.15□□□□□ -0.46
ITGA6-207ENST00000458358 SIRT2Q8IXJ6 389 aa12.15□□□□□ -0.46
ITGA6-207ENST00000458358 RNF214Q8ND24 703 aa12.15□□□□□ -0.46
ITGA6-207ENST00000458358 IL13P35225 146 aa12.15□□□□□ -0.46
ITGA6-207ENST00000458358 HAP1P54257 671 aaPredicted RBP12.15□□□□□ -0.46
ITGA6-207ENST00000458358 ZGPATQ8N5A5 531 aaKnown RBP12.15□□□□□ -0.46
ITGA6-207ENST00000458358 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
ITGA6-207ENST00000458358 NPHP4O75161 1426 aaPredicted RBP12.15□□□□□ -0.47
ITGA6-207ENST00000458358 ADGRB2O60241 1585 aa12.15□□□□□ -0.47
ITGA6-207ENST00000458358 ATP7BP35670 1465 aa12.15□□□□□ -0.47
ITGA6-207ENST00000458358 SYCE3A1L190 88 aa12.14□□□□□ -0.47
ITGA6-207ENST00000458358 GSPT1P15170 499 aaKnown RBP12.14□□□□□ -0.47
ITGA6-207ENST00000458358 CHMP4BQ9H444 224 aaKnown RBP12.14□□□□□ -0.47
ITGA6-207ENST00000458358 FCHSD2O94868 740 aa12.13□□□□□ -0.47
ITGA6-207ENST00000458358 HS1BP3Q53T59 392 aa12.13□□□□□ -0.47
ITGA6-207ENST00000458358 TSPYL6Q8N831 410 aa12.13□□□□□ -0.47
ITGA6-207ENST00000458358 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.13□□□□□ -0.47
ITGA6-207ENST00000458358 ZNF500O60304 480 aaPredicted RBP12.13□□□□□ -0.47
ITGA6-207ENST00000458358 PTMAP06454 111 aaKnown RBP12.13□□□□□ -0.47
ITGA6-207ENST00000458358 TERF1P54274 439 aa12.13□□□□□ -0.47
ITGA6-207ENST00000458358 KRT24Q2M2I5 525 aa12.13□□□□□ -0.47
ITGA6-207ENST00000458358 C16orf71Q8IYS4 520 aaPredicted RBP12.13□□□□□ -0.47
ITGA6-207ENST00000458358 GPT2Q8TD30 523 aa12.13□□□□□ -0.47
ITGA6-207ENST00000458358 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
ITGA6-207ENST00000458358 ZKSCAN5Q9Y2L8 839 aa12.13□□□□□ -0.47
ITGA6-207ENST00000458358 USP32Q8NFA0 1604 aa12.13□□□□□ -0.47
ITGA6-207ENST00000458358 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
ITGA6-207ENST00000458358 KRT28Q7Z3Y7 464 aa12.12□□□□□ -0.47
ITGA6-207ENST00000458358 MAP7D2Q96T17 732 aa12.12□□□□□ -0.47
ITGA6-207ENST00000458358 PLEKHM2Q8IWE5 1019 aa12.12□□□□□ -0.47
ITGA6-207ENST00000458358 PDLIM2Q96JY6 352 aa12.12□□□□□ -0.47
ITGA6-207ENST00000458358 USP6P35125 1406 aa12.12□□□□□ -0.47
ITGA6-207ENST00000458358 ST18O60284 1047 aa12.12□□□□□ -0.47
ITGA6-207ENST00000458358 CHRNA2Q15822 529 aa12.12□□□□□ -0.47
ITGA6-207ENST00000458358 MPNDQ8N594 471 aa12.12□□□□□ -0.47
ITGA6-207ENST00000458358 ZNF335Q9H4Z2 1342 aaPredicted RBP12.12□□□□□ -0.47
ITGA6-207ENST00000458358 USP26Q9BXU7 913 aa12.11□□□□□ -0.47
ITGA6-207ENST00000458358 TMEM63CQ9P1W3 806 aa12.11□□□□□ -0.47
ITGA6-207ENST00000458358 ARHGAP23Q9P227 1491 aa12.11□□□□□ -0.47
ITGA6-207ENST00000458358 TECPR2O15040 1411 aa12.11□□□□□ -0.47
ITGA6-207ENST00000458358 VAMP4O75379 141 aa12.11□□□□□ -0.47
ITGA6-207ENST00000458358 DNTTIP2Q5QJE6 756 aaKnown RBP12.11□□□□□ -0.47
ITGA6-207ENST00000458358 MRPL50Q8N5N7 158 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms