RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 PEAK1Q9H792 1746 aa13.69□□□□□ -0.22
RFX3-211ENST00000458034 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
RFX3-211ENST00000458034 ACEP12821 1306 aa13.68□□□□□ -0.22
RFX3-211ENST00000458034 EIF4A2Q14240 407 aaKnown RBP13.68□□□□□ -0.22
RFX3-211ENST00000458034 LNPKQ9C0E8 428 aa13.68□□□□□ -0.22
RFX3-211ENST00000458034 SLKQ9H2G2 1235 aaPredicted RBP13.68□□□□□ -0.22
RFX3-211ENST00000458034 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
RFX3-211ENST00000458034 ANKRD45Q5TZF3 282 aa13.67□□□□□ -0.22
RFX3-211ENST00000458034 SULT6B1Q6IMI4 303 aa13.67□□□□□ -0.22
RFX3-211ENST00000458034 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
RFX3-211ENST00000458034 ANTXR1Q9H6X2 564 aa13.67□□□□□ -0.22
RFX3-211ENST00000458034 CHMP5Q9NZZ3 219 aa13.67□□□□□ -0.22
RFX3-211ENST00000458034 USP54Q70EL1 1684 aa13.66□□□□□ -0.22
RFX3-211ENST00000458034 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
RFX3-211ENST00000458034 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
RFX3-211ENST00000458034 PTPRCP08575 1304 aa13.65□□□□□ -0.22
RFX3-211ENST00000458034 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
RFX3-211ENST00000458034 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
RFX3-211ENST00000458034 SNX21Q969T3 373 aa13.65□□□□□ -0.22
RFX3-211ENST00000458034 SBNO1A3KN83 1393 aa13.65□□□□□ -0.22
RFX3-211ENST00000458034 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
RFX3-211ENST00000458034 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
RFX3-211ENST00000458034 FLT4P35916 1363 aa13.64□□□□□ -0.23
RFX3-211ENST00000458034 ELL2O00472 640 aaPredicted RBP13.64□□□□□ -0.23
RFX3-211ENST00000458034 CHL1O00533 1208 aa13.64□□□□□ -0.23
RFX3-211ENST00000458034 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
RFX3-211ENST00000458034 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
RFX3-211ENST00000458034 ANKARQ7Z5J8 1434 aa13.64□□□□□ -0.23
RFX3-211ENST00000458034 PTPRUQ92729 1446 aa13.64□□□□□ -0.23
RFX3-211ENST00000458034 L1TD1Q5T7N2 865 aaKnown RBP13.63□□□□□ -0.23
RFX3-211ENST00000458034 RGPD8O14715 1765 aaPredicted RBP13.63□□□□□ -0.23
RFX3-211ENST00000458034 FAM83GA6ND36 823 aa13.62□□□□□ -0.23
RFX3-211ENST00000458034 CDC45O75419 566 aa13.62□□□□□ -0.23
RFX3-211ENST00000458034 LTKP29376 864 aa13.62□□□□□ -0.23
RFX3-211ENST00000458034 RPAP2Q8IXW5 612 aaPredicted RBP13.62□□□□□ -0.23
RFX3-211ENST00000458034 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
RFX3-211ENST00000458034 RTF1Q92541 710 aaKnown RBP13.62□□□□□ -0.23
RFX3-211ENST00000458034 C1orf115Q9H7X2 142 aa13.62□□□□□ -0.23
RFX3-211ENST00000458034 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
RFX3-211ENST00000458034 PIK3C2AO00443 1686 aa13.61□□□□□ -0.23
RFX3-211ENST00000458034 PTMSP20962 102 aa13.61□□□□□ -0.23
RFX3-211ENST00000458034 DCTN1Q14203 1278 aa13.61□□□□□ -0.23
RFX3-211ENST00000458034 AEBP1Q8IUX7 1158 aa13.61□□□□□ -0.23
RFX3-211ENST00000458034 ANKRD44Q8N8A2 993 aa13.61□□□□□ -0.23
RFX3-211ENST00000458034 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
RFX3-211ENST00000458034 AMOTL2Q9Y2J4 779 aa13.61□□□□□ -0.23
RFX3-211ENST00000458034 CRB1P82279 1406 aa13.61□□□□□ -0.23
RFX3-211ENST00000458034 NCOA3Q9Y6Q9 1424 aa13.61□□□□□ -0.23
RFX3-211ENST00000458034 HTATSF1O43719 755 aaKnown RBP13.6□□□□□ -0.23
RFX3-211ENST00000458034 THEMISQ8N1K5 641 aaPredicted RBP13.6□□□□□ -0.23
RFX3-211ENST00000458034 DCTPP1Q9H773 170 aa13.6□□□□□ -0.23
RFX3-211ENST00000458034 N4BP2Q86UW6 1770 aaPredicted RBP13.6□□□□□ -0.23
RFX3-211ENST00000458034 SOS1Q07889 1333 aaPredicted RBP13.6□□□□□ -0.23
RFX3-211ENST00000458034 KDRP35968 1356 aa13.59□□□□□ -0.23
RFX3-211ENST00000458034 DDX11L8A8MPP1 907 aa13.59□□□□□ -0.23
RFX3-211ENST00000458034 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
RFX3-211ENST00000458034 NGDNQ8NEJ9 315 aaKnown RBP13.59□□□□□ -0.23
RFX3-211ENST00000458034 RTL1A6NKG5 1358 aa13.58□□□□□ -0.23
RFX3-211ENST00000458034 RGS12O14924 1447 aa13.58□□□□□ -0.24
RFX3-211ENST00000458034 HMMRO75330 724 aa13.58□□□□□ -0.24
RFX3-211ENST00000458034 MCM4P33991 863 aa13.58□□□□□ -0.24
RFX3-211ENST00000458034 AMPHP49418 695 aa13.58□□□□□ -0.24
RFX3-211ENST00000458034 HSP90AB2PQ58FF8 381 aa13.58□□□□□ -0.24
RFX3-211ENST00000458034 CASC1Q6TDU7 716 aa13.58□□□□□ -0.24
RFX3-211ENST00000458034 SIRT2Q8IXJ6 389 aa13.58□□□□□ -0.24
RFX3-211ENST00000458034 FAM208AQ9UK61 1670 aaKnown RBP13.58□□□□□ -0.24
RFX3-211ENST00000458034 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.24
RFX3-211ENST00000458034 ATP10DQ9P241 1426 aa13.57□□□□□ -0.24
RFX3-211ENST00000458034 CCT4P50991 539 aaKnown RBP13.57□□□□□ -0.24
RFX3-211ENST00000458034 TBC1D9Q6ZT07 1266 aa13.57□□□□□ -0.24
RFX3-211ENST00000458034 MCM10Q7L590 875 aa13.57□□□□□ -0.24
RFX3-211ENST00000458034 SLC26A8Q96RN1 970 aa13.57□□□□□ -0.24
RFX3-211ENST00000458034 TSPYL4Q9UJ04 414 aa13.57□□□□□ -0.24
RFX3-211ENST00000458034 IGSF1Q8N6C5 1336 aa13.57□□□□□ -0.24
RFX3-211ENST00000458034 MSH6P52701 1360 aa13.57□□□□□ -0.24
RFX3-211ENST00000458034 NUTM2FA1L443 756 aa13.56□□□□□ -0.24
RFX3-211ENST00000458034 MARF1Q9Y4F3 1742 aaKnown RBP13.56□□□□□ -0.24
RFX3-211ENST00000458034 TTC22Q5TAA0 569 aa13.55□□□□□ -0.24
RFX3-211ENST00000458034 CEP85Q6P2H3 762 aa13.55□□□□□ -0.24
RFX3-211ENST00000458034 PLEKHM2Q8IWE5 1019 aa13.55□□□□□ -0.24
RFX3-211ENST00000458034 STK31Q9BXU1 1019 aa13.55□□□□□ -0.24
RFX3-211ENST00000458034 BABAM1Q9NWV8 329 aa13.55□□□□□ -0.24
RFX3-211ENST00000458034 SPRYD3Q8NCJ5 442 aa13.54□□□□□ -0.24
RFX3-211ENST00000458034 GBP4Q96PP9 640 aa13.54□□□□□ -0.24
RFX3-211ENST00000458034 CEP170BQ9Y4F5 1589 aaPredicted RBP13.54□□□□□ -0.24
RFX3-211ENST00000458034 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
RFX3-211ENST00000458034 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
RFX3-211ENST00000458034 RABEP1Q15276 862 aa13.53□□□□□ -0.24
RFX3-211ENST00000458034 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
RFX3-211ENST00000458034 PXDNLA1KZ92 1463 aa13.53□□□□□ -0.24
RFX3-211ENST00000458034 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
RFX3-211ENST00000458034 SOX12O15370 315 aa13.52□□□□□ -0.25
RFX3-211ENST00000458034 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
RFX3-211ENST00000458034 PRKAR2AP13861 404 aaKnown RBP13.52□□□□□ -0.25
RFX3-211ENST00000458034 CEBPAP49715 358 aaPredicted RBP13.52□□□□□ -0.25
RFX3-211ENST00000458034 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
RFX3-211ENST00000458034 CCDC30Q5VVM6 783 aa13.52□□□□□ -0.25
RFX3-211ENST00000458034 IL27Q8NEV9 243 aa13.52□□□□□ -0.25
RFX3-211ENST00000458034 CHMP4AQ9BY43 222 aa13.52□□□□□ -0.25
RFX3-211ENST00000458034 LTN1O94822 1766 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms