RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 PAPPAQ13219 1627 aa20.42■□□□□ 0.86
UPF3AP2-201ENST00000457924 TMC1Q8TDI8 760 aa20.41■□□□□ 0.86
UPF3AP2-201ENST00000457924 ANKRD24Q8TF21 1146 aa20.41■□□□□ 0.86
UPF3AP2-201ENST00000457924 SBNO2Q9Y2G9 1366 aa20.41■□□□□ 0.86
UPF3AP2-201ENST00000457924 HDGFL2Q7Z4V5 671 aaPredicted RBP20.4■□□□□ 0.86
UPF3AP2-201ENST00000457924 REM2Q8IYK8 340 aaPredicted RBP20.4■□□□□ 0.86
UPF3AP2-201ENST00000457924 CD163L1Q9NR16 1453 aa20.39■□□□□ 0.85
UPF3AP2-201ENST00000457924 EDC4Q6P2E9 1401 aaKnown RBP20.36■□□□□ 0.85
UPF3AP2-201ENST00000457924 MAP3K5Q99683 1374 aa20.36■□□□□ 0.85
UPF3AP2-201ENST00000457924 ZNF827Q17R98 1081 aa20.36■□□□□ 0.85
UPF3AP2-201ENST00000457924 CARD11Q9BXL7 1154 aa20.36■□□□□ 0.85
UPF3AP2-201ENST00000457924 SLC12A5Q9H2X9 1139 aa20.36■□□□□ 0.85
UPF3AP2-201ENST00000457924 TERF2IPQ9NYB0 399 aa20.36■□□□□ 0.85
UPF3AP2-201ENST00000457924 LRRC4BQ9NT99 713 aa20.35■□□□□ 0.85
UPF3AP2-201ENST00000457924 UTRNP46939 3433 aa20.34■□□□□ 0.85
UPF3AP2-201ENST00000457924 SLC27A3Q5K4L6 730 aa20.34■□□□□ 0.85
UPF3AP2-201ENST00000457924 DDX54Q8TDD1 881 aaKnown RBP20.34■□□□□ 0.85
UPF3AP2-201ENST00000457924 QSER1Q2KHR3 1735 aa20.33■□□□□ 0.85
UPF3AP2-201ENST00000457924 FAM208AQ9UK61 1670 aaKnown RBP20.33■□□□□ 0.85
UPF3AP2-201ENST00000457924 SLC16A10Q8TF71 515 aa20.33■□□□□ 0.85
UPF3AP2-201ENST00000457924 GPR162Q16538 588 aa20.32■□□□□ 0.84
UPF3AP2-201ENST00000457924 IP6K1Q92551 441 aa20.32■□□□□ 0.84
UPF3AP2-201ENST00000457924 A0A1W2PP64 1363 aa20.32■□□□□ 0.84
UPF3AP2-201ENST00000457924 POLD1P28340 1107 aa20.31■□□□□ 0.84
UPF3AP2-201ENST00000457924 KLHL34Q8N239 644 aa20.31■□□□□ 0.84
UPF3AP2-201ENST00000457924 LTV1Q96GA3 475 aaPredicted RBP20.31■□□□□ 0.84
UPF3AP2-201ENST00000457924 SYTL4Q96C24 671 aaPredicted RBP20.29■□□□□ 0.84
UPF3AP2-201ENST00000457924 PUS7Q96PZ0 661 aaKnown RBP20.29■□□□□ 0.84
UPF3AP2-201ENST00000457924 SENP3-EIF4A1A0A087X0R7 540 aa20.28■□□□□ 0.84
UPF3AP2-201ENST00000457924 C1QTNF8P60827 252 aa20.28■□□□□ 0.84
UPF3AP2-201ENST00000457924 TFCP2L1Q9NZI6 479 aa20.28■□□□□ 0.84
UPF3AP2-201ENST00000457924 PNPLA7Q6ZV29 1317 aa20.27■□□□□ 0.84
UPF3AP2-201ENST00000457924 COL24A1Q17RW2 1714 aa20.27■□□□□ 0.83
UPF3AP2-201ENST00000457924 ANKRD36BQ8N2N9 1353 aa20.26■□□□□ 0.83
UPF3AP2-201ENST00000457924 TUBGCP6Q96RT7 1819 aa20.26■□□□□ 0.83
UPF3AP2-201ENST00000457924 PRIM1P49642 420 aaKnown RBP20.26■□□□□ 0.83
UPF3AP2-201ENST00000457924 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
UPF3AP2-201ENST00000457924 COG3Q96JB2 828 aa20.26■□□□□ 0.83
UPF3AP2-201ENST00000457924 DOT1LQ8TEK3 1739 aa20.26■□□□□ 0.83
UPF3AP2-201ENST00000457924 LY75O60449 1722 aa20.25■□□□□ 0.83
UPF3AP2-201ENST00000457924 AMPHP49418 695 aa20.24■□□□□ 0.83
UPF3AP2-201ENST00000457924 KCNQ4P56696 695 aa20.24■□□□□ 0.83
UPF3AP2-201ENST00000457924 MAP3K19Q56UN5 1328 aa20.24■□□□□ 0.83
UPF3AP2-201ENST00000457924 HOXC9P31274 260 aa20.23■□□□□ 0.83
UPF3AP2-201ENST00000457924 ZCRB1Q8TBF4 217 aaKnown RBP20.23■□□□□ 0.83
UPF3AP2-201ENST00000457924 RGPD2P0DJD1 1756 aa20.23■□□□□ 0.83
UPF3AP2-201ENST00000457924 SHANK3Q9BYB0 1731 aa20.22■□□□□ 0.83
UPF3AP2-201ENST00000457924 CCNL1Q9UK58 526 aaPredicted RBP20.21■□□□□ 0.83
UPF3AP2-201ENST00000457924 NSD2O96028 1365 aa20.21■□□□□ 0.83
UPF3AP2-201ENST00000457924 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
UPF3AP2-201ENST00000457924 GIGYF1O75420 1035 aaPredicted RBP20.2■□□□□ 0.82
UPF3AP2-201ENST00000457924 FBLN1P23142 703 aa20.19■□□□□ 0.82
UPF3AP2-201ENST00000457924 SPDYE1Q8NFV5 336 aaPredicted RBP20.19■□□□□ 0.82
UPF3AP2-201ENST00000457924 NLGN2Q8NFZ4 835 aa20.19■□□□□ 0.82
UPF3AP2-201ENST00000457924 MEGF6O75095 1541 aa20.18■□□□□ 0.82
UPF3AP2-201ENST00000457924 SLC24A1O60721 1099 aa20.18■□□□□ 0.82
UPF3AP2-201ENST00000457924 USP47Q96K76 1375 aa20.18■□□□□ 0.82
UPF3AP2-201ENST00000457924 PITPNM1O00562 1244 aa20.17■□□□□ 0.82
UPF3AP2-201ENST00000457924 TESK2Q96S53 571 aa20.17■□□□□ 0.82
UPF3AP2-201ENST00000457924 RTL1A6NKG5 1358 aa20.17■□□□□ 0.82
UPF3AP2-201ENST00000457924 GRIN3BO60391 1043 aa20.16■□□□□ 0.82
UPF3AP2-201ENST00000457924 CGNL1Q0VF96 1302 aa20.16■□□□□ 0.82
UPF3AP2-201ENST00000457924 ST20-MTHFSA0A0A6YYL1 179 aa20.15■□□□□ 0.82
UPF3AP2-201ENST00000457924 NBPF6Q5VWK0 638 aa20.15■□□□□ 0.82
UPF3AP2-201ENST00000457924 COL23A1Q86Y22 540 aaPredicted RBP20.15■□□□□ 0.82
UPF3AP2-201ENST00000457924 RAPGEF4Q8WZA2 1011 aa20.15■□□□□ 0.82
UPF3AP2-201ENST00000457924 NBPF4Q96M43 638 aa20.15■□□□□ 0.82
UPF3AP2-201ENST00000457924 SMG6Q86US8 1419 aaKnown RBP20.15■□□□□ 0.82
UPF3AP2-201ENST00000457924 HMGB2P26583 209 aaKnown RBP20.14■□□□□ 0.81
UPF3AP2-201ENST00000457924 RRS1Q15050 365 aaKnown RBP20.13■□□□□ 0.81
UPF3AP2-201ENST00000457924 YBX3P16989 372 aaKnown RBP eCLIP20.12■□□□□ 0.81
UPF3AP2-201ENST00000457924 TATP17735 454 aaPredicted RBP20.12■□□□□ 0.81
UPF3AP2-201ENST00000457924 USHBP1Q8N6Y0 703 aa20.12■□□□□ 0.81
UPF3AP2-201ENST00000457924 C5P01031 1676 aa20.12■□□□□ 0.81
UPF3AP2-201ENST00000457924 MSL1Q68DK7 614 aa20.11■□□□□ 0.81
UPF3AP2-201ENST00000457924 PCDH11XQ9BZA7 1347 aa20.1■□□□□ 0.81
UPF3AP2-201ENST00000457924 PCDH11YQ9BZA8 1340 aa20.1■□□□□ 0.81
UPF3AP2-201ENST00000457924 FYB1O15117 783 aa20.1■□□□□ 0.81
UPF3AP2-201ENST00000457924 FLAD1Q8NFF5 587 aa20.1■□□□□ 0.81
UPF3AP2-201ENST00000457924 GGNBP2Q9H3C7 697 aa20.1■□□□□ 0.81
UPF3AP2-201ENST00000457924 GOLGB1Q14789 3259 aaKnown RBP20.08■□□□□ 0.81
UPF3AP2-201ENST00000457924 CLEC11AQ9Y240 323 aa20.08■□□□□ 0.81
UPF3AP2-201ENST00000457924 TAF1LQ8IZX4 1826 aa20.08■□□□□ 0.8
UPF3AP2-201ENST00000457924 MPRIPQ6WCQ1 1025 aa20.07■□□□□ 0.8
UPF3AP2-201ENST00000457924 CD2APQ9Y5K6 639 aa20.07■□□□□ 0.8
UPF3AP2-201ENST00000457924 INSRP06213 1382 aa20.07■□□□□ 0.8
UPF3AP2-201ENST00000457924 PALLDQ8WX93 1383 aa20.07■□□□□ 0.8
UPF3AP2-201ENST00000457924 TMF1P82094 1093 aa20.06■□□□□ 0.8
UPF3AP2-201ENST00000457924 HSP90AB2PQ58FF8 381 aa20.06■□□□□ 0.8
UPF3AP2-201ENST00000457924 KIF20BQ96Q89 1820 aa20.05■□□□□ 0.8
UPF3AP2-201ENST00000457924 FLT4P35916 1363 aa20.05■□□□□ 0.8
UPF3AP2-201ENST00000457924 KIF24Q5T7B8 1368 aa20.04■□□□□ 0.8
UPF3AP2-201ENST00000457924 ITGB4P16144 1822 aa20.04■□□□□ 0.8
UPF3AP2-201ENST00000457924 C4BP0C0L5 1744 aa20.03■□□□□ 0.8
UPF3AP2-201ENST00000457924 SMARCC1Q92922 1105 aaPredicted RBP20.03■□□□□ 0.8
UPF3AP2-201ENST00000457924 AK7Q96M32 723 aa20.03■□□□□ 0.8
UPF3AP2-201ENST00000457924 ATP10DQ9P241 1426 aa20.02■□□□□ 0.8
UPF3AP2-201ENST00000457924 CYP27B1O15528 508 aa20.01■□□□□ 0.79
UPF3AP2-201ENST00000457924 FBXO3Q9UK99 471 aa20.01■□□□□ 0.79
UPF3AP2-201ENST00000457924 TOGARAM1Q9Y4F4 1720 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms