RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 UGGT1Q9NYU2 1555 aa19.83■□□□□ 0.77
LSS-205ENST00000457828 NSD2O96028 1365 aa19.83■□□□□ 0.76
LSS-205ENST00000457828 ISY1Q9ULR0 285 aaKnown RBP19.83■□□□□ 0.76
LSS-205ENST00000457828 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.83■□□□□ 0.76
LSS-205ENST00000457828 ADGBQ8N7X0 1667 aa19.83■□□□□ 0.76
LSS-205ENST00000457828 CHAF1AQ13111 956 aaPredicted RBP19.82■□□□□ 0.76
LSS-205ENST00000457828 PUS7Q96PZ0 661 aaKnown RBP19.82■□□□□ 0.76
LSS-205ENST00000457828 CCDC173Q0VFZ6 552 aa19.82■□□□□ 0.76
LSS-205ENST00000457828 TMOD3Q9NYL9 352 aa19.82■□□□□ 0.76
LSS-205ENST00000457828 RABEP1Q15276 862 aa19.82■□□□□ 0.76
LSS-205ENST00000457828 DRC7Q8IY82 874 aa19.81■□□□□ 0.76
LSS-205ENST00000457828 ABCC11Q96J66 1382 aa19.81■□□□□ 0.76
LSS-205ENST00000457828 NEK4P51957 841 aa19.81■□□□□ 0.76
LSS-205ENST00000457828 ZNF521Q96K83 1311 aa19.8■□□□□ 0.76
LSS-205ENST00000457828 METP08581 1390 aa19.8■□□□□ 0.76
LSS-205ENST00000457828 MPNDQ8N594 471 aa19.8■□□□□ 0.76
LSS-205ENST00000457828 EFCAB6Q5THR3 1501 aa19.8■□□□□ 0.76
LSS-205ENST00000457828 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
LSS-205ENST00000457828 A0A1W2PP64 1363 aa19.79■□□□□ 0.76
LSS-205ENST00000457828 KIF6Q6ZMV9 814 aa19.79■□□□□ 0.76
LSS-205ENST00000457828 ERVK-7P63135 1459 aa19.79■□□□□ 0.76
LSS-205ENST00000457828 INSRP06213 1382 aa19.79■□□□□ 0.76
LSS-205ENST00000457828 POLKQ9UBT6 870 aa19.79■□□□□ 0.76
LSS-205ENST00000457828 TMEM94Q12767 1356 aa19.79■□□□□ 0.76
LSS-205ENST00000457828 POLR3AO14802 1390 aaPredicted RBP19.79■□□□□ 0.76
LSS-205ENST00000457828 UBE2Q2Q8WVN8 375 aa19.78■□□□□ 0.76
LSS-205ENST00000457828 PPP1R1BQ9UD71 204 aaPredicted RBP19.78■□□□□ 0.76
LSS-205ENST00000457828 ABCA9Q8IUA7 1624 aa19.78■□□□□ 0.76
LSS-205ENST00000457828 UBTFL1P0CB47 393 aaPredicted RBP19.78■□□□□ 0.76
LSS-205ENST00000457828 HDAC1Q13547 482 aaPredicted RBP19.77■□□□□ 0.76
LSS-205ENST00000457828 TBC1D9Q6ZT07 1266 aa19.77■□□□□ 0.76
LSS-205ENST00000457828 TRPM2O94759 1503 aa19.77■□□□□ 0.76
LSS-205ENST00000457828 EIF2AK4Q9P2K8 1649 aaKnown RBP19.77■□□□□ 0.76
LSS-205ENST00000457828 NPHP4O75161 1426 aaPredicted RBP19.77■□□□□ 0.76
LSS-205ENST00000457828 LRRIQ1Q96JM4 1722 aa19.77■□□□□ 0.75
LSS-205ENST00000457828 PHF14O94880 888 aa19.76■□□□□ 0.75
LSS-205ENST00000457828 CLCN1P35523 988 aa19.76■□□□□ 0.75
LSS-205ENST00000457828 G3BP1Q13283 466 aaKnown RBP eCLIP19.76■□□□□ 0.75
LSS-205ENST00000457828 TAF7Q15545 349 aaPredicted RBP19.76■□□□□ 0.75
LSS-205ENST00000457828 IFNL2Q8IZJ0 200 aa19.76■□□□□ 0.75
LSS-205ENST00000457828 ZNF335Q9H4Z2 1342 aaPredicted RBP19.75■□□□□ 0.75
LSS-205ENST00000457828 AEBP1Q8IUX7 1158 aa19.75■□□□□ 0.75
LSS-205ENST00000457828 PRDM15P57071 1507 aaPredicted RBP19.75■□□□□ 0.75
LSS-205ENST00000457828 TRMT2AQ8IZ69 625 aaKnown RBP19.74■□□□□ 0.75
LSS-205ENST00000457828 PLEKHG1Q9ULL1 1385 aa19.74■□□□□ 0.75
LSS-205ENST00000457828 ABCC3O15438 1527 aa19.74■□□□□ 0.75
LSS-205ENST00000457828 TPM2P07951 284 aa19.74■□□□□ 0.75
LSS-205ENST00000457828 EIF4A2Q14240 407 aaKnown RBP19.74■□□□□ 0.75
LSS-205ENST00000457828 BMP2KLQ5H9B9 411 aa19.74■□□□□ 0.75
LSS-205ENST00000457828 MAP3K19Q56UN5 1328 aa19.73■□□□□ 0.75
LSS-205ENST00000457828 FAM83GA6ND36 823 aa19.73■□□□□ 0.75
LSS-205ENST00000457828 RRP9O43818 475 aaKnown RBP19.73■□□□□ 0.75
LSS-205ENST00000457828 BTG4Q9NY30 223 aa19.73■□□□□ 0.75
LSS-205ENST00000457828 NUCB1Q02818 461 aa19.73■□□□□ 0.75
LSS-205ENST00000457828 NLRP1Q9C000 1473 aa19.72■□□□□ 0.75
LSS-205ENST00000457828 SMARCA5O60264 1052 aaPredicted RBP19.72■□□□□ 0.75
LSS-205ENST00000457828 STARD3NLO95772 234 aa19.72■□□□□ 0.75
LSS-205ENST00000457828 ZSCAN30Q86W11 494 aa19.72■□□□□ 0.75
LSS-205ENST00000457828 PKNOX2Q96KN3 472 aa19.72■□□□□ 0.75
LSS-205ENST00000457828 ZRSR1Q15695 479 aaKnown RBP19.72■□□□□ 0.75
LSS-205ENST00000457828 VPS37DQ86XT2 251 aa19.72■□□□□ 0.75
LSS-205ENST00000457828 CCDC27Q2M243 656 aa19.71■□□□□ 0.75
LSS-205ENST00000457828 ZCRB1Q8TBF4 217 aaKnown RBP19.71■□□□□ 0.75
LSS-205ENST00000457828 ALDH1L2Q3SY69 923 aa19.7■□□□□ 0.74
LSS-205ENST00000457828 BICDL1Q6ZP65 573 aa19.7■□□□□ 0.74
LSS-205ENST00000457828 SIRT1Q96EB6 747 aa19.7■□□□□ 0.74
LSS-205ENST00000457828 GNAI3P08754 354 aa19.69■□□□□ 0.74
LSS-205ENST00000457828 IFIT2P09913 472 aaKnown RBP19.69■□□□□ 0.74
LSS-205ENST00000457828 SMC5Q8IY18 1101 aa19.69■□□□□ 0.74
LSS-205ENST00000457828 NPC1L1Q9UHC9 1359 aa19.69■□□□□ 0.74
LSS-205ENST00000457828 BAG4O95429 457 aaKnown RBP19.69■□□□□ 0.74
LSS-205ENST00000457828 DDB1Q16531 1140 aa19.69■□□□□ 0.74
LSS-205ENST00000457828 SYCE3A1L190 88 aa19.69■□□□□ 0.74
LSS-205ENST00000457828 PTPRTO14522 1441 aa19.68■□□□□ 0.74
LSS-205ENST00000457828 PLEKHG3A1L390 1219 aa19.68■□□□□ 0.74
LSS-205ENST00000457828 NEUROD6Q96NK8 337 aa19.68■□□□□ 0.74
LSS-205ENST00000457828 FLT4P35916 1363 aa19.68■□□□□ 0.74
LSS-205ENST00000457828 USP19O94966 1318 aa19.68■□□□□ 0.74
LSS-205ENST00000457828 CSPP1Q1MSJ5 1256 aa19.68■□□□□ 0.74
LSS-205ENST00000457828 ACSBG1Q96GR2 724 aa19.68■□□□□ 0.74
LSS-205ENST00000457828 CDC42BPBQ9Y5S2 1711 aa19.68■□□□□ 0.74
LSS-205ENST00000457828 ZBTB40Q9NUA8 1239 aa19.68■□□□□ 0.74
LSS-205ENST00000457828 PLA2R1Q13018 1463 aa19.68■□□□□ 0.74
LSS-205ENST00000457828 SRCIN1Q9C0H9 1055 aa19.67■□□□□ 0.74
LSS-205ENST00000457828 ERC2O15083 957 aa19.67■□□□□ 0.74
LSS-205ENST00000457828 EYA1Q99502 592 aa19.67■□□□□ 0.74
LSS-205ENST00000457828 FBXW7Q969H0 707 aa19.66■□□□□ 0.74
LSS-205ENST00000457828 CWC22Q9HCG8 908 aaKnown RBP19.66■□□□□ 0.74
LSS-205ENST00000457828 ARHGAP31Q2M1Z3 1444 aa19.66■□□□□ 0.74
LSS-205ENST00000457828 MBD3O95983 291 aa19.66■□□□□ 0.74
LSS-205ENST00000457828 IP6K1Q92551 441 aa19.66■□□□□ 0.74
LSS-205ENST00000457828 TOMM22Q9NS69 142 aa19.66■□□□□ 0.74
LSS-205ENST00000457828 CCDC39Q9UFE4 941 aa19.66■□□□□ 0.74
LSS-205ENST00000457828 ROBO2Q9HCK4 1378 aa19.65■□□□□ 0.74
LSS-205ENST00000457828 HOXC9P31274 260 aa19.65■□□□□ 0.74
LSS-205ENST00000457828 SURF6O75683 361 aaKnown RBP19.65■□□□□ 0.74
LSS-205ENST00000457828 IL2RBP14784 551 aa19.65■□□□□ 0.74
LSS-205ENST00000457828 IFT57Q9NWB7 429 aa19.65■□□□□ 0.74
LSS-205ENST00000457828 RBM27Q9P2N5 1060 aaKnown RBP19.64■□□□□ 0.73
LSS-205ENST00000457828 EXOC6BQ9Y2D4 811 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms