RNA–Protein interactions for RNA: ENST00000456976.5

DDX39B-213, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-213ENST00000456976 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
DDX39B-213ENST00000456976 KAT6BQ8WYB5 2073 aa17.39■□□□□ 0.37
DDX39B-213ENST00000456976 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
DDX39B-213ENST00000456976 TRPM1Q7Z4N2 1603 aa17.38■□□□□ 0.37
DDX39B-213ENST00000456976 SMC1BQ8NDV3 1235 aa17.37■□□□□ 0.37
DDX39B-213ENST00000456976 KDM2BQ8NHM5 1336 aa17.36■□□□□ 0.37
DDX39B-213ENST00000456976 BCS1LQ9Y276 419 aa17.35■□□□□ 0.37
DDX39B-213ENST00000456976 ANKRD36BQ8N2N9 1353 aa17.35■□□□□ 0.37
DDX39B-213ENST00000456976 ERBB3P21860 1342 aa17.34■□□□□ 0.37
DDX39B-213ENST00000456976 USP47Q96K76 1375 aa17.34■□□□□ 0.37
DDX39B-213ENST00000456976 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
DDX39B-213ENST00000456976 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
DDX39B-213ENST00000456976 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
DDX39B-213ENST00000456976 ANKRD24Q8TF21 1146 aa17.32■□□□□ 0.36
DDX39B-213ENST00000456976 TUBGCP6Q96RT7 1819 aa17.32■□□□□ 0.36
DDX39B-213ENST00000456976 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
DDX39B-213ENST00000456976 C9orf131Q5VYM1 1079 aa17.31■□□□□ 0.36
DDX39B-213ENST00000456976 RAB3GAP2Q9H2M9 1393 aa17.3■□□□□ 0.36
DDX39B-213ENST00000456976 PLEKHG2Q9H7P9 1386 aa17.3■□□□□ 0.36
DDX39B-213ENST00000456976 TTC21AQ8NDW8 1320 aa17.3■□□□□ 0.36
DDX39B-213ENST00000456976 TGFB2P61812 414 aa17.3■□□□□ 0.36
DDX39B-213ENST00000456976 AK7Q96M32 723 aa17.29■□□□□ 0.36
DDX39B-213ENST00000456976 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
DDX39B-213ENST00000456976 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
DDX39B-213ENST00000456976 RGPD5Q99666 1765 aa17.28■□□□□ 0.36
DDX39B-213ENST00000456976 FCHSD2O94868 740 aa17.27■□□□□ 0.36
DDX39B-213ENST00000456976 NSD2O96028 1365 aa17.26■□□□□ 0.35
DDX39B-213ENST00000456976 C10orf71Q711Q0 1435 aa17.25■□□□□ 0.35
DDX39B-213ENST00000456976 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
DDX39B-213ENST00000456976 PHF14O94880 888 aa17.25■□□□□ 0.35
DDX39B-213ENST00000456976 CENPJQ9HC77 1338 aaPredicted RBP17.24■□□□□ 0.35
DDX39B-213ENST00000456976 PIK3C2AO00443 1686 aa17.24■□□□□ 0.35
DDX39B-213ENST00000456976 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.24■□□□□ 0.35
DDX39B-213ENST00000456976 MLLT1Q03111 559 aaPredicted RBP17.24■□□□□ 0.35
DDX39B-213ENST00000456976 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
DDX39B-213ENST00000456976 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
DDX39B-213ENST00000456976 KCPQ6ZWJ8 1503 aa17.22■□□□□ 0.35
DDX39B-213ENST00000456976 LY75O60449 1722 aa17.22■□□□□ 0.35
DDX39B-213ENST00000456976 NFAT5O94916 1531 aa17.21■□□□□ 0.35
DDX39B-213ENST00000456976 FOXN1O15353 648 aa17.21■□□□□ 0.35
DDX39B-213ENST00000456976 SSFA2P28290 1259 aa17.21■□□□□ 0.35
DDX39B-213ENST00000456976 CTCFP49711 727 aaPredicted RBP17.21■□□□□ 0.35
DDX39B-213ENST00000456976 AIDAQ96BJ3 306 aa17.21■□□□□ 0.35
DDX39B-213ENST00000456976 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
DDX39B-213ENST00000456976 MMP10P09238 476 aa17.2■□□□□ 0.34
DDX39B-213ENST00000456976 VEGFAP15692 232 aaPredicted RBP17.2■□□□□ 0.34
DDX39B-213ENST00000456976 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
DDX39B-213ENST00000456976 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
DDX39B-213ENST00000456976 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
DDX39B-213ENST00000456976 ABHD8Q96I13 439 aa17.19■□□□□ 0.34
DDX39B-213ENST00000456976 EVC2Q86UK5 1308 aa17.19■□□□□ 0.34
DDX39B-213ENST00000456976 DPEP1P16444 411 aa17.18■□□□□ 0.34
DDX39B-213ENST00000456976 NBPF1Q3BBV0 1214 aa17.18■□□□□ 0.34
DDX39B-213ENST00000456976 SMARCC1Q92922 1105 aaPredicted RBP17.18■□□□□ 0.34
DDX39B-213ENST00000456976 LTV1Q96GA3 475 aaPredicted RBP17.18■□□□□ 0.34
DDX39B-213ENST00000456976 AMIGO3Q86WK7 504 aa17.17■□□□□ 0.34
DDX39B-213ENST00000456976 QRICH2Q9H0J4 1663 aa17.16■□□□□ 0.34
DDX39B-213ENST00000456976 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
DDX39B-213ENST00000456976 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
DDX39B-213ENST00000456976 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
DDX39B-213ENST00000456976 MKRN1Q9UHC7 482 aaKnown RBP17.16■□□□□ 0.34
DDX39B-213ENST00000456976 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
DDX39B-213ENST00000456976 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
DDX39B-213ENST00000456976 IP6K1Q92551 441 aa17.15■□□□□ 0.34
DDX39B-213ENST00000456976 CREBZFQ9NS37 354 aa17.15■□□□□ 0.34
DDX39B-213ENST00000456976 PIM2Q9P1W9 311 aa17.15■□□□□ 0.34
DDX39B-213ENST00000456976 NLGN1Q8N2Q7 840 aa17.14■□□□□ 0.33
DDX39B-213ENST00000456976 USP31Q70CQ4 1352 aa17.14■□□□□ 0.33
DDX39B-213ENST00000456976 RGS19P49795 217 aa17.13■□□□□ 0.33
DDX39B-213ENST00000456976 DALRD3Q5D0E6 543 aaKnown RBP17.13■□□□□ 0.33
DDX39B-213ENST00000456976 TMF1P82094 1093 aa17.12■□□□□ 0.33
DDX39B-213ENST00000456976 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
DDX39B-213ENST00000456976 GLTPD2A6NH11 291 aa17.11■□□□□ 0.33
DDX39B-213ENST00000456976 CCDC85CA6NKD9 419 aa17.11■□□□□ 0.33
DDX39B-213ENST00000456976 LBX1P52954 281 aa17.11■□□□□ 0.33
DDX39B-213ENST00000456976 DCAF5Q96JK2 942 aa17.11■□□□□ 0.33
DDX39B-213ENST00000456976 C5P01031 1676 aa17.1■□□□□ 0.33
DDX39B-213ENST00000456976 DOT1LQ8TEK3 1739 aa17.1■□□□□ 0.33
DDX39B-213ENST00000456976 GNPATO15228 680 aa17.1■□□□□ 0.33
DDX39B-213ENST00000456976 KCNA3P22001 575 aa17.1■□□□□ 0.33
DDX39B-213ENST00000456976 NME9Q86XW9 330 aa17.1■□□□□ 0.33
DDX39B-213ENST00000456976 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
DDX39B-213ENST00000456976 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
DDX39B-213ENST00000456976 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
DDX39B-213ENST00000456976 TRAPPC3LQ5T215 181 aa17.08■□□□□ 0.32
DDX39B-213ENST00000456976 C4BP0C0L5 1744 aa17.07■□□□□ 0.32
DDX39B-213ENST00000456976 RAPGEF4Q8WZA2 1011 aa17.07■□□□□ 0.32
DDX39B-213ENST00000456976 TNRC6CQ9HCJ0 1690 aaKnown RBP17.07■□□□□ 0.32
DDX39B-213ENST00000456976 LOC102724428A0A0B4J2F2 783 aa17.06■□□□□ 0.32
DDX39B-213ENST00000456976 SIK1P57059 783 aa17.06■□□□□ 0.32
DDX39B-213ENST00000456976 LINC00116Q8NCU8 138 aa17.06■□□□□ 0.32
DDX39B-213ENST00000456976 WBP1LQ9NX94 342 aa17.05■□□□□ 0.32
DDX39B-213ENST00000456976 CNTNAP1P78357 1384 aa17.04■□□□□ 0.32
DDX39B-213ENST00000456976 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
DDX39B-213ENST00000456976 DPY19L2Q6NUT2 758 aa17.04■□□□□ 0.32
DDX39B-213ENST00000456976 RTCBQ9Y3I0 505 aaKnown RBP17.04■□□□□ 0.32
DDX39B-213ENST00000456976 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
DDX39B-213ENST00000456976 PCDH11XQ9BZA7 1347 aa17.03■□□□□ 0.32
DDX39B-213ENST00000456976 PCDH11YQ9BZA8 1340 aa17.03■□□□□ 0.32
DDX39B-213ENST00000456976 LMNB1P20700 586 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms