RNA–Protein interactions for RNA: ENST00000456708.5

ATG9A-217, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-217ENST00000456708 NPC1L1Q9UHC9 1359 aa24.07■■□□□ 1.44
ATG9A-217ENST00000456708 ACSBG1Q96GR2 724 aa24.06■■□□□ 1.44
ATG9A-217ENST00000456708 CAMKK2Q96RR4 588 aa24.06■■□□□ 1.44
ATG9A-217ENST00000456708 BCL11BQ9C0K0 894 aaPredicted RBP24.06■■□□□ 1.44
ATG9A-217ENST00000456708 NCAPD2Q15021 1401 aa24.05■■□□□ 1.44
ATG9A-217ENST00000456708 ZEB1P37275 1124 aaPredicted RBP24.04■■□□□ 1.44
ATG9A-217ENST00000456708 KCNQ2O43526 872 aa24.03■■□□□ 1.44
ATG9A-217ENST00000456708 MTHFSP49914 203 aa24.03■■□□□ 1.44
ATG9A-217ENST00000456708 NHSQ6T4R5 1651 aa24.02■■□□□ 1.44
ATG9A-217ENST00000456708 RREB1Q92766 1687 aa23.99■■□□□ 1.43
ATG9A-217ENST00000456708 PKD1L3Q7Z443 1732 aa23.99■■□□□ 1.43
ATG9A-217ENST00000456708 IGSF1Q8N6C5 1336 aa23.99■■□□□ 1.43
ATG9A-217ENST00000456708 PARD3Q8TEW0 1356 aa23.99■■□□□ 1.43
ATG9A-217ENST00000456708 PLSCR1O15162 318 aa23.98■■□□□ 1.43
ATG9A-217ENST00000456708 DOT1LQ8TEK3 1739 aa23.98■■□□□ 1.43
ATG9A-217ENST00000456708 BTAF1O14981 1849 aa23.98■■□□□ 1.43
ATG9A-217ENST00000456708 IL13P35225 146 aa23.97■■□□□ 1.43
ATG9A-217ENST00000456708 RGPD3A6NKT7 1758 aaPredicted RBP23.96■■□□□ 1.43
ATG9A-217ENST00000456708 RGPD4Q7Z3J3 1758 aa23.96■■□□□ 1.43
ATG9A-217ENST00000456708 NUP188Q5SRE5 1749 aa23.96■■□□□ 1.43
ATG9A-217ENST00000456708 PCDH11XQ9BZA7 1347 aa23.96■■□□□ 1.43
ATG9A-217ENST00000456708 PCDH11YQ9BZA8 1340 aa23.96■■□□□ 1.43
ATG9A-217ENST00000456708 CYP27B1O15528 508 aa23.94■■□□□ 1.42
ATG9A-217ENST00000456708 SPG7Q9UQ90 795 aa23.94■■□□□ 1.42
ATG9A-217ENST00000456708 PRIM1P49642 420 aaKnown RBP23.93■■□□□ 1.42
ATG9A-217ENST00000456708 AEBP1Q8IUX7 1158 aa23.93■■□□□ 1.42
ATG9A-217ENST00000456708 SULT6B1Q6IMI4 303 aa23.92■■□□□ 1.42
ATG9A-217ENST00000456708 SYTL4Q96C24 671 aaPredicted RBP23.92■■□□□ 1.42
ATG9A-217ENST00000456708 PSDA5PKW4 1024 aaPredicted RBP23.91■■□□□ 1.42
ATG9A-217ENST00000456708 DIAPH1O60610 1272 aaKnown RBP23.91■■□□□ 1.42
ATG9A-217ENST00000456708 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
ATG9A-217ENST00000456708 PROM2Q8N271 834 aa23.91■■□□□ 1.42
ATG9A-217ENST00000456708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.91■■□□□ 1.42
ATG9A-217ENST00000456708 ITGB4P16144 1822 aa23.89■■□□□ 1.42
ATG9A-217ENST00000456708 TXNRD1Q16881 649 aa23.89■■□□□ 1.41
ATG9A-217ENST00000456708 PPP2R1AP30153 589 aa23.88■■□□□ 1.41
ATG9A-217ENST00000456708 R3HDM1Q15032 1099 aaKnown RBP23.88■■□□□ 1.41
ATG9A-217ENST00000456708 COL3A1P02461 1466 aaPredicted RBP23.87■■□□□ 1.41
ATG9A-217ENST00000456708 TOGARAM1Q9Y4F4 1720 aa23.87■■□□□ 1.41
ATG9A-217ENST00000456708 NBPF14Q5TI25 921 aa23.87■■□□□ 1.41
ATG9A-217ENST00000456708 IFNL2Q8IZJ0 200 aa23.87■■□□□ 1.41
ATG9A-217ENST00000456708 PHKG2P15735 406 aa23.86■■□□□ 1.41
ATG9A-217ENST00000456708 NKX1-1Q15270 411 aaPredicted RBP23.86■■□□□ 1.41
ATG9A-217ENST00000456708 PLEKHO1Q53GL0 409 aaPredicted RBP23.86■■□□□ 1.41
ATG9A-217ENST00000456708 KDRP35968 1356 aa23.86■■□□□ 1.41
ATG9A-217ENST00000456708 HMOX1P09601 288 aa23.85■■□□□ 1.41
ATG9A-217ENST00000456708 PLEKHG2Q9H7P9 1386 aa23.85■■□□□ 1.41
ATG9A-217ENST00000456708 AMOTQ4VCS5 1084 aa23.83■■□□□ 1.41
ATG9A-217ENST00000456708 CFAP53Q96M91 514 aa23.83■■□□□ 1.41
ATG9A-217ENST00000456708 U2SURPO15042 1029 aaKnown RBP23.82■■□□□ 1.4
ATG9A-217ENST00000456708 ZNF530Q6P9A1 599 aaPredicted RBP23.82■■□□□ 1.4
ATG9A-217ENST00000456708 MPRIPQ6WCQ1 1025 aa23.82■■□□□ 1.4
ATG9A-217ENST00000456708 LY75O60449 1722 aa23.81■■□□□ 1.4
ATG9A-217ENST00000456708 ANO8Q9HCE9 1232 aaPredicted RBP23.8■■□□□ 1.4
ATG9A-217ENST00000456708 LRRC4BQ9NT99 713 aa23.78■■□□□ 1.4
ATG9A-217ENST00000456708 PIGBQ92521 554 aa23.77■■□□□ 1.4
ATG9A-217ENST00000456708 HSP90AB1P08238 724 aaKnown RBP23.76■■□□□ 1.39
ATG9A-217ENST00000456708 KCNQ4P56696 695 aa23.76■■□□□ 1.39
ATG9A-217ENST00000456708 C1orf141Q5JVX7 400 aa23.76■■□□□ 1.39
ATG9A-217ENST00000456708 SLC27A3Q5K4L6 730 aa23.75■■□□□ 1.39
ATG9A-217ENST00000456708 STK32BQ9NY57 414 aa23.75■■□□□ 1.39
ATG9A-217ENST00000456708 TMOD3Q9NYL9 352 aa23.75■■□□□ 1.39
ATG9A-217ENST00000456708 VIRMAQ69YN4 1812 aaKnown RBP23.75■■□□□ 1.39
ATG9A-217ENST00000456708 PAPPAQ13219 1627 aa23.74■■□□□ 1.39
ATG9A-217ENST00000456708 DCAF5Q96JK2 942 aa23.74■■□□□ 1.39
ATG9A-217ENST00000456708 NUDCQ9Y266 331 aa23.74■■□□□ 1.39
ATG9A-217ENST00000456708 SLC15A2Q16348 729 aa23.73■■□□□ 1.39
ATG9A-217ENST00000456708 KDM6AO15550 1401 aaPredicted RBP23.73■■□□□ 1.39
ATG9A-217ENST00000456708 RALBP1Q15311 655 aa23.72■■□□□ 1.39
ATG9A-217ENST00000456708 MTHFSDQ2M296 383 aaKnown RBP23.72■■□□□ 1.39
ATG9A-217ENST00000456708 CCNL1Q9UK58 526 aaPredicted RBP23.72■■□□□ 1.39
ATG9A-217ENST00000456708 SCN11AQ9UI33 1791 aa23.72■■□□□ 1.39
ATG9A-217ENST00000456708 PALLDQ8WX93 1383 aa23.71■■□□□ 1.39
ATG9A-217ENST00000456708 ERVV-2B6SEH9 535 aa23.71■■□□□ 1.39
ATG9A-217ENST00000456708 AKAP4Q5JQC9 854 aa23.71■■□□□ 1.39
ATG9A-217ENST00000456708 SMARCC1Q92922 1105 aaPredicted RBP23.71■■□□□ 1.39
ATG9A-217ENST00000456708 U2AF1L5P0DN76 240 aaPredicted RBP23.7■■□□□ 1.38
ATG9A-217ENST00000456708 U2AF1Q01081 240 aaKnown RBP eCLIP23.7■■□□□ 1.38
ATG9A-217ENST00000456708 ZNF827Q17R98 1081 aa23.69■■□□□ 1.38
ATG9A-217ENST00000456708 ASAP1Q9ULH1 1129 aa23.69■■□□□ 1.38
ATG9A-217ENST00000456708 TAF1LQ8IZX4 1826 aa23.68■■□□□ 1.38
ATG9A-217ENST00000456708 ZNF316A6NFI3 1004 aaPredicted RBP23.68■■□□□ 1.38
ATG9A-217ENST00000456708 CABP4P57796 275 aa23.68■■□□□ 1.38
ATG9A-217ENST00000456708 RSPH6AQ9H0K4 717 aa23.68■■□□□ 1.38
ATG9A-217ENST00000456708 PRKAR2BP31323 418 aa23.67■■□□□ 1.38
ATG9A-217ENST00000456708 AKT1S1Q96B36 256 aa23.67■■□□□ 1.38
ATG9A-217ENST00000456708 PDGFDQ9GZP0 370 aaPredicted RBP23.67■■□□□ 1.38
ATG9A-217ENST00000456708 CASZ1Q86V15 1759 aa23.67■■□□□ 1.38
ATG9A-217ENST00000456708 LRP5O75197 1615 aa23.66■■□□□ 1.38
ATG9A-217ENST00000456708 LGR6Q9HBX8 967 aa23.66■■□□□ 1.38
ATG9A-217ENST00000456708 ATG3Q9NT62 314 aa23.66■■□□□ 1.38
ATG9A-217ENST00000456708 C5P01031 1676 aa23.66■■□□□ 1.38
ATG9A-217ENST00000456708 TUBGCP6Q96RT7 1819 aa23.66■■□□□ 1.38
ATG9A-217ENST00000456708 RNMTO43148 476 aaKnown RBP23.64■■□□□ 1.37
ATG9A-217ENST00000456708 NFATC2IPQ8NCF5 419 aa23.64■■□□□ 1.37
ATG9A-217ENST00000456708 PHACTR3Q96KR7 559 aa23.64■■□□□ 1.37
ATG9A-217ENST00000456708 MYBBP1AQ9BQG0 1328 aaKnown RBP23.63■■□□□ 1.37
ATG9A-217ENST00000456708 FCHSD2O94868 740 aa23.63■■□□□ 1.37
ATG9A-217ENST00000456708 GAS2L2Q8NHY3 880 aa23.63■■□□□ 1.37
ATG9A-217ENST00000456708 QSER1Q2KHR3 1735 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms