RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.87■■□□□ 1.09
PTPN6-204ENST00000456013 TECPR2O15040 1411 aa21.87■■□□□ 1.09
PTPN6-204ENST00000456013 CEP85Q6P2H3 762 aa21.87■■□□□ 1.09
PTPN6-204ENST00000456013 BAG4O95429 457 aaKnown RBP21.86■■□□□ 1.09
PTPN6-204ENST00000456013 IBTKQ9P2D0 1353 aaPredicted RBP21.86■■□□□ 1.09
PTPN6-204ENST00000456013 PTPRCP08575 1304 aa21.86■■□□□ 1.09
PTPN6-204ENST00000456013 ESPNB1AK53 854 aa21.85■■□□□ 1.09
PTPN6-204ENST00000456013 KLHL40Q2TBA0 621 aa21.85■■□□□ 1.09
PTPN6-204ENST00000456013 RTL1A6NKG5 1358 aa21.85■■□□□ 1.09
PTPN6-204ENST00000456013 EIF4A2Q14240 407 aaKnown RBP21.84■■□□□ 1.09
PTPN6-204ENST00000456013 SULT6B1Q6IMI4 303 aa21.84■■□□□ 1.09
PTPN6-204ENST00000456013 AEBP1Q8IUX7 1158 aa21.84■■□□□ 1.09
PTPN6-204ENST00000456013 MSH6P52701 1360 aa21.84■■□□□ 1.09
PTPN6-204ENST00000456013 NUCB2P80303 420 aa21.83■■□□□ 1.09
PTPN6-204ENST00000456013 KRT24Q2M2I5 525 aa21.83■■□□□ 1.09
PTPN6-204ENST00000456013 SDSP20132 328 aa21.82■■□□□ 1.08
PTPN6-204ENST00000456013 OTUD7AQ8TE49 926 aaPredicted RBP21.82■■□□□ 1.08
PTPN6-204ENST00000456013 TRIM44Q96DX7 344 aaPredicted RBP21.82■■□□□ 1.08
PTPN6-204ENST00000456013 RGPD1P0DJD0 1748 aa21.82■■□□□ 1.08
PTPN6-204ENST00000456013 CASC1Q6TDU7 716 aa21.82■■□□□ 1.08
PTPN6-204ENST00000456013 PRR36Q9H6K5 1346 aa21.82■■□□□ 1.08
PTPN6-204ENST00000456013 CYP2E1P05181 493 aaPredicted RBP21.81■■□□□ 1.08
PTPN6-204ENST00000456013 DDX49Q9Y6V7 483 aaKnown RBP21.81■■□□□ 1.08
PTPN6-204ENST00000456013 ERBB4Q15303 1308 aa21.81■■□□□ 1.08
PTPN6-204ENST00000456013 NAP1L5Q96NT1 182 aaPredicted RBP21.8■■□□□ 1.08
PTPN6-204ENST00000456013 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
PTPN6-204ENST00000456013 MCM10Q7L590 875 aa21.8■■□□□ 1.08
PTPN6-204ENST00000456013 CWC22Q9HCG8 908 aaKnown RBP21.8■■□□□ 1.08
PTPN6-204ENST00000456013 MEIS3Q99687 375 aa21.79■■□□□ 1.08
PTPN6-204ENST00000456013 SMARCA5O60264 1052 aaPredicted RBP21.79■■□□□ 1.08
PTPN6-204ENST00000456013 PEAK1Q9H792 1746 aa21.78■■□□□ 1.08
PTPN6-204ENST00000456013 OVOS2A0A0J9YW53 1432 aa21.78■■□□□ 1.08
PTPN6-204ENST00000456013 OVOS2Q6IE36 1432 aa21.78■■□□□ 1.08
PTPN6-204ENST00000456013 TSPOAP1O95153 1857 aa21.78■■□□□ 1.08
PTPN6-204ENST00000456013 CCDC173Q0VFZ6 552 aa21.78■■□□□ 1.08
PTPN6-204ENST00000456013 TTC21BQ7Z4L5 1316 aa21.78■■□□□ 1.08
PTPN6-204ENST00000456013 CRB1P82279 1406 aa21.78■■□□□ 1.08
PTPN6-204ENST00000456013 TOPAZ1Q8N9V7 1692 aa21.78■■□□□ 1.08
PTPN6-204ENST00000456013 ST18O60284 1047 aa21.77■■□□□ 1.08
PTPN6-204ENST00000456013 DIP2BQ9P265 1576 aa21.77■■□□□ 1.08
PTPN6-204ENST00000456013 REC8O95072 547 aa21.77■■□□□ 1.08
PTPN6-204ENST00000456013 PPP1R9BQ96SB3 815 aa21.77■■□□□ 1.08
PTPN6-204ENST00000456013 HMMRO75330 724 aa21.76■■□□□ 1.07
PTPN6-204ENST00000456013 HDGFP51858 240 aaKnown RBP21.76■■□□□ 1.07
PTPN6-204ENST00000456013 FAM69CQ0P6D2 419 aa21.76■■□□□ 1.07
PTPN6-204ENST00000456013 MCTP1Q6DN14 999 aa21.76■■□□□ 1.07
PTPN6-204ENST00000456013 NASPP49321 788 aaPredicted RBP21.75■■□□□ 1.07
PTPN6-204ENST00000456013 ZNF445P59923 1031 aa21.75■■□□□ 1.07
PTPN6-204ENST00000456013 OSBPL3Q9H4L5 887 aa21.75■■□□□ 1.07
PTPN6-204ENST00000456013 SLC4A2P04920 1241 aa21.75■■□□□ 1.07
PTPN6-204ENST00000456013 UBE2Q2Q8WVN8 375 aa21.75■■□□□ 1.07
PTPN6-204ENST00000456013 APBB1O00213 710 aa21.74■■□□□ 1.07
PTPN6-204ENST00000456013 LMBRD1Q9NUN5 540 aa21.74■■□□□ 1.07
PTPN6-204ENST00000456013 ERC2O15083 957 aa21.74■■□□□ 1.07
PTPN6-204ENST00000456013 MLECQ14165 292 aa21.73■■□□□ 1.07
PTPN6-204ENST00000456013 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.72■■□□□ 1.07
PTPN6-204ENST00000456013 ACEP12821 1306 aa21.72■■□□□ 1.07
PTPN6-204ENST00000456013 HSP90AB2PQ58FF8 381 aa21.72■■□□□ 1.07
PTPN6-204ENST00000456013 TUBGCP6Q96RT7 1819 aa21.72■■□□□ 1.07
PTPN6-204ENST00000456013 USP31Q70CQ4 1352 aa21.72■■□□□ 1.07
PTPN6-204ENST00000456013 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
PTPN6-204ENST00000456013 PLEKHG3A1L390 1219 aa21.72■■□□□ 1.07
PTPN6-204ENST00000456013 PKP1Q13835 747 aa21.72■■□□□ 1.07
PTPN6-204ENST00000456013 ROBO2Q9HCK4 1378 aa21.71■■□□□ 1.07
PTPN6-204ENST00000456013 CCT4P50991 539 aaKnown RBP21.71■■□□□ 1.07
PTPN6-204ENST00000456013 ANP32BQ92688 251 aaKnown RBP21.71■■□□□ 1.07
PTPN6-204ENST00000456013 USP6P35125 1406 aa21.71■■□□□ 1.07
PTPN6-204ENST00000456013 PDE1AP54750 535 aa21.7■■□□□ 1.07
PTPN6-204ENST00000456013 ARHGEF10O15013 1369 aa21.7■■□□□ 1.07
PTPN6-204ENST00000456013 ZGPATQ8N5A5 531 aaKnown RBP21.7■■□□□ 1.06
PTPN6-204ENST00000456013 ZSCAN23Q3MJ62 389 aa21.69■■□□□ 1.06
PTPN6-204ENST00000456013 CAVIN1Q6NZI2 390 aaKnown RBP21.68■■□□□ 1.06
PTPN6-204ENST00000456013 G2E3Q7L622 706 aa21.68■■□□□ 1.06
PTPN6-204ENST00000456013 ZDHHC9Q9Y397 364 aa21.68■■□□□ 1.06
PTPN6-204ENST00000456013 CYB5RLQ6IPT4 315 aa21.67■■□□□ 1.06
PTPN6-204ENST00000456013 MIS18AQ9NYP9 233 aa21.67■■□□□ 1.06
PTPN6-204ENST00000456013 TSPYL4Q9UJ04 414 aa21.67■■□□□ 1.06
PTPN6-204ENST00000456013 RIMS1Q86UR5 1692 aaKnown RBP21.67■■□□□ 1.06
PTPN6-204ENST00000456013 UBR1Q8IWV7 1749 aa21.67■■□□□ 1.06
PTPN6-204ENST00000456013 NCLP19338 710 aaKnown RBP21.67■■□□□ 1.06
PTPN6-204ENST00000456013 SLC4A10Q6U841 1118 aa21.67■■□□□ 1.06
PTPN6-204ENST00000456013 RTF1Q92541 710 aaKnown RBP21.66■■□□□ 1.06
PTPN6-204ENST00000456013 MAP3K19Q56UN5 1328 aa21.66■■□□□ 1.06
PTPN6-204ENST00000456013 SALL3Q9BXA9 1300 aa21.66■■□□□ 1.06
PTPN6-204ENST00000456013 F6X3S4 739 aa21.66■■□□□ 1.06
PTPN6-204ENST00000456013 GNAI2P04899 355 aa21.66■■□□□ 1.06
PTPN6-204ENST00000456013 MTHFSDQ2M296 383 aaKnown RBP21.66■■□□□ 1.06
PTPN6-204ENST00000456013 TMEM2Q9UHN6 1383 aa21.65■■□□□ 1.06
PTPN6-204ENST00000456013 SSH2Q76I76 1423 aa21.65■■□□□ 1.06
PTPN6-204ENST00000456013 ADAMTS13Q76LX8 1427 aa21.65■■□□□ 1.06
PTPN6-204ENST00000456013 ZSCAN30Q86W11 494 aa21.65■■□□□ 1.06
PTPN6-204ENST00000456013 FOXO3O43524 673 aa21.64■■□□□ 1.05
PTPN6-204ENST00000456013 PRPF40AO75400 957 aaKnown RBP21.64■■□□□ 1.05
PTPN6-204ENST00000456013 CACNA1FO60840 1977 aa21.64■■□□□ 1.05
PTPN6-204ENST00000456013 MCM2P49736 904 aa21.63■■□□□ 1.05
PTPN6-204ENST00000456013 ESF1Q9H501 851 aaKnown RBP21.63■■□□□ 1.05
PTPN6-204ENST00000456013 KDRP35968 1356 aa21.63■■□□□ 1.05
PTPN6-204ENST00000456013 XRN1Q8IZH2 1706 aaKnown RBP21.63■■□□□ 1.05
PTPN6-204ENST00000456013 GPT2Q8TD30 523 aa21.63■■□□□ 1.05
PTPN6-204ENST00000456013 TNRQ92752 1358 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms