RNA–Protein interactions for RNA: ENST00000455540.2

CYCSP53-201, Transcript of cytochrome c, somatic pseudogene 53, humanhuman

BASIC

Gene CYCSP53, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP53-201ENST00000455540 USP17L4A6NCW7 530 aa11.23□□□□□ -0.61
CYCSP53-201ENST00000455540 NCOA4Q13772 614 aa11.23□□□□□ -0.61
CYCSP53-201ENST00000455540 USP17L2Q6R6M4 530 aa11.23□□□□□ -0.61
CYCSP53-201ENST00000455540 USP17L1Q7RTZ2 530 aa11.23□□□□□ -0.61
CYCSP53-201ENST00000455540 MAFBQ9Y5Q3 323 aaPredicted RBP11.23□□□□□ -0.61
CYCSP53-201ENST00000455540 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
CYCSP53-201ENST00000455540 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
CYCSP53-201ENST00000455540 ATP1A2P50993 1020 aa11.22□□□□□ -0.61
CYCSP53-201ENST00000455540 CBLBQ13191 982 aa11.22□□□□□ -0.61
CYCSP53-201ENST00000455540 MRPL14Q6P1L8 145 aaKnown RBP11.22□□□□□ -0.61
CYCSP53-201ENST00000455540 GNRH1P01148 92 aa11.21□□□□□ -0.61
CYCSP53-201ENST00000455540 LMOD1P29536 600 aaPredicted RBP11.21□□□□□ -0.61
CYCSP53-201ENST00000455540 SCTRP47872 440 aa11.21□□□□□ -0.61
CYCSP53-201ENST00000455540 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
CYCSP53-201ENST00000455540 LINC00528Q8N1L1 170 aa11.2□□□□□ -0.62
CYCSP53-201ENST00000455540 OSBPL3Q9H4L5 887 aa11.2□□□□□ -0.62
CYCSP53-201ENST00000455540 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
CYCSP53-201ENST00000455540 PTGIRP43119 386 aa11.19□□□□□ -0.62
CYCSP53-201ENST00000455540 VRTNQ9H8Y1 702 aa11.19□□□□□ -0.62
CYCSP53-201ENST00000455540 ATP13A2Q9NQ11 1180 aa11.19□□□□□ -0.62
CYCSP53-201ENST00000455540 MKRN1Q9UHC7 482 aaKnown RBP11.19□□□□□ -0.62
CYCSP53-201ENST00000455540 ST8SIA5O15466 376 aa11.18□□□□□ -0.62
CYCSP53-201ENST00000455540 ESCO1Q5FWF5 840 aa11.18□□□□□ -0.62
CYCSP53-201ENST00000455540 CFAP70Q5T0N1 1121 aa11.18□□□□□ -0.62
CYCSP53-201ENST00000455540 DEPDC4Q8N2C3 294 aa11.18□□□□□ -0.62
CYCSP53-201ENST00000455540 KIFC2Q96AC6 838 aa11.18□□□□□ -0.62
CYCSP53-201ENST00000455540 BMP2P12643 396 aa11.17□□□□□ -0.62
CYCSP53-201ENST00000455540 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
CYCSP53-201ENST00000455540 SPINT1O43278 529 aa11.16□□□□□ -0.62
CYCSP53-201ENST00000455540 C1orf115Q9H7X2 142 aa11.16□□□□□ -0.62
CYCSP53-201ENST00000455540 GTF2IP78347 998 aa11.15□□□□□ -0.62
CYCSP53-201ENST00000455540 RELBQ01201 579 aa11.15□□□□□ -0.62
CYCSP53-201ENST00000455540 LARGE2Q8N3Y3 721 aa11.15□□□□□ -0.62
CYCSP53-201ENST00000455540 RBM19Q9Y4C8 960 aaKnown RBP11.15□□□□□ -0.62
CYCSP53-201ENST00000455540 PCDHGA11Q9Y5H2 935 aa11.15□□□□□ -0.62
CYCSP53-201ENST00000455540 GPC1P35052 558 aa11.14□□□□□ -0.63
CYCSP53-201ENST00000455540 LARP1Q6PKG0 1096 aaKnown RBP11.14□□□□□ -0.63
CYCSP53-201ENST00000455540 TRIM46Q7Z4K8 759 aa11.14□□□□□ -0.63
CYCSP53-201ENST00000455540 AGBL1Q96MI9 1066 aa11.14□□□□□ -0.63
CYCSP53-201ENST00000455540 NLRP3Q96P20 1036 aa11.14□□□□□ -0.63
CYCSP53-201ENST00000455540 A0A1W2PRU2 124 aa11.13□□□□□ -0.63
CYCSP53-201ENST00000455540 WASLO00401 505 aaPredicted RBP11.13□□□□□ -0.63
CYCSP53-201ENST00000455540 PPP1R15AO75807 674 aaPredicted RBP11.13□□□□□ -0.63
CYCSP53-201ENST00000455540 RASA1P20936 1047 aa11.13□□□□□ -0.63
CYCSP53-201ENST00000455540 CLN3Q13286 438 aa11.13□□□□□ -0.63
CYCSP53-201ENST00000455540 KANK4Q5T7N3 995 aaPredicted RBP11.13□□□□□ -0.63
CYCSP53-201ENST00000455540 KDF1Q8NAX2 398 aaPredicted RBP11.13□□□□□ -0.63
CYCSP53-201ENST00000455540 ZFP42Q96MM3 310 aa11.13□□□□□ -0.63
CYCSP53-201ENST00000455540 DNAAF2Q9NVR5 837 aaKnown RBP11.13□□□□□ -0.63
CYCSP53-201ENST00000455540 BMP1P13497 986 aa11.12□□□□□ -0.63
CYCSP53-201ENST00000455540 PSME1Q06323 249 aa11.12□□□□□ -0.63
CYCSP53-201ENST00000455540 C6orf118Q5T5N4 469 aa11.12□□□□□ -0.63
CYCSP53-201ENST00000455540 OGFOD1Q8N543 542 aa11.12□□□□□ -0.63
CYCSP53-201ENST00000455540 PURBQ96QR8 312 aaKnown RBP11.12□□□□□ -0.63
CYCSP53-201ENST00000455540 FAM196BA6NMK8 535 aa11.11□□□□□ -0.63
CYCSP53-201ENST00000455540 BACH1O14867 736 aa11.11□□□□□ -0.63
CYCSP53-201ENST00000455540 RFX1P22670 979 aa11.11□□□□□ -0.63
CYCSP53-201ENST00000455540 PBXIP1Q96AQ6 731 aa11.11□□□□□ -0.63
CYCSP53-201ENST00000455540 XAGE2Q96GT9 111 aa11.11□□□□□ -0.63
CYCSP53-201ENST00000455540 ESYT1Q9BSJ8 1104 aa11.11□□□□□ -0.63
CYCSP53-201ENST00000455540 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
CYCSP53-201ENST00000455540 DACH1Q9UI36 760 aa11.11□□□□□ -0.63
CYCSP53-201ENST00000455540 TRIM47Q96LD4 638 aa11.1□□□□□ -0.63
CYCSP53-201ENST00000455540 ARHGEF10LQ9HCE6 1279 aa11.1□□□□□ -0.63
CYCSP53-201ENST00000455540 MEN1O00255 615 aa11.09□□□□□ -0.63
CYCSP53-201ENST00000455540 INHAP05111 366 aa11.09□□□□□ -0.63
CYCSP53-201ENST00000455540 RNF144AP50876 292 aaPredicted RBP11.09□□□□□ -0.63
CYCSP53-201ENST00000455540 GDF10P55107 478 aa11.09□□□□□ -0.63
CYCSP53-201ENST00000455540 CCDC102BQ68D86 513 aa11.09□□□□□ -0.63
CYCSP53-201ENST00000455540 CNKSR1Q969H4 720 aa11.09□□□□□ -0.63
CYCSP53-201ENST00000455540 ACIN1Q9UKV3 1341 aaKnown RBP11.09□□□□□ -0.63
CYCSP53-201ENST00000455540 TTLL8A6PVC2 850 aa11.08□□□□□ -0.64
CYCSP53-201ENST00000455540 LCE2BO14633 110 aa11.08□□□□□ -0.64
CYCSP53-201ENST00000455540 ZBTB7BO15156 539 aaPredicted RBP11.08□□□□□ -0.64
CYCSP53-201ENST00000455540 SIX5Q8N196 739 aa11.08□□□□□ -0.64
CYCSP53-201ENST00000455540 INSM2Q96T92 566 aaPredicted RBP11.08□□□□□ -0.64
CYCSP53-201ENST00000455540 POLMQ9NP87 494 aaPredicted RBP11.08□□□□□ -0.64
CYCSP53-201ENST00000455540 SOS2Q07890 1332 aaPredicted RBP11.08□□□□□ -0.64
CYCSP53-201ENST00000455540 GTF2E1P29083 439 aaPredicted RBP11.07□□□□□ -0.64
CYCSP53-201ENST00000455540 CLDN10P78369 228 aa11.07□□□□□ -0.64
CYCSP53-201ENST00000455540 C11orf95C9JLR9 678 aaPredicted RBP11.06□□□□□ -0.64
CYCSP53-201ENST00000455540 M0R2N6 131 aa11.06□□□□□ -0.64
CYCSP53-201ENST00000455540 SCNN1DP51172 638 aa11.06□□□□□ -0.64
CYCSP53-201ENST00000455540 SRPK2P78362 688 aaKnown RBP11.06□□□□□ -0.64
CYCSP53-201ENST00000455540 PTK7Q13308 1070 aa11.06□□□□□ -0.64
CYCSP53-201ENST00000455540 TPCN2Q8NHX9 752 aa11.06□□□□□ -0.64
CYCSP53-201ENST00000455540 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
CYCSP53-201ENST00000455540 ETNK1Q9HBU6 452 aa11.06□□□□□ -0.64
CYCSP53-201ENST00000455540 GMPR2Q9P2T1 348 aaKnown RBP11.06□□□□□ -0.64
CYCSP53-201ENST00000455540 MAN1A2O60476 641 aa11.05□□□□□ -0.64
CYCSP53-201ENST00000455540 ATG7O95352 703 aa11.05□□□□□ -0.64
CYCSP53-201ENST00000455540 ELOAQ14241 798 aaKnown RBP11.05□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L15C9J2P7 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L10C9JJH3 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L13C9JLJ4 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L12C9JPN9 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L11C9JVI0 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L21D6R901 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L18D6R9N7 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L22D6RA61 530 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms