RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 MYOM2P54296 1465 aa11.73□□□□□ -0.53
LINC01940-201ENST00000455228 TET3O43151 1660 aa11.73□□□□□ -0.53
LINC01940-201ENST00000455228 MSNP26038 577 aaKnown RBP11.73□□□□□ -0.53
LINC01940-201ENST00000455228 SGSM3Q96HU1 749 aa11.73□□□□□ -0.53
LINC01940-201ENST00000455228 NOS1P29475 1434 aa11.73□□□□□ -0.53
LINC01940-201ENST00000455228 YEATS2Q9ULM3 1422 aa11.73□□□□□ -0.53
LINC01940-201ENST00000455228 ABCA6Q8N139 1617 aa11.73□□□□□ -0.53
LINC01940-201ENST00000455228 KLHL33A6NCF5 533 aa11.72□□□□□ -0.53
LINC01940-201ENST00000455228 SAFB2Q14151 953 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC01940-201ENST00000455228 TMEM57Q8N5G2 664 aa11.72□□□□□ -0.53
LINC01940-201ENST00000455228 IQSEC2Q5JU85 1478 aa11.72□□□□□ -0.53
LINC01940-201ENST00000455228 ICE2Q659A1 982 aa11.72□□□□□ -0.53
LINC01940-201ENST00000455228 ANKRD23Q86SG2 305 aa11.72□□□□□ -0.53
LINC01940-201ENST00000455228 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
LINC01940-201ENST00000455228 ZNF518AQ6AHZ1 1483 aa11.72□□□□□ -0.53
LINC01940-201ENST00000455228 EVC2Q86UK5 1308 aa11.72□□□□□ -0.53
LINC01940-201ENST00000455228 KIF3CO14782 793 aa11.72□□□□□ -0.53
LINC01940-201ENST00000455228 SMC5Q8IY18 1101 aa11.72□□□□□ -0.53
LINC01940-201ENST00000455228 ZFYVE16Q7Z3T8 1539 aa11.71□□□□□ -0.53
LINC01940-201ENST00000455228 ANKRD33BA6NCL7 494 aa11.71□□□□□ -0.53
LINC01940-201ENST00000455228 TMPOP42166 694 aaKnown RBP11.71□□□□□ -0.53
LINC01940-201ENST00000455228 TERF2Q15554 542 aa11.71□□□□□ -0.53
LINC01940-201ENST00000455228 CTIFO43310 598 aaKnown RBP11.71□□□□□ -0.54
LINC01940-201ENST00000455228 RPAINQ86UA6 219 aa11.71□□□□□ -0.54
LINC01940-201ENST00000455228 GAS2L3Q86XJ1 694 aa11.71□□□□□ -0.54
LINC01940-201ENST00000455228 TNPO1Q92973 898 aaKnown RBP11.71□□□□□ -0.54
LINC01940-201ENST00000455228 MORC2Q9Y6X9 1032 aaPredicted RBP11.71□□□□□ -0.54
LINC01940-201ENST00000455228 DHX16O60231 1041 aaKnown RBP11.7□□□□□ -0.54
LINC01940-201ENST00000455228 AEBP1Q8IUX7 1158 aa11.7□□□□□ -0.54
LINC01940-201ENST00000455228 MTA1Q13330 715 aa11.7□□□□□ -0.54
LINC01940-201ENST00000455228 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
LINC01940-201ENST00000455228 MNS1Q8NEH6 495 aa11.7□□□□□ -0.54
LINC01940-201ENST00000455228 C14orf93Q9H972 538 aaKnown RBP11.7□□□□□ -0.54
LINC01940-201ENST00000455228 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
LINC01940-201ENST00000455228 GOLGA6L22H0YM25 854 aa11.7□□□□□ -0.54
LINC01940-201ENST00000455228 SKOR2Q2VWA4 1001 aaPredicted RBP11.7□□□□□ -0.54
LINC01940-201ENST00000455228 SLC26A8Q96RN1 970 aa11.7□□□□□ -0.54
LINC01940-201ENST00000455228 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
LINC01940-201ENST00000455228 CABP2Q9NPB3 220 aa11.7□□□□□ -0.54
LINC01940-201ENST00000455228 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
LINC01940-201ENST00000455228 FAM210AQ96ND0 272 aa11.69□□□□□ -0.54
LINC01940-201ENST00000455228 CLEC17AQ6ZS10 378 aa11.69□□□□□ -0.54
LINC01940-201ENST00000455228 CHD1LQ86WJ1 897 aa11.69□□□□□ -0.54
LINC01940-201ENST00000455228 GGNBP2Q9H3C7 697 aa11.69□□□□□ -0.54
LINC01940-201ENST00000455228 ZBTB40Q9NUA8 1239 aa11.69□□□□□ -0.54
LINC01940-201ENST00000455228 KIF1BO60333 1816 aa11.69□□□□□ -0.54
LINC01940-201ENST00000455228 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
LINC01940-201ENST00000455228 SETDB1Q15047 1291 aa11.69□□□□□ -0.54
LINC01940-201ENST00000455228 CCDC96Q2M329 555 aa11.69□□□□□ -0.54
LINC01940-201ENST00000455228 SNX21Q969T3 373 aa11.69□□□□□ -0.54
LINC01940-201ENST00000455228 CIZ1Q9ULV3 898 aaPredicted RBP11.69□□□□□ -0.54
LINC01940-201ENST00000455228 ERCC6L2Q5T890 1561 aa11.68□□□□□ -0.54
LINC01940-201ENST00000455228 GOLIM4O00461 696 aa11.68□□□□□ -0.54
LINC01940-201ENST00000455228 NUCB1Q02818 461 aa11.68□□□□□ -0.54
LINC01940-201ENST00000455228 TRDNQ13061 729 aa11.68□□□□□ -0.54
LINC01940-201ENST00000455228 MUM1L1Q5H9M0 696 aa11.68□□□□□ -0.54
LINC01940-201ENST00000455228 GGT6Q6P531 493 aa11.68□□□□□ -0.54
LINC01940-201ENST00000455228 CASC1Q6TDU7 716 aa11.68□□□□□ -0.54
LINC01940-201ENST00000455228 ATP7AQ04656 1500 aa11.68□□□□□ -0.54
LINC01940-201ENST00000455228 OS9Q13438 667 aaPredicted RBP11.68□□□□□ -0.54
LINC01940-201ENST00000455228 EP400NLQ6ZTU2 488 aa11.68□□□□□ -0.54
LINC01940-201ENST00000455228 ZNF692Q9BU19 519 aaPredicted RBP11.68□□□□□ -0.54
LINC01940-201ENST00000455228 TSGA10IPQ3SY00 556 aa11.67□□□□□ -0.54
LINC01940-201ENST00000455228 NSD2O96028 1365 aa11.67□□□□□ -0.54
LINC01940-201ENST00000455228 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
LINC01940-201ENST00000455228 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
LINC01940-201ENST00000455228 FANCAO15360 1455 aa11.67□□□□□ -0.54
LINC01940-201ENST00000455228 DEPDC5O75140 1603 aa11.66□□□□□ -0.54
LINC01940-201ENST00000455228 ZCCHC11Q5TAX3 1644 aaKnown RBP11.66□□□□□ -0.54
LINC01940-201ENST00000455228 PPP1R12AO14974 1030 aaPredicted RBP11.66□□□□□ -0.54
LINC01940-201ENST00000455228 ZC3H12AQ5D1E8 599 aaKnown RBP11.66□□□□□ -0.54
LINC01940-201ENST00000455228 BMP2KLQ5H9B9 411 aa11.66□□□□□ -0.54
LINC01940-201ENST00000455228 TSHZ1Q6ZSZ6 1077 aa11.66□□□□□ -0.54
LINC01940-201ENST00000455228 PDCL2Q8N4E4 241 aa11.66□□□□□ -0.54
LINC01940-201ENST00000455228 JMYQ8N9B5 988 aa11.66□□□□□ -0.54
LINC01940-201ENST00000455228 STK26Q9P289 416 aa11.66□□□□□ -0.54
LINC01940-201ENST00000455228 ABCC11Q96J66 1382 aa11.66□□□□□ -0.54
LINC01940-201ENST00000455228 CHD1O14646 1710 aa11.66□□□□□ -0.54
LINC01940-201ENST00000455228 SSR1P43307 286 aaKnown RBP11.65□□□□□ -0.54
LINC01940-201ENST00000455228 RAB3GAP1Q15042 981 aa11.65□□□□□ -0.54
LINC01940-201ENST00000455228 ZNF771Q7L3S4 317 aaPredicted RBP11.65□□□□□ -0.54
LINC01940-201ENST00000455228 DDX41Q9UJV9 622 aaKnown RBP11.65□□□□□ -0.54
LINC01940-201ENST00000455228 MLECQ14165 292 aa11.65□□□□□ -0.54
LINC01940-201ENST00000455228 NEURL4Q96JN8 1562 aa11.65□□□□□ -0.55
LINC01940-201ENST00000455228 K7ELQ4 463 aaPredicted RBP11.65□□□□□ -0.55
LINC01940-201ENST00000455228 DIAPH1O60610 1272 aaKnown RBP11.65□□□□□ -0.55
LINC01940-201ENST00000455228 COQ9O75208 318 aa11.65□□□□□ -0.55
LINC01940-201ENST00000455228 ZNF853P0CG23 659 aa11.65□□□□□ -0.55
LINC01940-201ENST00000455228 ATG3Q9NT62 314 aa11.65□□□□□ -0.55
LINC01940-201ENST00000455228 IL16Q14005 1332 aa11.64□□□□□ -0.55
LINC01940-201ENST00000455228 ADGRL1O94910 1474 aa11.64□□□□□ -0.55
LINC01940-201ENST00000455228 GTF2A1P52655 376 aaPredicted RBP11.64□□□□□ -0.55
LINC01940-201ENST00000455228 PLEKHF1Q96S99 279 aa11.64□□□□□ -0.55
LINC01940-201ENST00000455228 C1orf115Q9H7X2 142 aa11.64□□□□□ -0.55
LINC01940-201ENST00000455228 DDX49Q9Y6V7 483 aaKnown RBP11.64□□□□□ -0.55
LINC01940-201ENST00000455228 ZNF445P59923 1031 aa11.64□□□□□ -0.55
LINC01940-201ENST00000455228 GCC1Q96CN9 775 aa11.63□□□□□ -0.55
LINC01940-201ENST00000455228 SPTLC3Q9NUV7 552 aa11.63□□□□□ -0.55
LINC01940-201ENST00000455228 MYO3AQ8NEV4 1616 aa11.63□□□□□ -0.55
LINC01940-201ENST00000455228 QRICH2Q9H0J4 1663 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms