RNA–Protein interactions for RNA: ENST00000455009.5

ARPC1B-212, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-212ENST00000455009 PCDH11XQ9BZA7 1347 aa27.24■■□□□ 1.95
ARPC1B-212ENST00000455009 PCDH11YQ9BZA8 1340 aa27.24■■□□□ 1.95
ARPC1B-212ENST00000455009 MTHFSP49914 203 aa27.24■■□□□ 1.95
ARPC1B-212ENST00000455009 IGSF1Q8N6C5 1336 aa27.23■■□□□ 1.95
ARPC1B-212ENST00000455009 EN1Q05925 392 aaPredicted RBP27.23■■□□□ 1.95
ARPC1B-212ENST00000455009 CNGB1Q14028 1251 aaPredicted RBP27.23■■□□□ 1.95
ARPC1B-212ENST00000455009 NHSQ6T4R5 1651 aa27.21■■□□□ 1.95
ARPC1B-212ENST00000455009 SPG7Q9UQ90 795 aa27.21■■□□□ 1.95
ARPC1B-212ENST00000455009 RGPD3A6NKT7 1758 aaPredicted RBP27.2■■□□□ 1.95
ARPC1B-212ENST00000455009 RGPD4Q7Z3J3 1758 aa27.2■■□□□ 1.95
ARPC1B-212ENST00000455009 SHANK3Q9BYB0 1731 aa27.2■■□□□ 1.94
ARPC1B-212ENST00000455009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.2■■□□□ 1.94
ARPC1B-212ENST00000455009 PKD1L3Q7Z443 1732 aa27.19■■□□□ 1.94
ARPC1B-212ENST00000455009 PLSCR1O15162 318 aa27.18■■□□□ 1.94
ARPC1B-212ENST00000455009 CAMKK2Q96RR4 588 aa27.18■■□□□ 1.94
ARPC1B-212ENST00000455009 DIAPH1O60610 1272 aaKnown RBP27.16■■□□□ 1.94
ARPC1B-212ENST00000455009 IL13P35225 146 aa27.16■■□□□ 1.94
ARPC1B-212ENST00000455009 EZH2Q15910 746 aaKnown RBP27.16■■□□□ 1.94
ARPC1B-212ENST00000455009 CFAP53Q96M91 514 aa27.16■■□□□ 1.94
ARPC1B-212ENST00000455009 ACSBG1Q96GR2 724 aa27.15■■□□□ 1.94
ARPC1B-212ENST00000455009 RREB1Q92766 1687 aa27.12■■□□□ 1.93
ARPC1B-212ENST00000455009 DOT1LQ8TEK3 1739 aa27.12■■□□□ 1.93
ARPC1B-212ENST00000455009 KDRP35968 1356 aa27.11■■□□□ 1.93
ARPC1B-212ENST00000455009 KCNQ2O43526 872 aa27.11■■□□□ 1.93
ARPC1B-212ENST00000455009 AMOTQ4VCS5 1084 aa27.11■■□□□ 1.93
ARPC1B-212ENST00000455009 SULT6B1Q6IMI4 303 aa27.11■■□□□ 1.93
ARPC1B-212ENST00000455009 DDX10Q13206 875 aaKnown RBP27.1■■□□□ 1.93
ARPC1B-212ENST00000455009 PLEKHO1Q53GL0 409 aaPredicted RBP27.1■■□□□ 1.93
ARPC1B-212ENST00000455009 PPP2R1AP30153 589 aa27.09■■□□□ 1.93
ARPC1B-212ENST00000455009 IFNL2Q8IZJ0 200 aa27.09■■□□□ 1.93
ARPC1B-212ENST00000455009 SYTL4Q96C24 671 aaPredicted RBP27.09■■□□□ 1.93
ARPC1B-212ENST00000455009 CYP27B1O15528 508 aa27.08■■□□□ 1.93
ARPC1B-212ENST00000455009 NBPF14Q5TI25 921 aa27.08■■□□□ 1.93
ARPC1B-212ENST00000455009 PTF1AQ7RTS3 328 aa27.08■■□□□ 1.93
ARPC1B-212ENST00000455009 BTAF1O14981 1849 aa27.08■■□□□ 1.93
ARPC1B-212ENST00000455009 COL3A1P02461 1466 aaPredicted RBP27.07■■□□□ 1.92
ARPC1B-212ENST00000455009 PRIM1P49642 420 aaKnown RBP27.06■■□□□ 1.92
ARPC1B-212ENST00000455009 NUP188Q5SRE5 1749 aa27.06■■□□□ 1.92
ARPC1B-212ENST00000455009 KAT6BQ8WYB5 2073 aa27.05■■□□□ 1.92
ARPC1B-212ENST00000455009 HSP90AB1P08238 724 aaKnown RBP27.05■■□□□ 1.92
ARPC1B-212ENST00000455009 NKX1-1Q15270 411 aaPredicted RBP27.05■■□□□ 1.92
ARPC1B-212ENST00000455009 AEBP1Q8IUX7 1158 aa27.05■■□□□ 1.92
ARPC1B-212ENST00000455009 NUDCQ9Y266 331 aa27.05■■□□□ 1.92
ARPC1B-212ENST00000455009 PHKG2P15735 406 aa27.04■■□□□ 1.92
ARPC1B-212ENST00000455009 RALBP1Q15311 655 aa27.04■■□□□ 1.92
ARPC1B-212ENST00000455009 U2SURPO15042 1029 aaKnown RBP27.02■■□□□ 1.92
ARPC1B-212ENST00000455009 C1orf141Q5JVX7 400 aa27.02■■□□□ 1.92
ARPC1B-212ENST00000455009 TXNRD1Q16881 649 aa27.01■■□□□ 1.91
ARPC1B-212ENST00000455009 ZNF530Q6P9A1 599 aaPredicted RBP27■■□□□ 1.91
ARPC1B-212ENST00000455009 HMOX1P09601 288 aa26.99■■□□□ 1.91
ARPC1B-212ENST00000455009 HMGB2P26583 209 aaKnown RBP26.99■■□□□ 1.91
ARPC1B-212ENST00000455009 SLC27A3Q5K4L6 730 aa26.98■■□□□ 1.91
ARPC1B-212ENST00000455009 DCAF5Q96JK2 942 aa26.97■■□□□ 1.91
ARPC1B-212ENST00000455009 TOGARAM1Q9Y4F4 1720 aa26.96■■□□□ 1.91
ARPC1B-212ENST00000455009 MPRIPQ6WCQ1 1025 aa26.96■■□□□ 1.91
ARPC1B-212ENST00000455009 ZNF316A6NFI3 1004 aaPredicted RBP26.95■■□□□ 1.9
ARPC1B-212ENST00000455009 PROM2Q8N271 834 aa26.95■■□□□ 1.9
ARPC1B-212ENST00000455009 TMOD3Q9NYL9 352 aa26.95■■□□□ 1.9
ARPC1B-212ENST00000455009 R3HDM1Q15032 1099 aaKnown RBP26.94■■□□□ 1.9
ARPC1B-212ENST00000455009 SMARCC1Q92922 1105 aaPredicted RBP26.94■■□□□ 1.9
ARPC1B-212ENST00000455009 ITGB4P16144 1822 aa26.94■■□□□ 1.9
ARPC1B-212ENST00000455009 PSDA5PKW4 1024 aaPredicted RBP26.93■■□□□ 1.9
ARPC1B-212ENST00000455009 ERVV-2B6SEH9 535 aa26.93■■□□□ 1.9
ARPC1B-212ENST00000455009 AKAP4Q5JQC9 854 aa26.93■■□□□ 1.9
ARPC1B-212ENST00000455009 STK32BQ9NY57 414 aa26.92■■□□□ 1.9
ARPC1B-212ENST00000455009 LY75O60449 1722 aa26.91■■□□□ 1.9
ARPC1B-212ENST00000455009 U2AF1L5P0DN76 240 aaPredicted RBP26.91■■□□□ 1.9
ARPC1B-212ENST00000455009 U2AF1Q01081 240 aaKnown RBP eCLIP26.91■■□□□ 1.9
ARPC1B-212ENST00000455009 MYBBP1AQ9BQG0 1328 aaKnown RBP26.9■■□□□ 1.9
ARPC1B-212ENST00000455009 PALLDQ8WX93 1383 aa26.89■■□□□ 1.9
ARPC1B-212ENST00000455009 GAS2L2Q8NHY3 880 aa26.89■■□□□ 1.9
ARPC1B-212ENST00000455009 PIGBQ92521 554 aa26.89■■□□□ 1.9
ARPC1B-212ENST00000455009 CCNL1Q9UK58 526 aaPredicted RBP26.88■■□□□ 1.89
ARPC1B-212ENST00000455009 FCHSD2O94868 740 aa26.87■■□□□ 1.89
ARPC1B-212ENST00000455009 KDM6AO15550 1401 aaPredicted RBP26.87■■□□□ 1.89
ARPC1B-212ENST00000455009 PAPPAQ13219 1627 aa26.87■■□□□ 1.89
ARPC1B-212ENST00000455009 CABP4P57796 275 aa26.86■■□□□ 1.89
ARPC1B-212ENST00000455009 MTHFSDQ2M296 383 aaKnown RBP26.86■■□□□ 1.89
ARPC1B-212ENST00000455009 NEFMP07197 916 aa26.85■■□□□ 1.89
ARPC1B-212ENST00000455009 PRKAR2BP31323 418 aa26.85■■□□□ 1.89
ARPC1B-212ENST00000455009 SLC15A2Q16348 729 aa26.85■■□□□ 1.89
ARPC1B-212ENST00000455009 RSPH6AQ9H0K4 717 aa26.85■■□□□ 1.89
ARPC1B-212ENST00000455009 ANO8Q9HCE9 1232 aaPredicted RBP26.85■■□□□ 1.89
ARPC1B-212ENST00000455009 PNNQ9H307 717 aaKnown RBP26.84■■□□□ 1.89
ARPC1B-212ENST00000455009 LRRC4BQ9NT99 713 aa26.83■■□□□ 1.89
ARPC1B-212ENST00000455009 SCN11AQ9UI33 1791 aa26.82■■□□□ 1.88
ARPC1B-212ENST00000455009 PRKRIP1Q9H875 184 aaPredicted RBP26.82■■□□□ 1.88
ARPC1B-212ENST00000455009 MAP3K5Q99683 1374 aa26.81■■□□□ 1.88
ARPC1B-212ENST00000455009 LRP5O75197 1615 aa26.79■■□□□ 1.88
ARPC1B-212ENST00000455009 GNAT3A8MTJ3 354 aa26.79■■□□□ 1.88
ARPC1B-212ENST00000455009 ASAP1Q9ULH1 1129 aa26.78■■□□□ 1.88
ARPC1B-212ENST00000455009 MRC1P22897 1456 aa26.78■■□□□ 1.88
ARPC1B-212ENST00000455009 C5P01031 1676 aa26.78■■□□□ 1.88
ARPC1B-212ENST00000455009 ADAMTS7Q9UKP4 1686 aa26.77■■□□□ 1.88
ARPC1B-212ENST00000455009 RNMTO43148 476 aaKnown RBP26.77■■□□□ 1.88
ARPC1B-212ENST00000455009 SLC52A2Q9HAB3 445 aa26.77■■□□□ 1.88
ARPC1B-212ENST00000455009 ATG3Q9NT62 314 aa26.77■■□□□ 1.88
ARPC1B-212ENST00000455009 LOC102724428A0A0B4J2F2 783 aa26.76■■□□□ 1.87
ARPC1B-212ENST00000455009 SIK1P57059 783 aa26.76■■□□□ 1.87
ARPC1B-212ENST00000455009 NFATC2IPQ8NCF5 419 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms