RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 CANXP27824 592 aaKnown RBP27.55■■■□□ 2
CTU2-202ENST00000453996 HTATSF1O43719 755 aaKnown RBP27.55■■■□□ 2
CTU2-202ENST00000453996 CCDC136Q96JN2 1154 aa27.54■■■□□ 2
CTU2-202ENST00000453996 KIAA0232Q92628 1395 aa27.54■■■□□ 2
CTU2-202ENST00000453996 MAP3K5Q99683 1374 aa27.54■■■□□ 2
CTU2-202ENST00000453996 CRB1P82279 1406 aa27.53■■■□□ 2
CTU2-202ENST00000453996 GNAT3A8MTJ3 354 aa27.52■■■□□ 2
CTU2-202ENST00000453996 BCL2L13Q9BXK5 485 aa27.52■■■□□ 2
CTU2-202ENST00000453996 PDE3AQ14432 1141 aa27.51■■□□□ 1.99
CTU2-202ENST00000453996 FRAT1Q92837 279 aaPredicted RBP27.5■■□□□ 1.99
CTU2-202ENST00000453996 ZNF428Q96B54 188 aa27.5■■□□□ 1.99
CTU2-202ENST00000453996 AHDC1Q5TGY3 1603 aaPredicted RBP27.5■■□□□ 1.99
CTU2-202ENST00000453996 SMC4Q9NTJ3 1288 aa27.5■■□□□ 1.99
CTU2-202ENST00000453996 CHL1O00533 1208 aa27.48■■□□□ 1.99
CTU2-202ENST00000453996 CHRNA2Q15822 529 aa27.48■■□□□ 1.99
CTU2-202ENST00000453996 SSH1Q8WYL5 1049 aa27.48■■□□□ 1.99
CTU2-202ENST00000453996 ALDH1L2Q3SY69 923 aa27.47■■□□□ 1.99
CTU2-202ENST00000453996 HAP1P54257 671 aaPredicted RBP27.46■■□□□ 1.99
CTU2-202ENST00000453996 PLEKHO1Q53GL0 409 aaPredicted RBP27.45■■□□□ 1.99
CTU2-202ENST00000453996 AMOTQ4VCS5 1084 aa27.45■■□□□ 1.98
CTU2-202ENST00000453996 VAMP4O75379 141 aa27.44■■□□□ 1.98
CTU2-202ENST00000453996 PRDM11Q9NQV5 511 aa27.44■■□□□ 1.98
CTU2-202ENST00000453996 TWISTNBQ3B726 338 aaPredicted RBP27.43■■□□□ 1.98
CTU2-202ENST00000453996 NLRP2Q9NX02 1062 aa27.43■■□□□ 1.98
CTU2-202ENST00000453996 CSB-PGBD3P0DP91 1061 aa27.43■■□□□ 1.98
CTU2-202ENST00000453996 ZKSCAN2Q63HK3 967 aa27.43■■□□□ 1.98
CTU2-202ENST00000453996 TSPYL6Q8N831 410 aa27.43■■□□□ 1.98
CTU2-202ENST00000453996 KIF16BQ96L93 1317 aa27.42■■□□□ 1.98
CTU2-202ENST00000453996 C8orf58Q8NAV2 365 aa27.42■■□□□ 1.98
CTU2-202ENST00000453996 VIRMAQ69YN4 1812 aaKnown RBP27.42■■□□□ 1.98
CTU2-202ENST00000453996 ZNF530Q6P9A1 599 aaPredicted RBP27.4■■□□□ 1.98
CTU2-202ENST00000453996 PANK1Q8TE04 598 aa27.4■■□□□ 1.98
CTU2-202ENST00000453996 COL22A1Q8NFW1 1626 aaPredicted RBP27.4■■□□□ 1.98
CTU2-202ENST00000453996 AKAP4Q5JQC9 854 aa27.4■■□□□ 1.98
CTU2-202ENST00000453996 IL17REQ8NFR9 667 aa27.4■■□□□ 1.98
CTU2-202ENST00000453996 TSPYL4Q9UJ04 414 aa27.4■■□□□ 1.98
CTU2-202ENST00000453996 MS4A1P11836 297 aa27.39■■□□□ 1.98
CTU2-202ENST00000453996 CEMIPQ8WUJ3 1361 aa27.38■■□□□ 1.97
CTU2-202ENST00000453996 PLEKHG2Q9H7P9 1386 aa27.38■■□□□ 1.97
CTU2-202ENST00000453996 ELL2O00472 640 aaPredicted RBP27.38■■□□□ 1.97
CTU2-202ENST00000453996 BRPF1P55201 1214 aaPredicted RBP27.38■■□□□ 1.97
CTU2-202ENST00000453996 RAPGEF4Q8WZA2 1011 aa27.38■■□□□ 1.97
CTU2-202ENST00000453996 C1orf141Q5JVX7 400 aa27.37■■□□□ 1.97
CTU2-202ENST00000453996 PHLPP1O60346 1717 aa27.36■■□□□ 1.97
CTU2-202ENST00000453996 COL5A2P05997 1499 aaPredicted RBP27.36■■□□□ 1.97
CTU2-202ENST00000453996 BABAM1Q9NWV8 329 aa27.36■■□□□ 1.97
CTU2-202ENST00000453996 NOB1Q9ULX3 412 aaKnown RBP27.36■■□□□ 1.97
CTU2-202ENST00000453996 COG6Q9Y2V7 657 aa27.36■■□□□ 1.97
CTU2-202ENST00000453996 OVOS2A0A0G2JMS6 1433 aa27.35■■□□□ 1.97
CTU2-202ENST00000453996 IPO8O15397 1037 aaKnown RBP27.35■■□□□ 1.97
CTU2-202ENST00000453996 TNNQ9UQP3 1299 aa27.35■■□□□ 1.97
CTU2-202ENST00000453996 RLBP1P12271 317 aa27.35■■□□□ 1.97
CTU2-202ENST00000453996 ATF7IPQ6VMQ6 1270 aa27.35■■□□□ 1.97
CTU2-202ENST00000453996 FTSJ3Q8IY81 847 aaKnown RBP27.35■■□□□ 1.97
CTU2-202ENST00000453996 MIS18AQ9NYP9 233 aa27.35■■□□□ 1.97
CTU2-202ENST00000453996 MEGF6O75095 1541 aa27.34■■□□□ 1.97
CTU2-202ENST00000453996 TATP17735 454 aaPredicted RBP27.34■■□□□ 1.97
CTU2-202ENST00000453996 TAF7Q15545 349 aaPredicted RBP27.34■■□□□ 1.97
CTU2-202ENST00000453996 DZIP1LQ8IYY4 767 aaKnown RBP27.34■■□□□ 1.97
CTU2-202ENST00000453996 PKD1L3Q7Z443 1732 aa27.34■■□□□ 1.97
CTU2-202ENST00000453996 WDR17Q8IZU2 1322 aa27.34■■□□□ 1.97
CTU2-202ENST00000453996 MRPL50Q8N5N7 158 aaKnown RBP27.33■■□□□ 1.97
CTU2-202ENST00000453996 CLUAP1Q96AJ1 413 aa27.33■■□□□ 1.97
CTU2-202ENST00000453996 ADAMTS7Q9UKP4 1686 aa27.33■■□□□ 1.97
CTU2-202ENST00000453996 TRIM27P14373 513 aa27.32■■□□□ 1.96
CTU2-202ENST00000453996 COL16A1Q07092 1604 aaPredicted RBP27.32■■□□□ 1.96
CTU2-202ENST00000453996 PARP4Q9UKK3 1724 aaKnown RBP27.32■■□□□ 1.96
CTU2-202ENST00000453996 KRT24Q2M2I5 525 aa27.32■■□□□ 1.96
CTU2-202ENST00000453996 KDM3BQ7LBC6 1761 aa27.32■■□□□ 1.96
CTU2-202ENST00000453996 TOM1O60784 492 aa27.3■■□□□ 1.96
CTU2-202ENST00000453996 AAMPQ13685 434 aa27.3■■□□□ 1.96
CTU2-202ENST00000453996 LGR6Q9HBX8 967 aa27.3■■□□□ 1.96
CTU2-202ENST00000453996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.3■■□□□ 1.96
CTU2-202ENST00000453996 COL14A1Q05707 1796 aaKnown RBP27.29■■□□□ 1.96
CTU2-202ENST00000453996 SPG7Q9UQ90 795 aa27.29■■□□□ 1.96
CTU2-202ENST00000453996 MVPQ14764 893 aaKnown RBP27.28■■□□□ 1.96
CTU2-202ENST00000453996 SIPA1L3O60292 1781 aaPredicted RBP27.28■■□□□ 1.96
CTU2-202ENST00000453996 RNMTO43148 476 aaKnown RBP27.27■■□□□ 1.96
CTU2-202ENST00000453996 MPRIPQ6WCQ1 1025 aa27.27■■□□□ 1.96
CTU2-202ENST00000453996 ARHGAP45Q92619 1136 aa27.27■■□□□ 1.96
CTU2-202ENST00000453996 SCN11AQ9UI33 1791 aa27.27■■□□□ 1.96
CTU2-202ENST00000453996 TEFQ10587 303 aa27.27■■□□□ 1.96
CTU2-202ENST00000453996 TOM1L2Q6ZVM7 507 aa27.27■■□□□ 1.96
CTU2-202ENST00000453996 TCERG1O14776 1098 aaKnown RBP27.26■■□□□ 1.95
CTU2-202ENST00000453996 SOS1Q07889 1333 aaPredicted RBP27.25■■□□□ 1.95
CTU2-202ENST00000453996 CARD10Q9BWT7 1032 aa27.22■■□□□ 1.95
CTU2-202ENST00000453996 EVA1CP58658 441 aa27.22■■□□□ 1.95
CTU2-202ENST00000453996 STRN4Q9NRL3 753 aa27.22■■□□□ 1.95
CTU2-202ENST00000453996 KDM2BQ8NHM5 1336 aa27.21■■□□□ 1.95
CTU2-202ENST00000453996 PHKG2P15735 406 aa27.21■■□□□ 1.95
CTU2-202ENST00000453996 PIP4K2BP78356 416 aa27.21■■□□□ 1.95
CTU2-202ENST00000453996 ITPRIPQ8IWB1 547 aa27.21■■□□□ 1.95
CTU2-202ENST00000453996 DDX19BQ9UMR2 479 aa27.21■■□□□ 1.95
CTU2-202ENST00000453996 CENPQQ7L2Z9 268 aaPredicted RBP27.2■■□□□ 1.95
CTU2-202ENST00000453996 IFNL2Q8IZJ0 200 aa27.2■■□□□ 1.95
CTU2-202ENST00000453996 TMEM57Q8N5G2 664 aa27.2■■□□□ 1.95
CTU2-202ENST00000453996 API5Q9BZZ5 524 aaKnown RBP27.2■■□□□ 1.94
CTU2-202ENST00000453996 KDM6AO15550 1401 aaPredicted RBP27.19■■□□□ 1.94
CTU2-202ENST00000453996 BTBD11A6QL63 1104 aa27.19■■□□□ 1.94
CTU2-202ENST00000453996 LARP1Q6PKG0 1096 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms