RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 E9PSI1 815 aa16.38■□□□□ 0.21
HLA-DPA1-244ENST00000453337 MEX3CQ5U5Q3 659 aaKnown RBP16.38■□□□□ 0.21
HLA-DPA1-244ENST00000453337 FBXO41Q8TF61 875 aa16.38■□□□□ 0.21
HLA-DPA1-244ENST00000453337 RTF1Q92541 710 aaKnown RBP16.38■□□□□ 0.21
HLA-DPA1-244ENST00000453337 SPG7Q9UQ90 795 aa16.38■□□□□ 0.21
HLA-DPA1-244ENST00000453337 IL16Q14005 1332 aa16.38■□□□□ 0.21
HLA-DPA1-244ENST00000453337 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
HLA-DPA1-244ENST00000453337 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
HLA-DPA1-244ENST00000453337 FNBP4Q8N3X1 1017 aaPredicted RBP16.37■□□□□ 0.21
HLA-DPA1-244ENST00000453337 C8orf37Q96NL8 207 aa16.37■□□□□ 0.21
HLA-DPA1-244ENST00000453337 SLIT2O94813 1529 aa16.36■□□□□ 0.21
HLA-DPA1-244ENST00000453337 IL2RBP14784 551 aa16.36■□□□□ 0.21
HLA-DPA1-244ENST00000453337 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
HLA-DPA1-244ENST00000453337 UNC5CLQ8IV45 518 aa16.36■□□□□ 0.21
HLA-DPA1-244ENST00000453337 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
HLA-DPA1-244ENST00000453337 AKAP4Q5JQC9 854 aa16.35■□□□□ 0.21
HLA-DPA1-244ENST00000453337 ZNF530Q6P9A1 599 aaPredicted RBP16.35■□□□□ 0.21
HLA-DPA1-244ENST00000453337 MYH16Q9H6N6 1097 aa16.35■□□□□ 0.21
HLA-DPA1-244ENST00000453337 THRAP3Q9Y2W1 955 aaKnown RBP16.35■□□□□ 0.21
HLA-DPA1-244ENST00000453337 TRMT2AQ8IZ69 625 aaKnown RBP16.34■□□□□ 0.21
HLA-DPA1-244ENST00000453337 NRAPQ86VF7 1730 aa16.33■□□□□ 0.21
HLA-DPA1-244ENST00000453337 ZCRB1Q8TBF4 217 aaKnown RBP16.33■□□□□ 0.2
HLA-DPA1-244ENST00000453337 CDCA7Q9BWT1 371 aaPredicted RBP16.33■□□□□ 0.2
HLA-DPA1-244ENST00000453337 USP35Q9P2H5 1018 aa16.33■□□□□ 0.2
HLA-DPA1-244ENST00000453337 MAP3K5Q99683 1374 aa16.33■□□□□ 0.2
HLA-DPA1-244ENST00000453337 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.2
HLA-DPA1-244ENST00000453337 LRP6O75581 1613 aa16.32■□□□□ 0.2
HLA-DPA1-244ENST00000453337 SPATA31A1Q5TZJ5 1347 aa16.32■□□□□ 0.2
HLA-DPA1-244ENST00000453337 DUSP27Q5VZP5 1158 aa16.32■□□□□ 0.2
HLA-DPA1-244ENST00000453337 USP21Q9UK80 565 aa16.32■□□□□ 0.2
HLA-DPA1-244ENST00000453337 CCDC9Q9Y3X0 531 aaKnown RBP16.32■□□□□ 0.2
HLA-DPA1-244ENST00000453337 SPATA31A5Q5VU36 1347 aa16.31■□□□□ 0.2
HLA-DPA1-244ENST00000453337 SPATA31A7Q8IWB4 1347 aa16.31■□□□□ 0.2
HLA-DPA1-244ENST00000453337 HSP90AB1P08238 724 aaKnown RBP16.31■□□□□ 0.2
HLA-DPA1-244ENST00000453337 GNAI1P63096 354 aa16.31■□□□□ 0.2
HLA-DPA1-244ENST00000453337 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
HLA-DPA1-244ENST00000453337 VPS72Q15906 364 aa16.31■□□□□ 0.2
HLA-DPA1-244ENST00000453337 IFNL2Q8IZJ0 200 aa16.31■□□□□ 0.2
HLA-DPA1-244ENST00000453337 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
HLA-DPA1-244ENST00000453337 MEGF6O75095 1541 aa16.3■□□□□ 0.2
HLA-DPA1-244ENST00000453337 OVOS2A0A0G2JMS6 1433 aa16.3■□□□□ 0.2
HLA-DPA1-244ENST00000453337 MCM10Q7L590 875 aa16.3■□□□□ 0.2
HLA-DPA1-244ENST00000453337 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
HLA-DPA1-244ENST00000453337 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
HLA-DPA1-244ENST00000453337 THUMPD2Q9BTF0 503 aaKnown RBP16.3■□□□□ 0.2
HLA-DPA1-244ENST00000453337 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
HLA-DPA1-244ENST00000453337 PKD1L3Q7Z443 1732 aa16.3■□□□□ 0.2
HLA-DPA1-244ENST00000453337 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
HLA-DPA1-244ENST00000453337 BARGINQ6ZT62 677 aa16.29■□□□□ 0.2
HLA-DPA1-244ENST00000453337 LAS1LQ9Y4W2 734 aaKnown RBP16.29■□□□□ 0.2
HLA-DPA1-244ENST00000453337 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
HLA-DPA1-244ENST00000453337 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.28■□□□□ 0.2
HLA-DPA1-244ENST00000453337 EXOC5O00471 708 aa16.28■□□□□ 0.2
HLA-DPA1-244ENST00000453337 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
HLA-DPA1-244ENST00000453337 PHKG2P15735 406 aa16.28■□□□□ 0.2
HLA-DPA1-244ENST00000453337 AFF2P51816 1311 aa16.27■□□□□ 0.2
HLA-DPA1-244ENST00000453337 PCDH11XQ9BZA7 1347 aa16.27■□□□□ 0.2
HLA-DPA1-244ENST00000453337 PCDH11YQ9BZA8 1340 aa16.27■□□□□ 0.2
HLA-DPA1-244ENST00000453337 RNMTO43148 476 aaKnown RBP16.27■□□□□ 0.2
HLA-DPA1-244ENST00000453337 TAF7Q15545 349 aaPredicted RBP16.27■□□□□ 0.2
HLA-DPA1-244ENST00000453337 BABAM1Q9NWV8 329 aa16.27■□□□□ 0.2
HLA-DPA1-244ENST00000453337 CHL1O00533 1208 aa16.26■□□□□ 0.19
HLA-DPA1-244ENST00000453337 CYP27B1O15528 508 aa16.26■□□□□ 0.19
HLA-DPA1-244ENST00000453337 TEFQ10587 303 aa16.26■□□□□ 0.19
HLA-DPA1-244ENST00000453337 MPRIPQ6WCQ1 1025 aa16.26■□□□□ 0.19
HLA-DPA1-244ENST00000453337 DCAF5Q96JK2 942 aa16.26■□□□□ 0.19
HLA-DPA1-244ENST00000453337 LGR6Q9HBX8 967 aa16.26■□□□□ 0.19
HLA-DPA1-244ENST00000453337 NKX1-1Q15270 411 aaPredicted RBP16.25■□□□□ 0.19
HLA-DPA1-244ENST00000453337 DDX54Q8TDD1 881 aaKnown RBP16.25■□□□□ 0.19
HLA-DPA1-244ENST00000453337 TRPC5Q9UL62 973 aaPredicted RBP16.25■□□□□ 0.19
HLA-DPA1-244ENST00000453337 DISP2A7MBM2 1401 aa16.25■□□□□ 0.19
HLA-DPA1-244ENST00000453337 CEMIPQ8WUJ3 1361 aa16.25■□□□□ 0.19
HLA-DPA1-244ENST00000453337 WNK3Q9BYP7 1800 aa16.24■□□□□ 0.19
HLA-DPA1-244ENST00000453337 SCN11AQ9UI33 1791 aa16.24■□□□□ 0.19
HLA-DPA1-244ENST00000453337 CT47B1P0C2W7 299 aaPredicted RBP16.24■□□□□ 0.19
HLA-DPA1-244ENST00000453337 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
HLA-DPA1-244ENST00000453337 TSR2Q969E8 191 aaKnown RBP16.23■□□□□ 0.19
HLA-DPA1-244ENST00000453337 GJD4Q96KN9 370 aaPredicted RBP16.23■□□□□ 0.19
HLA-DPA1-244ENST00000453337 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
HLA-DPA1-244ENST00000453337 RCAN3Q9UKA8 241 aa16.23■□□□□ 0.19
HLA-DPA1-244ENST00000453337 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
HLA-DPA1-244ENST00000453337 DDB1Q16531 1140 aa16.22■□□□□ 0.19
HLA-DPA1-244ENST00000453337 QTRT2Q9H974 415 aaKnown RBP16.22■□□□□ 0.19
HLA-DPA1-244ENST00000453337 TSPYL4Q9UJ04 414 aa16.22■□□□□ 0.19
HLA-DPA1-244ENST00000453337 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.19
HLA-DPA1-244ENST00000453337 EXOSC9Q06265 439 aaKnown RBP16.21■□□□□ 0.19
HLA-DPA1-244ENST00000453337 ZNF772Q68DY9 489 aaPredicted RBP16.21■□□□□ 0.19
HLA-DPA1-244ENST00000453337 SHANK3Q9BYB0 1731 aa16.2■□□□□ 0.18
HLA-DPA1-244ENST00000453337 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
HLA-DPA1-244ENST00000453337 FAM98CQ17RN3 349 aaKnown RBP16.2■□□□□ 0.18
HLA-DPA1-244ENST00000453337 SUPT16HQ9Y5B9 1047 aaKnown RBP16.2■□□□□ 0.18
HLA-DPA1-244ENST00000453337 ATRNO75882 1429 aa16.19■□□□□ 0.18
HLA-DPA1-244ENST00000453337 LRRC37A3O60309 1634 aa16.19■□□□□ 0.18
HLA-DPA1-244ENST00000453337 CABP4P57796 275 aa16.19■□□□□ 0.18
HLA-DPA1-244ENST00000453337 ZNF428Q96B54 188 aa16.19■□□□□ 0.18
HLA-DPA1-244ENST00000453337 SLC52A2Q9HAB3 445 aa16.19■□□□□ 0.18
HLA-DPA1-244ENST00000453337 MIS18AQ9NYP9 233 aa16.19■□□□□ 0.18
HLA-DPA1-244ENST00000453337 BTBD11A6QL63 1104 aa16.18■□□□□ 0.18
HLA-DPA1-244ENST00000453337 ONECUT3O60422 494 aaPredicted RBP16.18■□□□□ 0.18
HLA-DPA1-244ENST00000453337 NFATC2IPQ8NCF5 419 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms