RNA–Protein interactions for RNA: ENST00000453166.2

IGKV2D-28-201, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

APPRIS P1

Gene IGKV2D-28, Length 396 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-201ENST00000453166 IGSF1Q8N6C5 1336 aa16.12■□□□□ 0.17
IGKV2D-28-201ENST00000453166 NSD2O96028 1365 aa16.12■□□□□ 0.17
IGKV2D-28-201ENST00000453166 NLRP2Q9NX02 1062 aa16.11■□□□□ 0.17
IGKV2D-28-201ENST00000453166 TOGARAM1Q9Y4F4 1720 aa16.1■□□□□ 0.17
IGKV2D-28-201ENST00000453166 SYTL4Q96C24 671 aaPredicted RBP16.09■□□□□ 0.17
IGKV2D-28-201ENST00000453166 CCNL1Q9UK58 526 aaPredicted RBP16.09■□□□□ 0.17
IGKV2D-28-201ENST00000453166 NMRK2Q9NPI5 230 aa16.08■□□□□ 0.16
IGKV2D-28-201ENST00000453166 TTC21BQ7Z4L5 1316 aa16.08■□□□□ 0.16
IGKV2D-28-201ENST00000453166 ANKRD36BQ8N2N9 1353 aa16.08■□□□□ 0.16
IGKV2D-28-201ENST00000453166 STAC3Q96MF2 364 aa16.07■□□□□ 0.16
IGKV2D-28-201ENST00000453166 MON2Q7Z3U7 1717 aa16.07■□□□□ 0.16
IGKV2D-28-201ENST00000453166 KIAA1551Q9HCM1 1747 aa16.07■□□□□ 0.16
IGKV2D-28-201ENST00000453166 FAM208AQ9UK61 1670 aaKnown RBP16.06■□□□□ 0.16
IGKV2D-28-201ENST00000453166 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
IGKV2D-28-201ENST00000453166 PRIM1P49642 420 aaKnown RBP16.06■□□□□ 0.16
IGKV2D-28-201ENST00000453166 DDX54Q8TDD1 881 aaKnown RBP16.06■□□□□ 0.16
IGKV2D-28-201ENST00000453166 UBR3Q6ZT12 1888 aa16.05■□□□□ 0.16
IGKV2D-28-201ENST00000453166 PCNTO95613 3336 aa16.05■□□□□ 0.16
IGKV2D-28-201ENST00000453166 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
IGKV2D-28-201ENST00000453166 KIF13BQ9NQT8 1826 aa16.03■□□□□ 0.16
IGKV2D-28-201ENST00000453166 RGPD2P0DJD1 1756 aa16.03■□□□□ 0.16
IGKV2D-28-201ENST00000453166 PKD1L3Q7Z443 1732 aa16.03■□□□□ 0.16
IGKV2D-28-201ENST00000453166 TTC21AQ8NDW8 1320 aa16.03■□□□□ 0.16
IGKV2D-28-201ENST00000453166 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
IGKV2D-28-201ENST00000453166 C4BP0C0L5 1744 aa16.02■□□□□ 0.16
IGKV2D-28-201ENST00000453166 NBPF1Q3BBV0 1214 aa16.02■□□□□ 0.16
IGKV2D-28-201ENST00000453166 ANKRD24Q8TF21 1146 aa16.02■□□□□ 0.16
IGKV2D-28-201ENST00000453166 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
IGKV2D-28-201ENST00000453166 USP47Q96K76 1375 aa16■□□□□ 0.15
IGKV2D-28-201ENST00000453166 HSPA1AP0DMV8 641 aaKnown RBP15.99■□□□□ 0.15
IGKV2D-28-201ENST00000453166 HSPA1BP0DMV9 641 aaKnown RBP15.99■□□□□ 0.15
IGKV2D-28-201ENST00000453166 PXDNLA1KZ92 1463 aa15.98■□□□□ 0.15
IGKV2D-28-201ENST00000453166 AMIGO3Q86WK7 504 aa15.98■□□□□ 0.15
IGKV2D-28-201ENST00000453166 TNRC6CQ9HCJ0 1690 aaKnown RBP15.98■□□□□ 0.15
IGKV2D-28-201ENST00000453166 FLAD1Q8NFF5 587 aa15.97■□□□□ 0.15
IGKV2D-28-201ENST00000453166 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
IGKV2D-28-201ENST00000453166 USP31Q70CQ4 1352 aa15.97■□□□□ 0.15
IGKV2D-28-201ENST00000453166 KTN1Q86UP2 1357 aaKnown RBP15.97■□□□□ 0.15
IGKV2D-28-201ENST00000453166 MEGF6O75095 1541 aa15.96■□□□□ 0.15
IGKV2D-28-201ENST00000453166 KCPQ6ZWJ8 1503 aa15.96■□□□□ 0.15
IGKV2D-28-201ENST00000453166 FSTL1Q12841 308 aa15.96■□□□□ 0.15
IGKV2D-28-201ENST00000453166 SMIM5Q71RC9 77 aa15.96■□□□□ 0.15
IGKV2D-28-201ENST00000453166 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.15
IGKV2D-28-201ENST00000453166 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.14
IGKV2D-28-201ENST00000453166 ITGB4P16144 1822 aa15.95■□□□□ 0.14
IGKV2D-28-201ENST00000453166 RAB3GAP2Q9H2M9 1393 aa15.94■□□□□ 0.14
IGKV2D-28-201ENST00000453166 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
IGKV2D-28-201ENST00000453166 PHF14O94880 888 aa15.93■□□□□ 0.14
IGKV2D-28-201ENST00000453166 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.93■□□□□ 0.14
IGKV2D-28-201ENST00000453166 BCS1LQ9Y276 419 aa15.93■□□□□ 0.14
IGKV2D-28-201ENST00000453166 PALLDQ8WX93 1383 aa15.92■□□□□ 0.14
IGKV2D-28-201ENST00000453166 PLEKHG2Q9H7P9 1386 aa15.92■□□□□ 0.14
IGKV2D-28-201ENST00000453166 NME9Q86XW9 330 aa15.92■□□□□ 0.14
IGKV2D-28-201ENST00000453166 SBF1O95248 1867 aa15.92■□□□□ 0.14
IGKV2D-28-201ENST00000453166 C10orf71Q711Q0 1435 aa15.92■□□□□ 0.14
IGKV2D-28-201ENST00000453166 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
IGKV2D-28-201ENST00000453166 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
IGKV2D-28-201ENST00000453166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.9■□□□□ 0.14
IGKV2D-28-201ENST00000453166 ARHGAP27Q6ZUM4 889 aa15.9■□□□□ 0.14
IGKV2D-28-201ENST00000453166 AK7Q96M32 723 aa15.9■□□□□ 0.14
IGKV2D-28-201ENST00000453166 C9orf131Q5VYM1 1079 aa15.89■□□□□ 0.13
IGKV2D-28-201ENST00000453166 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
IGKV2D-28-201ENST00000453166 SBNO2Q9Y2G9 1366 aa15.88■□□□□ 0.13
IGKV2D-28-201ENST00000453166 NSD3Q9BZ95 1437 aa15.88■□□□□ 0.13
IGKV2D-28-201ENST00000453166 CD163L1Q9NR16 1453 aa15.88■□□□□ 0.13
IGKV2D-28-201ENST00000453166 IP6K1Q92551 441 aa15.87■□□□□ 0.13
IGKV2D-28-201ENST00000453166 A0A0G2JLW4 131 aa15.86■□□□□ 0.13
IGKV2D-28-201ENST00000453166 SMC1BQ8NDV3 1235 aa15.86■□□□□ 0.13
IGKV2D-28-201ENST00000453166 RRAGCQ9HB90 399 aa15.86■□□□□ 0.13
IGKV2D-28-201ENST00000453166 PCDH10Q9P2E7 1040 aa15.86■□□□□ 0.13
IGKV2D-28-201ENST00000453166 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
IGKV2D-28-201ENST00000453166 MMP10P09238 476 aa15.85■□□□□ 0.13
IGKV2D-28-201ENST00000453166 SSFA2P28290 1259 aa15.85■□□□□ 0.13
IGKV2D-28-201ENST00000453166 C4AP0C0L4 1744 aa15.85■□□□□ 0.13
IGKV2D-28-201ENST00000453166 FCHSD2O94868 740 aa15.84■□□□□ 0.13
IGKV2D-28-201ENST00000453166 TGFB2P61812 414 aa15.84■□□□□ 0.13
IGKV2D-28-201ENST00000453166 DPEP1P16444 411 aa15.82■□□□□ 0.12
IGKV2D-28-201ENST00000453166 HMGB2P26583 209 aaKnown RBP15.82■□□□□ 0.12
IGKV2D-28-201ENST00000453166 MPRIPQ6WCQ1 1025 aa15.82■□□□□ 0.12
IGKV2D-28-201ENST00000453166 FAM161AQ3B820 660 aa15.81■□□□□ 0.12
IGKV2D-28-201ENST00000453166 LINC00116Q8NCU8 138 aa15.81■□□□□ 0.12
IGKV2D-28-201ENST00000453166 RNF181Q9P0P0 153 aa15.81■□□□□ 0.12
IGKV2D-28-201ENST00000453166 EDC4Q6P2E9 1401 aaKnown RBP15.8■□□□□ 0.12
IGKV2D-28-201ENST00000453166 CCDC88AQ3V6T2 1871 aa15.8■□□□□ 0.12
IGKV2D-28-201ENST00000453166 TIAM2Q8IVF5 1701 aa15.8■□□□□ 0.12
IGKV2D-28-201ENST00000453166 MAP3K19Q56UN5 1328 aa15.79■□□□□ 0.12
IGKV2D-28-201ENST00000453166 HOXC9P31274 260 aa15.79■□□□□ 0.12
IGKV2D-28-201ENST00000453166 USHBP1Q8N6Y0 703 aa15.79■□□□□ 0.12
IGKV2D-28-201ENST00000453166 GNPATO15228 680 aa15.78■□□□□ 0.12
IGKV2D-28-201ENST00000453166 SMARCC1Q92922 1105 aaPredicted RBP15.78■□□□□ 0.12
IGKV2D-28-201ENST00000453166 PCDH11XQ9BZA7 1347 aa15.77■□□□□ 0.12
IGKV2D-28-201ENST00000453166 PCDH11YQ9BZA8 1340 aa15.77■□□□□ 0.12
IGKV2D-28-201ENST00000453166 FOXN1O15353 648 aa15.77■□□□□ 0.12
IGKV2D-28-201ENST00000453166 KCNA3P22001 575 aa15.77■□□□□ 0.12
IGKV2D-28-201ENST00000453166 CGNL1Q0VF96 1302 aa15.76■□□□□ 0.11
IGKV2D-28-201ENST00000453166 FBLN1P23142 703 aa15.76■□□□□ 0.11
IGKV2D-28-201ENST00000453166 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
IGKV2D-28-201ENST00000453166 DCAF5Q96JK2 942 aa15.76■□□□□ 0.11
IGKV2D-28-201ENST00000453166 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
IGKV2D-28-201ENST00000453166 A0A1W2PP64 1363 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms