RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 PKD1L3Q7Z443 1732 aa20.99■□□□□ 0.95
VPS8-213ENST00000453056 APBA3O96018 575 aa20.99■□□□□ 0.95
VPS8-213ENST00000453056 DDX54Q8TDD1 881 aaKnown RBP20.99■□□□□ 0.95
VPS8-213ENST00000453056 RGPD3A6NKT7 1758 aaPredicted RBP20.98■□□□□ 0.95
VPS8-213ENST00000453056 RGPD4Q7Z3J3 1758 aa20.98■□□□□ 0.95
VPS8-213ENST00000453056 BCL11BQ9C0K0 894 aaPredicted RBP20.98■□□□□ 0.95
VPS8-213ENST00000453056 PLEKHG2Q9H7P9 1386 aa20.97■□□□□ 0.95
VPS8-213ENST00000453056 MTHFSP49914 203 aa20.97■□□□□ 0.95
VPS8-213ENST00000453056 EN1Q05925 392 aaPredicted RBP20.97■□□□□ 0.95
VPS8-213ENST00000453056 IGSF1Q8N6C5 1336 aa20.97■□□□□ 0.95
VPS8-213ENST00000453056 PCDH11XQ9BZA7 1347 aa20.97■□□□□ 0.95
VPS8-213ENST00000453056 PCDH11YQ9BZA8 1340 aa20.97■□□□□ 0.95
VPS8-213ENST00000453056 DOT1LQ8TEK3 1739 aa20.95■□□□□ 0.94
VPS8-213ENST00000453056 RREB1Q92766 1687 aa20.93■□□□□ 0.94
VPS8-213ENST00000453056 SPG7Q9UQ90 795 aa20.93■□□□□ 0.94
VPS8-213ENST00000453056 BTAF1O14981 1849 aa20.92■□□□□ 0.94
VPS8-213ENST00000453056 ACSBG1Q96GR2 724 aa20.92■□□□□ 0.94
VPS8-213ENST00000453056 IL13P35225 146 aa20.91■□□□□ 0.94
VPS8-213ENST00000453056 EZH2Q15910 746 aaKnown RBP20.91■□□□□ 0.94
VPS8-213ENST00000453056 CAMKK2Q96RR4 588 aa20.91■□□□□ 0.94
VPS8-213ENST00000453056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.91■□□□□ 0.942e-6■■■■□ 20.1
VPS8-213ENST00000453056 DIAPH1O60610 1272 aaKnown RBP20.9■□□□□ 0.94
VPS8-213ENST00000453056 CFAP53Q96M91 514 aa20.9■□□□□ 0.94
VPS8-213ENST00000453056 NUP188Q5SRE5 1749 aa20.89■□□□□ 0.93
VPS8-213ENST00000453056 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
VPS8-213ENST00000453056 KDRP35968 1356 aa20.88■□□□□ 0.93
VPS8-213ENST00000453056 PLSCR1O15162 318 aa20.88■□□□□ 0.93
VPS8-213ENST00000453056 KCNQ2O43526 872 aa20.88■□□□□ 0.93
VPS8-213ENST00000453056 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
VPS8-213ENST00000453056 SULT6B1Q6IMI4 303 aa20.87■□□□□ 0.93
VPS8-213ENST00000453056 PTF1AQ7RTS3 328 aa20.87■□□□□ 0.93
VPS8-213ENST00000453056 SYTL4Q96C24 671 aaPredicted RBP20.87■□□□□ 0.93
VPS8-213ENST00000453056 CYP27B1O15528 508 aa20.86■□□□□ 0.93
VPS8-213ENST00000453056 AEBP1Q8IUX7 1158 aa20.86■□□□□ 0.93
VPS8-213ENST00000453056 PPP2R1AP30153 589 aa20.85■□□□□ 0.93
VPS8-213ENST00000453056 AMOTQ4VCS5 1084 aa20.85■□□□□ 0.93
VPS8-213ENST00000453056 PLEKHO1Q53GL0 409 aaPredicted RBP20.85■□□□□ 0.93
VPS8-213ENST00000453056 PRIM1P49642 420 aaKnown RBP20.84■□□□□ 0.93
VPS8-213ENST00000453056 IFNL2Q8IZJ0 200 aa20.84■□□□□ 0.93
VPS8-213ENST00000453056 TOGARAM1Q9Y4F4 1720 aa20.83■□□□□ 0.92
VPS8-213ENST00000453056 ITGB4P16144 1822 aa20.83■□□□□ 0.92
VPS8-213ENST00000453056 NBPF14Q5TI25 921 aa20.82■□□□□ 0.92
VPS8-213ENST00000453056 U2SURPO15042 1029 aaKnown RBP20.81■□□□□ 0.92
VPS8-213ENST00000453056 HSP90AB1P08238 724 aaKnown RBP20.81■□□□□ 0.92
VPS8-213ENST00000453056 PHKG2P15735 406 aa20.81■□□□□ 0.92
VPS8-213ENST00000453056 NKX1-1Q15270 411 aaPredicted RBP20.81■□□□□ 0.92
VPS8-213ENST00000453056 ZNF530Q6P9A1 599 aaPredicted RBP20.81■□□□□ 0.92
VPS8-213ENST00000453056 NUDCQ9Y266 331 aa20.81■□□□□ 0.92
VPS8-213ENST00000453056 HMOX1P09601 288 aa20.8■□□□□ 0.92
VPS8-213ENST00000453056 RALBP1Q15311 655 aa20.8■□□□□ 0.92
VPS8-213ENST00000453056 C1orf141Q5JVX7 400 aa20.8■□□□□ 0.92
VPS8-213ENST00000453056 TXNRD1Q16881 649 aa20.79■□□□□ 0.92
VPS8-213ENST00000453056 LY75O60449 1722 aa20.78■□□□□ 0.92
VPS8-213ENST00000453056 R3HDM1Q15032 1099 aaKnown RBP20.76■□□□□ 0.91
VPS8-213ENST00000453056 PSDA5PKW4 1024 aaPredicted RBP20.75■□□□□ 0.91
VPS8-213ENST00000453056 SLC27A3Q5K4L6 730 aa20.75■□□□□ 0.91
VPS8-213ENST00000453056 MPRIPQ6WCQ1 1025 aa20.75■□□□□ 0.91
VPS8-213ENST00000453056 DCAF5Q96JK2 942 aa20.75■□□□□ 0.91
VPS8-213ENST00000453056 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
VPS8-213ENST00000453056 ZNF316A6NFI3 1004 aaPredicted RBP20.74■□□□□ 0.91
VPS8-213ENST00000453056 PROM2Q8N271 834 aa20.73■□□□□ 0.91
VPS8-213ENST00000453056 SMARCC1Q92922 1105 aaPredicted RBP20.73■□□□□ 0.91
VPS8-213ENST00000453056 SCN11AQ9UI33 1791 aa20.72■□□□□ 0.91
VPS8-213ENST00000453056 PAPPAQ13219 1627 aa20.72■□□□□ 0.91
VPS8-213ENST00000453056 VIRMAQ69YN4 1812 aaKnown RBP20.72■□□□□ 0.91
VPS8-213ENST00000453056 U2AF1L5P0DN76 240 aaPredicted RBP20.72■□□□□ 0.91
VPS8-213ENST00000453056 U2AF1Q01081 240 aaKnown RBP eCLIP20.72■□□□□ 0.91
VPS8-213ENST00000453056 STK32BQ9NY57 414 aa20.72■□□□□ 0.91
VPS8-213ENST00000453056 MYBBP1AQ9BQG0 1328 aaKnown RBP20.72■□□□□ 0.91
VPS8-213ENST00000453056 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
VPS8-213ENST00000453056 KDM6AO15550 1401 aaPredicted RBP20.71■□□□□ 0.91
VPS8-213ENST00000453056 ERVV-2B6SEH9 535 aa20.71■□□□□ 0.91
VPS8-213ENST00000453056 HMGB2P26583 209 aaKnown RBP20.71■□□□□ 0.91
VPS8-213ENST00000453056 AKAP4Q5JQC9 854 aa20.71■□□□□ 0.91
VPS8-213ENST00000453056 ANO8Q9HCE9 1232 aaPredicted RBP20.71■□□□□ 0.91
VPS8-213ENST00000453056 GAS2L2Q8NHY3 880 aa20.7■□□□□ 0.9
VPS8-213ENST00000453056 PIGBQ92521 554 aa20.7■□□□□ 0.9
VPS8-213ENST00000453056 CCNL1Q9UK58 526 aaPredicted RBP20.7■□□□□ 0.9
VPS8-213ENST00000453056 PRKAR2BP31323 418 aa20.68■□□□□ 0.9
VPS8-213ENST00000453056 CABP4P57796 275 aa20.68■□□□□ 0.9
VPS8-213ENST00000453056 RSPH6AQ9H0K4 717 aa20.68■□□□□ 0.9
VPS8-213ENST00000453056 FCHSD2O94868 740 aa20.67■□□□□ 0.9
VPS8-213ENST00000453056 MTHFSDQ2M296 383 aaKnown RBP20.67■□□□□ 0.9
VPS8-213ENST00000453056 LRP5O75197 1615 aa20.67■□□□□ 0.9
VPS8-213ENST00000453056 C5P01031 1676 aa20.67■□□□□ 0.9
VPS8-213ENST00000453056 SRCAPQ6ZRS2 3230 aa20.66■□□□□ 0.9
VPS8-213ENST00000453056 NEFMP07197 916 aa20.66■□□□□ 0.9
VPS8-213ENST00000453056 LRRC4BQ9NT99 713 aa20.66■□□□□ 0.9
VPS8-213ENST00000453056 TAF1LQ8IZX4 1826 aa20.65■□□□□ 0.9
VPS8-213ENST00000453056 MAP3K5Q99683 1374 aa20.65■□□□□ 0.9
VPS8-213ENST00000453056 SLC15A2Q16348 729 aa20.65■□□□□ 0.9
VPS8-213ENST00000453056 PRKRIP1Q9H875 184 aaPredicted RBP20.65■□□□□ 0.9
VPS8-213ENST00000453056 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.9
VPS8-213ENST00000453056 ADAMTS7Q9UKP4 1686 aa20.64■□□□□ 0.9
VPS8-213ENST00000453056 MRC1P22897 1456 aa20.64■□□□□ 0.89
VPS8-213ENST00000453056 CASZ1Q86V15 1759 aa20.64■□□□□ 0.89
VPS8-213ENST00000453056 RNMTO43148 476 aaKnown RBP20.62■□□□□ 0.89
VPS8-213ENST00000453056 PNNQ9H307 717 aaKnown RBP20.62■□□□□ 0.89
VPS8-213ENST00000453056 ASAP1Q9ULH1 1129 aa20.62■□□□□ 0.89
VPS8-213ENST00000453056 LOC102724428A0A0B4J2F2 783 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms