RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ZNF395Q9H8N7 513 aaPredicted RBP5.96□□□□□ -1.46
LRCH3-209ENST00000452660 LRRC4BQ9NT99 713 aa5.96□□□□□ -1.46
LRCH3-209ENST00000452660 ATP5J2-PTCD1G3V325 749 aa5.95□□□□□ -1.46
LRCH3-209ENST00000452660 ERVK-9P63128 1117 aa5.95□□□□□ -1.46
LRCH3-209ENST00000452660 RNFT1Q5M7Z0 435 aa5.95□□□□□ -1.46
LRCH3-209ENST00000452660 FOXK2Q01167 660 aa5.94□□□□□ -1.46
LRCH3-209ENST00000452660 RASSF7Q02833 373 aa5.94□□□□□ -1.46
LRCH3-209ENST00000452660 NR1H3Q13133 447 aa5.94□□□□□ -1.46
LRCH3-209ENST00000452660 CC2D2BQ6DHV5 1058 aa5.94□□□□□ -1.46
LRCH3-209ENST00000452660 TRIM22Q8IYM9 498 aa5.94□□□□□ -1.46
LRCH3-209ENST00000452660 SVOPQ8N4V2 548 aa5.94□□□□□ -1.46
LRCH3-209ENST00000452660 SCARF2Q96GP6 870 aaPredicted RBP5.94□□□□□ -1.46
LRCH3-209ENST00000452660 DYRK1BQ9Y463 629 aa5.94□□□□□ -1.46
LRCH3-209ENST00000452660 CDC14CA4D256 554 aa5.93□□□□□ -1.46
LRCH3-209ENST00000452660 H7C1W4 665 aa5.93□□□□□ -1.46
LRCH3-209ENST00000452660 GDF11O95390 407 aa5.93□□□□□ -1.46
LRCH3-209ENST00000452660 IGHA1P01876 353 aa5.93□□□□□ -1.46
LRCH3-209ENST00000452660 FOXR1Q6PIV2 292 aa5.93□□□□□ -1.46
LRCH3-209ENST00000452660 CYP2U1Q7Z449 544 aa5.93□□□□□ -1.46
LRCH3-209ENST00000452660 DNMT3AQ9Y6K1 912 aaPredicted RBP5.93□□□□□ -1.46
LRCH3-209ENST00000452660 SPATA31C2B4DYI2 1134 aa5.92□□□□□ -1.46
LRCH3-209ENST00000452660 FBXO45P0C2W1 286 aa5.92□□□□□ -1.46
LRCH3-209ENST00000452660 CLN3Q13286 438 aa5.92□□□□□ -1.46
LRCH3-209ENST00000452660 ENAMQ9NRM1 1142 aa5.92□□□□□ -1.46
LRCH3-209ENST00000452660 PCDHB9Q9Y5E1 797 aa5.92□□□□□ -1.46
LRCH3-209ENST00000452660 GIGYF1O75420 1035 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-209ENST00000452660 ADAMTS2O95450 1211 aa5.91□□□□□ -1.46
LRCH3-209ENST00000452660 MAP3K10Q02779 954 aa5.91□□□□□ -1.46
LRCH3-209ENST00000452660 ZNF837Q96EG3 531 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-209ENST00000452660 GRIP2Q9C0E4 1043 aa5.91□□□□□ -1.46
LRCH3-209ENST00000452660 CYLDQ9NQC7 956 aa5.91□□□□□ -1.46
LRCH3-209ENST00000452660 MBIPQ9NS73 344 aa5.91□□□□□ -1.46
LRCH3-209ENST00000452660 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
LRCH3-209ENST00000452660 A0A1W2PRU2 124 aa5.9□□□□□ -1.46
LRCH3-209ENST00000452660 TRAK2O60296 914 aa5.9□□□□□ -1.46
LRCH3-209ENST00000452660 RAB15P59190 212 aa5.9□□□□□ -1.46
LRCH3-209ENST00000452660 GAS6Q14393 721 aa5.9□□□□□ -1.46
LRCH3-209ENST00000452660 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
LRCH3-209ENST00000452660 NDUFB9Q9Y6M9 179 aa5.9□□□□□ -1.46
LRCH3-209ENST00000452660 GNRH1P01148 92 aa5.89□□□□□ -1.47
LRCH3-209ENST00000452660 MARSP56192 900 aaKnown RBP5.89□□□□□ -1.47
LRCH3-209ENST00000452660 LBRQ14739 615 aaKnown RBP5.89□□□□□ -1.47
LRCH3-209ENST00000452660 KCTD17Q8N5Z5 321 aa5.89□□□□□ -1.47
LRCH3-209ENST00000452660 NLRP3Q96P20 1036 aa5.89□□□□□ -1.47
LRCH3-209ENST00000452660 CELA2BP08218 269 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-209ENST00000452660 PRICKLE2Q7Z3G6 844 aa5.88□□□□□ -1.47
LRCH3-209ENST00000452660 WHAMMQ8TF30 809 aa5.88□□□□□ -1.47
LRCH3-209ENST00000452660 TRERF1Q96PN7 1200 aa5.88□□□□□ -1.47
LRCH3-209ENST00000452660 NSFL1CQ9UNZ2 370 aaKnown RBP5.88□□□□□ -1.47
LRCH3-209ENST00000452660 PHF20L1A8MW92 1017 aa5.87□□□□□ -1.47
LRCH3-209ENST00000452660 GPR37L1O60883 481 aa5.87□□□□□ -1.47
LRCH3-209ENST00000452660 NEUROD2Q15784 382 aa5.87□□□□□ -1.47
LRCH3-209ENST00000452660 SLC27A3Q5K4L6 730 aa5.87□□□□□ -1.47
LRCH3-209ENST00000452660 NBPF10Q6P3W6 841 aaKnown RBP5.87□□□□□ -1.47
LRCH3-209ENST00000452660 LYPD4Q6UWN0 246 aa5.87□□□□□ -1.47
LRCH3-209ENST00000452660 NBPF15Q8N660 670 aa5.87□□□□□ -1.47
LRCH3-209ENST00000452660 CFHR5Q9BXR6 569 aa5.87□□□□□ -1.47
LRCH3-209ENST00000452660 ESF1Q9H501 851 aaKnown RBP5.87□□□□□ -1.47
LRCH3-209ENST00000452660 CUEDC1Q9NWM3 386 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-209ENST00000452660 MEN1O00255 615 aa5.86□□□□□ -1.47
LRCH3-209ENST00000452660 F11P03951 625 aa5.86□□□□□ -1.47
LRCH3-209ENST00000452660 SUZ12Q15022 739 aaKnown RBP5.86□□□□□ -1.47
LRCH3-209ENST00000452660 DBN1Q16643 649 aa5.86□□□□□ -1.47
LRCH3-209ENST00000452660 TAS1R3Q7RTX0 852 aa5.86□□□□□ -1.47
LRCH3-209ENST00000452660 ESYT1Q9BSJ8 1104 aa5.86□□□□□ -1.47
LRCH3-209ENST00000452660 OSBPL3Q9H4L5 887 aa5.86□□□□□ -1.47
LRCH3-209ENST00000452660 PRM3Q9NNZ6 103 aa5.86□□□□□ -1.47
LRCH3-209ENST00000452660 IGF1RP08069 1367 aa5.85□□□□□ -1.47
LRCH3-209ENST00000452660 WASLO00401 505 aaPredicted RBP5.85□□□□□ -1.47
LRCH3-209ENST00000452660 BCRP11274 1271 aa5.85□□□□□ -1.47
LRCH3-209ENST00000452660 ALYREFQ86V81 257 aaKnown RBP5.85□□□□□ -1.47
LRCH3-209ENST00000452660 MTMR14Q8NCE2 650 aa5.85□□□□□ -1.47
LRCH3-209ENST00000452660 PCDHB11Q9Y5F2 797 aa5.85□□□□□ -1.47
LRCH3-209ENST00000452660 HRH3Q9Y5N1 445 aa5.85□□□□□ -1.47
LRCH3-209ENST00000452660 MYCP01106 439 aaPredicted RBP5.84□□□□□ -1.47
LRCH3-209ENST00000452660 RHOQP17081 205 aa5.84□□□□□ -1.47
LRCH3-209ENST00000452660 IRS1P35568 1242 aa5.84□□□□□ -1.47
LRCH3-209ENST00000452660 MAP2K3P46734 347 aa5.84□□□□□ -1.47
LRCH3-209ENST00000452660 POU4F2Q12837 409 aa5.84□□□□□ -1.47
LRCH3-209ENST00000452660 ESCO1Q5FWF5 840 aa5.84□□□□□ -1.47
LRCH3-209ENST00000452660 BEND7Q8N7W2 519 aaPredicted RBP5.84□□□□□ -1.47
LRCH3-209ENST00000452660 IL27Q8NEV9 243 aa5.84□□□□□ -1.47
LRCH3-209ENST00000452660 XAGE2Q96GT9 111 aa5.84□□□□□ -1.47
LRCH3-209ENST00000452660 TIMMDC1Q9NPL8 285 aa5.84□□□□□ -1.47
LRCH3-209ENST00000452660 PHF24Q9UPV7 400 aa5.84□□□□□ -1.47
LRCH3-209ENST00000452660 A0A1B0GTH6 734 aa5.83□□□□□ -1.48
LRCH3-209ENST00000452660 SCTRP47872 440 aa5.83□□□□□ -1.48
LRCH3-209ENST00000452660 BRPF1P55201 1214 aaPredicted RBP5.83□□□□□ -1.48
LRCH3-209ENST00000452660 RIPOR1Q6ZS17 1223 aa5.83□□□□□ -1.48
LRCH3-209ENST00000452660 PODNQ7Z5L7 613 aa5.83□□□□□ -1.48
LRCH3-209ENST00000452660 NUCKS1Q9H1E3 243 aaKnown RBP5.83□□□□□ -1.48
LRCH3-209ENST00000452660 CEP126Q9P2H0 1117 aa5.83□□□□□ -1.48
LRCH3-209ENST00000452660 CHIC2Q9UKJ5 165 aa5.83□□□□□ -1.48
LRCH3-209ENST00000452660 SLC24A1O60721 1099 aa5.82□□□□□ -1.48
LRCH3-209ENST00000452660 MX2P20592 715 aa5.82□□□□□ -1.48
LRCH3-209ENST00000452660 EIF4G2P78344 907 aaKnown RBP eCLIP5.82□□□□□ -1.48
LRCH3-209ENST00000452660 CNKSR1Q969H4 720 aa5.82□□□□□ -1.48
LRCH3-209ENST00000452660 GTPBP3Q969Y2 492 aaKnown RBP5.82□□□□□ -1.48
LRCH3-209ENST00000452660 SIRT1Q96EB6 747 aa5.82□□□□□ -1.48
LRCH3-209ENST00000452660 ARHGEF10LQ9HCE6 1279 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms