RNA–Protein interactions for RNA: ENST00000452264.1

SMIM1-202, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

TSL 2

Gene SMIM1, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-202ENST00000452264 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.9■■□□□ 1.26
SMIM1-202ENST00000452264 CCER1Q8TC90 406 aaPredicted RBP22.9■■□□□ 1.26
SMIM1-202ENST00000452264 ANKRD36BQ8N2N9 1353 aa22.89■■□□□ 1.26
SMIM1-202ENST00000452264 CCNL1Q9UK58 526 aaPredicted RBP22.89■■□□□ 1.25
SMIM1-202ENST00000452264 CD2APQ9Y5K6 639 aa22.89■■□□□ 1.25
SMIM1-202ENST00000452264 NSD2O96028 1365 aa22.89■■□□□ 1.25
SMIM1-202ENST00000452264 NME9Q86XW9 330 aa22.87■■□□□ 1.25
SMIM1-202ENST00000452264 FAM208AQ9UK61 1670 aaKnown RBP22.85■■□□□ 1.25
SMIM1-202ENST00000452264 KIF3CO14782 793 aa22.83■■□□□ 1.25
SMIM1-202ENST00000452264 SBNO2Q9Y2G9 1366 aa22.82■■□□□ 1.24
SMIM1-202ENST00000452264 LTV1Q96GA3 475 aaPredicted RBP22.81■■□□□ 1.24
SMIM1-202ENST00000452264 C5P01031 1676 aa22.81■■□□□ 1.24
SMIM1-202ENST00000452264 USP47Q96K76 1375 aa22.8■■□□□ 1.24
SMIM1-202ENST00000452264 APLP1P51693 650 aa22.8■■□□□ 1.24
SMIM1-202ENST00000452264 CD163L1Q9NR16 1453 aa22.79■■□□□ 1.24
SMIM1-202ENST00000452264 IP6K1Q92551 441 aa22.79■■□□□ 1.24
SMIM1-202ENST00000452264 IGSF1Q8N6C5 1336 aa22.78■■□□□ 1.24
SMIM1-202ENST00000452264 TAF1LQ8IZX4 1826 aa22.78■■□□□ 1.24
SMIM1-202ENST00000452264 RGPD2P0DJD1 1756 aa22.77■■□□□ 1.24
SMIM1-202ENST00000452264 ZCRB1Q8TBF4 217 aaKnown RBP22.77■■□□□ 1.24
SMIM1-202ENST00000452264 WWC3Q9ULE0 1092 aa22.77■■□□□ 1.24
SMIM1-202ENST00000452264 DNAJC5GQ8N7S2 189 aa22.76■■□□□ 1.23
SMIM1-202ENST00000452264 FLAD1Q8NFF5 587 aa22.76■■□□□ 1.23
SMIM1-202ENST00000452264 MEGF6O75095 1541 aa22.74■■□□□ 1.23
SMIM1-202ENST00000452264 L3MBTL2Q969R5 705 aa22.73■■□□□ 1.23
SMIM1-202ENST00000452264 CLSPNQ9HAW4 1339 aa22.73■■□□□ 1.23
SMIM1-202ENST00000452264 ROCK2O75116 1388 aaKnown RBP22.73■■□□□ 1.23
SMIM1-202ENST00000452264 EDC4Q6P2E9 1401 aaKnown RBP22.73■■□□□ 1.23
SMIM1-202ENST00000452264 HDGFL2Q7Z4V5 671 aaPredicted RBP22.72■■□□□ 1.23
SMIM1-202ENST00000452264 TMC1Q8TDI8 760 aa22.72■■□□□ 1.23
SMIM1-202ENST00000452264 HMGB2P26583 209 aaKnown RBP22.7■■□□□ 1.22
SMIM1-202ENST00000452264 CICQ96RK0 1608 aaPredicted RBP22.7■■□□□ 1.22
SMIM1-202ENST00000452264 TOGARAM1Q9Y4F4 1720 aa22.69■■□□□ 1.22
SMIM1-202ENST00000452264 TOMM70O94826 608 aa22.69■■□□□ 1.22
SMIM1-202ENST00000452264 UBR3Q6ZT12 1888 aa22.68■■□□□ 1.22
SMIM1-202ENST00000452264 C4BP0C0L5 1744 aa22.68■■□□□ 1.22
SMIM1-202ENST00000452264 SLC12A5Q9H2X9 1139 aa22.68■■□□□ 1.22
SMIM1-202ENST00000452264 PALLDQ8WX93 1383 aa22.67■■□□□ 1.22
SMIM1-202ENST00000452264 HOXC9P31274 260 aa22.67■■□□□ 1.22
SMIM1-202ENST00000452264 AMIGO3Q86WK7 504 aa22.67■■□□□ 1.22
SMIM1-202ENST00000452264 WDR90Q96KV7 1748 aa22.67■■□□□ 1.22
SMIM1-202ENST00000452264 MAP3K19Q56UN5 1328 aa22.66■■□□□ 1.22
SMIM1-202ENST00000452264 AK7Q96M32 723 aa22.66■■□□□ 1.22
SMIM1-202ENST00000452264 A0A1W2PP64 1363 aa22.65■■□□□ 1.22
SMIM1-202ENST00000452264 AMPHP49418 695 aa22.64■■□□□ 1.21
SMIM1-202ENST00000452264 COL13A1Q5TAT6 717 aaPredicted RBP22.64■■□□□ 1.21
SMIM1-202ENST00000452264 TERF2IPQ9NYB0 399 aa22.64■■□□□ 1.21
SMIM1-202ENST00000452264 CGNL1Q0VF96 1302 aa22.63■■□□□ 1.21
SMIM1-202ENST00000452264 CAPN15O75808 1086 aa22.63■■□□□ 1.21
SMIM1-202ENST00000452264 PHF14O94880 888 aa22.63■■□□□ 1.21
SMIM1-202ENST00000452264 SMIM5Q71RC9 77 aa22.63■■□□□ 1.21
SMIM1-202ENST00000452264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.62■■□□□ 1.21
SMIM1-202ENST00000452264 FBLN1P23142 703 aa22.62■■□□□ 1.21
SMIM1-202ENST00000452264 MPRIPQ6WCQ1 1025 aa22.62■■□□□ 1.21
SMIM1-202ENST00000452264 PCNTO95613 3336 aa22.62■■□□□ 1.21
SMIM1-202ENST00000452264 ITGB4P16144 1822 aa22.61■■□□□ 1.21
SMIM1-202ENST00000452264 NBPF6Q5VWK0 638 aa22.61■■□□□ 1.21
SMIM1-202ENST00000452264 USHBP1Q8N6Y0 703 aa22.61■■□□□ 1.21
SMIM1-202ENST00000452264 NBPF4Q96M43 638 aa22.61■■□□□ 1.21
SMIM1-202ENST00000452264 NSD3Q9BZ95 1437 aa22.61■■□□□ 1.21
SMIM1-202ENST00000452264 NEUROD1Q13562 356 aa22.6■■□□□ 1.21
SMIM1-202ENST00000452264 RAPGEF4Q8WZA2 1011 aa22.6■■□□□ 1.21
SMIM1-202ENST00000452264 KLRG1Q96E93 195 aa22.6■■□□□ 1.21
SMIM1-202ENST00000452264 SIN3AQ96ST3 1273 aa22.6■■□□□ 1.21
SMIM1-202ENST00000452264 NMRK2Q9NPI5 230 aa22.6■■□□□ 1.21
SMIM1-202ENST00000452264 COG3Q96JB2 828 aa22.59■■□□□ 1.21
SMIM1-202ENST00000452264 N4BP2Q86UW6 1770 aaPredicted RBP22.58■■□□□ 1.21
SMIM1-202ENST00000452264 KIAA1551Q9HCM1 1747 aa22.58■■□□□ 1.21
SMIM1-202ENST00000452264 SSFA2P28290 1259 aa22.58■■□□□ 1.21
SMIM1-202ENST00000452264 HTRA3P83110 453 aa22.58■■□□□ 1.21
SMIM1-202ENST00000452264 JMYQ8N9B5 988 aa22.58■■□□□ 1.21
SMIM1-202ENST00000452264 SMARCC1Q92922 1105 aaPredicted RBP22.58■■□□□ 1.21
SMIM1-202ENST00000452264 KIF13BQ9NQT8 1826 aa22.58■■□□□ 1.21
SMIM1-202ENST00000452264 PCDH11XQ9BZA7 1347 aa22.57■■□□□ 1.2
SMIM1-202ENST00000452264 PCDH11YQ9BZA8 1340 aa22.57■■□□□ 1.2
SMIM1-202ENST00000452264 TATP17735 454 aaPredicted RBP22.57■■□□□ 1.2
SMIM1-202ENST00000452264 RBM46Q8TBY0 533 aaKnown RBP22.57■■□□□ 1.2
SMIM1-202ENST00000452264 PXDNLA1KZ92 1463 aa22.57■■□□□ 1.2
SMIM1-202ENST00000452264 RTL1A6NKG5 1358 aa22.56■■□□□ 1.2
SMIM1-202ENST00000452264 MAP2P11137 1827 aaKnown RBP22.56■■□□□ 1.2
SMIM1-202ENST00000452264 TNS4Q8IZW8 715 aa22.55■■□□□ 1.2
SMIM1-202ENST00000452264 BCS1LQ9Y276 419 aa22.55■■□□□ 1.2
SMIM1-202ENST00000452264 PRELPP51888 382 aa22.54■■□□□ 1.2
SMIM1-202ENST00000452264 ARHGAP27Q6ZUM4 889 aa22.53■■□□□ 1.2
SMIM1-202ENST00000452264 LINC00116Q8NCU8 138 aa22.53■■□□□ 1.2
SMIM1-202ENST00000452264 SMG6Q86US8 1419 aaKnown RBP22.52■■□□□ 1.2
SMIM1-202ENST00000452264 CYP27B1O15528 508 aa22.52■■□□□ 1.2
SMIM1-202ENST00000452264 MMP10P09238 476 aa22.52■■□□□ 1.2
SMIM1-202ENST00000452264 ZEB1P37275 1124 aaPredicted RBP22.52■■□□□ 1.2
SMIM1-202ENST00000452264 RRS1Q15050 365 aaKnown RBP22.52■■□□□ 1.2
SMIM1-202ENST00000452264 TGFB2P61812 414 aa22.51■■□□□ 1.19
SMIM1-202ENST00000452264 C16orf71Q8IYS4 520 aaPredicted RBP22.51■■□□□ 1.19
SMIM1-202ENST00000452264 PIGBQ92521 554 aa22.51■■□□□ 1.19
SMIM1-202ENST00000452264 A0A0G2JLW4 131 aa22.5■■□□□ 1.19
SMIM1-202ENST00000452264 PUS7Q96PZ0 661 aaKnown RBP22.5■■□□□ 1.19
SMIM1-202ENST00000452264 CARD11Q9BXL7 1154 aa22.5■■□□□ 1.19
SMIM1-202ENST00000452264 TONSLQ96HA7 1378 aa22.5■■□□□ 1.19
SMIM1-202ENST00000452264 BRCA1P38398 1863 aaKnown RBP22.49■■□□□ 1.19
SMIM1-202ENST00000452264 LOC102724428A0A0B4J2F2 783 aa22.49■■□□□ 1.19
SMIM1-202ENST00000452264 GNPATO15228 680 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms