RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 HAP1P54257 671 aaPredicted RBP27.6■■■□□ 2.01
TTC3-210ENST00000450533 RBM42Q9BTD8 480 aaKnown RBP27.6■■■□□ 2.01
TTC3-210ENST00000450533 EID1Q9Y6B2 187 aa27.6■■■□□ 2.01
TTC3-210ENST00000450533 APBB1O00213 710 aa27.59■■■□□ 2.01
TTC3-210ENST00000450533 HSP90AB1P08238 724 aaKnown RBP27.59■■■□□ 2.01
TTC3-210ENST00000450533 MTHFSDQ2M296 383 aaKnown RBP27.59■■■□□ 2.01
TTC3-210ENST00000450533 SLC4A2P04920 1241 aa27.59■■■□□ 2.01
TTC3-210ENST00000450533 ANKRD44Q8N8A2 993 aa27.59■■■□□ 2.01
TTC3-210ENST00000450533 KIAA0232Q92628 1395 aa27.59■■■□□ 2.01
TTC3-210ENST00000450533 NALCNQ8IZF0 1738 aa27.58■■■□□ 2.01
TTC3-210ENST00000450533 CRB1P82279 1406 aa27.58■■■□□ 2.01
TTC3-210ENST00000450533 ATP10DQ9P241 1426 aa27.58■■■□□ 2.01
TTC3-210ENST00000450533 NCOA3Q9Y6Q9 1424 aa27.58■■■□□ 2.01
TTC3-210ENST00000450533 CDC45O75419 566 aa27.58■■■□□ 2.01
TTC3-210ENST00000450533 MEIS3Q99687 375 aa27.58■■■□□ 2.01
TTC3-210ENST00000450533 SSH2Q76I76 1423 aa27.58■■■□□ 2.01
TTC3-210ENST00000450533 NGDNQ8NEJ9 315 aaKnown RBP27.58■■■□□ 2.01
TTC3-210ENST00000450533 RGPD1P0DJD0 1748 aa27.57■■■□□ 2
TTC3-210ENST00000450533 CEP85Q6P2H3 762 aa27.57■■■□□ 2
TTC3-210ENST00000450533 OTUD7AQ8TE49 926 aaPredicted RBP27.57■■■□□ 2
TTC3-210ENST00000450533 FOXD4L1Q9NU39 408 aa27.57■■■□□ 2
TTC3-210ENST00000450533 DDIT3P35638 169 aa27.56■■■□□ 2
TTC3-210ENST00000450533 RIMS1Q86UR5 1692 aaKnown RBP27.56■■■□□ 2
TTC3-210ENST00000450533 RTF1Q92541 710 aaKnown RBP27.55■■■□□ 2
TTC3-210ENST00000450533 TSPYL4Q9UJ04 414 aa27.55■■■□□ 2
TTC3-210ENST00000450533 SMARCA5O60264 1052 aaPredicted RBP27.55■■■□□ 2
TTC3-210ENST00000450533 RTL1A6NKG5 1358 aa27.54■■■□□ 2
TTC3-210ENST00000450533 PTPRCP08575 1304 aa27.54■■■□□ 2
TTC3-210ENST00000450533 ARHGEF10O15013 1369 aa27.54■■■□□ 2
TTC3-210ENST00000450533 AMPHP49418 695 aa27.53■■■□□ 2
TTC3-210ENST00000450533 G2E3Q7L622 706 aa27.53■■■□□ 2
TTC3-210ENST00000450533 RPAP2Q8IXW5 612 aaPredicted RBP27.53■■■□□ 2
TTC3-210ENST00000450533 TRAK2O60296 914 aa27.53■■■□□ 2
TTC3-210ENST00000450533 TTC22Q5TAA0 569 aa27.53■■■□□ 2
TTC3-210ENST00000450533 TTC21AQ8NDW8 1320 aa27.53■■■□□ 2
TTC3-210ENST00000450533 F6X3S4 739 aa27.52■■■□□ 2
TTC3-210ENST00000450533 SLC4A10Q6U841 1118 aa27.52■■■□□ 2
TTC3-210ENST00000450533 FLT4P35916 1363 aa27.52■■■□□ 2
TTC3-210ENST00000450533 EYA1Q99502 592 aa27.52■■■□□ 2
TTC3-210ENST00000450533 HSP90AA1P07900 732 aaKnown RBP27.51■■■□□ 2
TTC3-210ENST00000450533 SBNO1A3KN83 1393 aa27.51■■□□□ 1.99
TTC3-210ENST00000450533 NUTM2GQ5VZR2 741 aa27.5■■□□□ 1.99
TTC3-210ENST00000450533 RGPD8O14715 1765 aaPredicted RBP27.49■■□□□ 1.99
TTC3-210ENST00000450533 TNPO1Q92973 898 aaKnown RBP27.49■■□□□ 1.99
TTC3-210ENST00000450533 K7ELQ4 463 aaPredicted RBP27.48■■□□□ 1.99
TTC3-210ENST00000450533 CEP170BQ9Y4F5 1589 aaPredicted RBP27.48■■□□□ 1.99
TTC3-210ENST00000450533 L1TD1Q5T7N2 865 aaKnown RBP27.48■■□□□ 1.99
TTC3-210ENST00000450533 NLRP6P59044 892 aa27.47■■□□□ 1.99
TTC3-210ENST00000450533 TBX22Q9Y458 520 aa27.47■■□□□ 1.99
TTC3-210ENST00000450533 FMN2Q9NZ56 1722 aa27.47■■□□□ 1.99
TTC3-210ENST00000450533 IGSF1Q8N6C5 1336 aa27.46■■□□□ 1.99
TTC3-210ENST00000450533 KDRP35968 1356 aa27.46■■□□□ 1.99
TTC3-210ENST00000450533 DIP2AQ14689 1571 aa27.45■■□□□ 1.99
TTC3-210ENST00000450533 DDX11L8A8MPP1 907 aa27.45■■□□□ 1.99
TTC3-210ENST00000450533 GOLGA6L3A6NEY3 463 aa27.45■■□□□ 1.98
TTC3-210ENST00000450533 SDSP20132 328 aa27.45■■□□□ 1.98
TTC3-210ENST00000450533 NECTIN2Q92692 538 aa27.44■■□□□ 1.98
TTC3-210ENST00000450533 GAS2L2Q8NHY3 880 aa27.43■■□□□ 1.98
TTC3-210ENST00000450533 CIZ1Q9ULV3 898 aaPredicted RBP27.43■■□□□ 1.98
TTC3-210ENST00000450533 RAB3GAP1Q15042 981 aa27.42■■□□□ 1.98
TTC3-210ENST00000450533 PIK3C2AO00443 1686 aa27.42■■□□□ 1.98
TTC3-210ENST00000450533 XRCC6P12956 609 aaKnown RBP eCLIP27.41■■□□□ 1.983e-6■■□□□ 14.4
TTC3-210ENST00000450533 LTV1Q96GA3 475 aaPredicted RBP27.41■■□□□ 1.98
TTC3-210ENST00000450533 FSD2A1L4K1 749 aa27.41■■□□□ 1.98
TTC3-210ENST00000450533 SLIT1O75093 1534 aa27.41■■□□□ 1.98
TTC3-210ENST00000450533 ARHGAP23Q9P227 1491 aa27.4■■□□□ 1.98
TTC3-210ENST00000450533 USP26Q9BXU7 913 aa27.4■■□□□ 1.98
TTC3-210ENST00000450533 STK31Q9BXU1 1019 aa27.4■■□□□ 1.98
TTC3-210ENST00000450533 CCT4P50991 539 aaKnown RBP27.39■■□□□ 1.98
TTC3-210ENST00000450533 HMMRO75330 724 aa27.39■■□□□ 1.97
TTC3-210ENST00000450533 KCNA6P17658 529 aa27.38■■□□□ 1.97
TTC3-210ENST00000450533 HOXC9P31274 260 aa27.38■■□□□ 1.97
TTC3-210ENST00000450533 THEMISQ8N1K5 641 aaPredicted RBP27.38■■□□□ 1.97
TTC3-210ENST00000450533 GBP4Q96PP9 640 aa27.38■■□□□ 1.97
TTC3-210ENST00000450533 PANK2Q9BZ23 570 aa27.37■■□□□ 1.97
TTC3-210ENST00000450533 GNAT3A8MTJ3 354 aa27.36■■□□□ 1.97
TTC3-210ENST00000450533 FKBP5Q13451 457 aaPredicted RBP27.36■■□□□ 1.97
TTC3-210ENST00000450533 EXOC6BQ9Y2D4 811 aa27.36■■□□□ 1.97
TTC3-210ENST00000450533 FLIIQ13045 1269 aa27.35■■□□□ 1.97
TTC3-210ENST00000450533 RABEP1Q15276 862 aa27.35■■□□□ 1.97
TTC3-210ENST00000450533 ABTB2Q8N961 1025 aa27.35■■□□□ 1.97
TTC3-210ENST00000450533 SSFA2P28290 1259 aa27.35■■□□□ 1.97
TTC3-210ENST00000450533 C14orf37Q86TY3 774 aa27.35■■□□□ 1.97
TTC3-210ENST00000450533 GNAI2P04899 355 aa27.34■■□□□ 1.97
TTC3-210ENST00000450533 CASC1Q6TDU7 716 aa27.34■■□□□ 1.97
TTC3-210ENST00000450533 TSHZ3Q63HK5 1081 aa27.34■■□□□ 1.97
TTC3-210ENST00000450533 USHBP1Q8N6Y0 703 aa27.33■■□□□ 1.97
TTC3-210ENST00000450533 IL17REQ8NFR9 667 aa27.33■■□□□ 1.97
TTC3-210ENST00000450533 CCDC30Q5VVM6 783 aa27.32■■□□□ 1.96
TTC3-210ENST00000450533 FAM43AQ8N2R8 423 aa27.32■■□□□ 1.96
TTC3-210ENST00000450533 EIF5BO60841 1220 aaKnown RBP27.32■■□□□ 1.96
TTC3-210ENST00000450533 PDE1AP54750 535 aa27.31■■□□□ 1.96
TTC3-210ENST00000450533 HTATSF1O43719 755 aaKnown RBP27.31■■□□□ 1.96
TTC3-210ENST00000450533 ANO8Q9HCE9 1232 aaPredicted RBP27.3■■□□□ 1.96
TTC3-210ENST00000450533 PNMA6EA0A0J9YXQ4 647 aa27.29■■□□□ 1.96
TTC3-210ENST00000450533 RBM33Q96EV2 1170 aaKnown RBP27.28■■□□□ 1.96
TTC3-210ENST00000450533 MAP3K5Q99683 1374 aa27.28■■□□□ 1.96
TTC3-210ENST00000450533 NWD1Q149M9 1564 aa27.27■■□□□ 1.96
TTC3-210ENST00000450533 AK9Q5TCS8 1911 aa27.27■■□□□ 1.96
TTC3-210ENST00000450533 XRN1Q8IZH2 1706 aaKnown RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms