RNA–Protein interactions for RNA: ENST00000450338.5

SEMA3F-207, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 1,693 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-207ENST00000450338 MYH16Q9H6N6 1097 aa29■■■□□ 2.23
SEMA3F-207ENST00000450338 LARP1Q6PKG0 1096 aaKnown RBP28.99■■■□□ 2.23
SEMA3F-207ENST00000450338 TATP17735 454 aaPredicted RBP28.99■■■□□ 2.23
SEMA3F-207ENST00000450338 RTF1Q92541 710 aaKnown RBP28.99■■■□□ 2.23
SEMA3F-207ENST00000450338 THUMPD2Q9BTF0 503 aaKnown RBP28.99■■■□□ 2.23
SEMA3F-207ENST00000450338 HTATSF1O43719 755 aaKnown RBP28.98■■■□□ 2.23
SEMA3F-207ENST00000450338 SPATA31A6Q5VVP1 1343 aa28.98■■■□□ 2.23
SEMA3F-207ENST00000450338 PLEKHG2Q9H7P9 1386 aa28.97■■■□□ 2.23
SEMA3F-207ENST00000450338 GNAT3A8MTJ3 354 aa28.97■■■□□ 2.23
SEMA3F-207ENST00000450338 DCTN1Q14203 1278 aa28.97■■■□□ 2.23
SEMA3F-207ENST00000450338 MAP3K5Q99683 1374 aa28.97■■■□□ 2.23
SEMA3F-207ENST00000450338 CRB1P82279 1406 aa28.97■■■□□ 2.23
SEMA3F-207ENST00000450338 MEGF6O75095 1541 aa28.96■■■□□ 2.23
SEMA3F-207ENST00000450338 NWD2Q9ULI1 1742 aa28.95■■■□□ 2.23
SEMA3F-207ENST00000450338 MCM10Q7L590 875 aa28.95■■■□□ 2.22
SEMA3F-207ENST00000450338 NRAPQ86VF7 1730 aa28.94■■■□□ 2.22
SEMA3F-207ENST00000450338 PARP4Q9UKK3 1724 aaKnown RBP28.94■■■□□ 2.22
SEMA3F-207ENST00000450338 ZNF530Q6P9A1 599 aaPredicted RBP28.94■■■□□ 2.22
SEMA3F-207ENST00000450338 SUPT16HQ9Y5B9 1047 aaKnown RBP28.94■■■□□ 2.22
SEMA3F-207ENST00000450338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.93■■■□□ 2.22
SEMA3F-207ENST00000450338 IFT57Q9NWB7 429 aa28.93■■■□□ 2.22
SEMA3F-207ENST00000450338 GNAI1P63096 354 aa28.92■■■□□ 2.22
SEMA3F-207ENST00000450338 AKAP4Q5JQC9 854 aa28.92■■■□□ 2.22
SEMA3F-207ENST00000450338 RCAN3Q9UKA8 241 aa28.92■■■□□ 2.22
SEMA3F-207ENST00000450338 PKD1L3Q7Z443 1732 aa28.91■■■□□ 2.22
SEMA3F-207ENST00000450338 FANCIQ9NVI1 1328 aa28.91■■■□□ 2.22
SEMA3F-207ENST00000450338 SPG7Q9UQ90 795 aa28.91■■■□□ 2.22
SEMA3F-207ENST00000450338 C1orf141Q5JVX7 400 aa28.9■■■□□ 2.22
SEMA3F-207ENST00000450338 LAS1LQ9Y4W2 734 aaKnown RBP28.9■■■□□ 2.22
SEMA3F-207ENST00000450338 SLIT2O94813 1529 aa28.9■■■□□ 2.22
SEMA3F-207ENST00000450338 ZNF853P0CG23 659 aa28.89■■■□□ 2.22
SEMA3F-207ENST00000450338 TSR2Q969E8 191 aaKnown RBP28.89■■■□□ 2.22
SEMA3F-207ENST00000450338 CFAP44Q96MT7 982 aa28.89■■■□□ 2.22
SEMA3F-207ENST00000450338 OVOS2A0A0G2JMS6 1433 aa28.89■■■□□ 2.22
SEMA3F-207ENST00000450338 LRRC37A3O60309 1634 aa28.89■■■□□ 2.22
SEMA3F-207ENST00000450338 VIRMAQ69YN4 1812 aaKnown RBP28.89■■■□□ 2.21
SEMA3F-207ENST00000450338 LRP6O75581 1613 aa28.88■■■□□ 2.21
SEMA3F-207ENST00000450338 IL2RBP14784 551 aa28.87■■■□□ 2.21
SEMA3F-207ENST00000450338 IL17REQ8NFR9 667 aa28.86■■■□□ 2.21
SEMA3F-207ENST00000450338 USP35Q9P2H5 1018 aa28.86■■■□□ 2.21
SEMA3F-207ENST00000450338 NGLY1Q96IV0 654 aa28.85■■■□□ 2.21
SEMA3F-207ENST00000450338 C8orf37Q96NL8 207 aa28.85■■■□□ 2.21
SEMA3F-207ENST00000450338 MBIPQ9NS73 344 aa28.83■■■□□ 2.21
SEMA3F-207ENST00000450338 CEMIPQ8WUJ3 1361 aa28.83■■■□□ 2.21
SEMA3F-207ENST00000450338 CHL1O00533 1208 aa28.82■■■□□ 2.2
SEMA3F-207ENST00000450338 EXOSC9Q06265 439 aaKnown RBP28.82■■■□□ 2.2
SEMA3F-207ENST00000450338 IFNL2Q8IZJ0 200 aa28.82■■■□□ 2.2
SEMA3F-207ENST00000450338 ZCRB1Q8TBF4 217 aaKnown RBP28.82■■■□□ 2.2
SEMA3F-207ENST00000450338 PHKG2P15735 406 aa28.81■■■□□ 2.2
SEMA3F-207ENST00000450338 MPRIPQ6WCQ1 1025 aa28.81■■■□□ 2.2
SEMA3F-207ENST00000450338 GTF3C3Q9Y5Q9 886 aa28.81■■■□□ 2.2
SEMA3F-207ENST00000450338 WNK3Q9BYP7 1800 aa28.81■■■□□ 2.2
SEMA3F-207ENST00000450338 UNC5CLQ8IV45 518 aa28.8■■■□□ 2.2
SEMA3F-207ENST00000450338 LGR6Q9HBX8 967 aa28.8■■■□□ 2.2
SEMA3F-207ENST00000450338 ADAMTS7Q9UKP4 1686 aa28.8■■■□□ 2.2
SEMA3F-207ENST00000450338 RNMTO43148 476 aaKnown RBP28.8■■■□□ 2.2
SEMA3F-207ENST00000450338 CT47B1P0C2W7 299 aaPredicted RBP28.8■■■□□ 2.2
SEMA3F-207ENST00000450338 RNF123Q5XPI4 1314 aa28.79■■■□□ 2.2
SEMA3F-207ENST00000450338 FNBP4Q8N3X1 1017 aaPredicted RBP28.79■■■□□ 2.2
SEMA3F-207ENST00000450338 SCN11AQ9UI33 1791 aa28.79■■■□□ 2.2
SEMA3F-207ENST00000450338 SPATA31A1Q5TZJ5 1347 aa28.79■■■□□ 2.2
SEMA3F-207ENST00000450338 DISP2A7MBM2 1401 aa28.78■■■□□ 2.2
SEMA3F-207ENST00000450338 CYP27B1O15528 508 aa28.78■■■□□ 2.2
SEMA3F-207ENST00000450338 NEFLP07196 543 aa28.78■■■□□ 2.2
SEMA3F-207ENST00000450338 MEX3CQ5U5Q3 659 aaKnown RBP28.78■■■□□ 2.2
SEMA3F-207ENST00000450338 PCDH11XQ9BZA7 1347 aa28.78■■■□□ 2.2
SEMA3F-207ENST00000450338 PCDH11YQ9BZA8 1340 aa28.78■■■□□ 2.2
SEMA3F-207ENST00000450338 TAF7Q15545 349 aaPredicted RBP28.77■■■□□ 2.2
SEMA3F-207ENST00000450338 THRAP3Q9Y2W1 955 aaKnown RBP28.77■■■□□ 2.2
SEMA3F-207ENST00000450338 SHANK3Q9BYB0 1731 aa28.77■■■□□ 2.2
SEMA3F-207ENST00000450338 SPATA31A5Q5VU36 1347 aa28.77■■■□□ 2.2
SEMA3F-207ENST00000450338 SPATA31A7Q8IWB4 1347 aa28.77■■■□□ 2.2
SEMA3F-207ENST00000450338 BCL9LQ86UU0 1499 aa28.77■■■□□ 2.2
SEMA3F-207ENST00000450338 BABAM1Q9NWV8 329 aa28.76■■■□□ 2.19
SEMA3F-207ENST00000450338 TSPYL4Q9UJ04 414 aa28.76■■■□□ 2.19
SEMA3F-207ENST00000450338 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.76■■■□□ 2.19
SEMA3F-207ENST00000450338 HSP90AB1P08238 724 aaKnown RBP28.75■■■□□ 2.19
SEMA3F-207ENST00000450338 TEFQ10587 303 aa28.75■■■□□ 2.19
SEMA3F-207ENST00000450338 CCDC9Q9Y3X0 531 aaKnown RBP28.75■■■□□ 2.19
SEMA3F-207ENST00000450338 MIS18AQ9NYP9 233 aa28.74■■■□□ 2.19
SEMA3F-207ENST00000450338 KDM6AO15550 1401 aaPredicted RBP28.73■■■□□ 2.19
SEMA3F-207ENST00000450338 CDCA7Q9BWT1 371 aaPredicted RBP28.73■■■□□ 2.19
SEMA3F-207ENST00000450338 SIPA1L3O60292 1781 aaPredicted RBP28.72■■■□□ 2.19
SEMA3F-207ENST00000450338 RRP1P56182 461 aaKnown RBP28.72■■■□□ 2.19
SEMA3F-207ENST00000450338 VPS72Q15906 364 aa28.72■■■□□ 2.19
SEMA3F-207ENST00000450338 DCAF5Q96JK2 942 aa28.72■■■□□ 2.19
SEMA3F-207ENST00000450338 USP21Q9UK80 565 aa28.72■■■□□ 2.19
SEMA3F-207ENST00000450338 RARSP54136 660 aaKnown RBP28.7■■■□□ 2.19
SEMA3F-207ENST00000450338 DDX54Q8TDD1 881 aaKnown RBP28.69■■■□□ 2.18
SEMA3F-207ENST00000450338 KDM3BQ7LBC6 1761 aa28.69■■■□□ 2.18
SEMA3F-207ENST00000450338 BARGINQ6ZT62 677 aa28.68■■■□□ 2.18
SEMA3F-207ENST00000450338 C8orf58Q8NAV2 365 aa28.68■■■□□ 2.18
SEMA3F-207ENST00000450338 BCAR3O75815 825 aa28.67■■■□□ 2.18
SEMA3F-207ENST00000450338 FKBP8Q14318 412 aa28.67■■■□□ 2.18
SEMA3F-207ENST00000450338 TWISTNBQ3B726 338 aaPredicted RBP28.67■■■□□ 2.18
SEMA3F-207ENST00000450338 TSPYL6Q8N831 410 aa28.67■■■□□ 2.18
SEMA3F-207ENST00000450338 EXOC5O00471 708 aa28.67■■■□□ 2.18
SEMA3F-207ENST00000450338 VAMP4O75379 141 aa28.67■■■□□ 2.18
SEMA3F-207ENST00000450338 NKX1-1Q15270 411 aaPredicted RBP28.67■■■□□ 2.18
SEMA3F-207ENST00000450338 ZNF428Q96B54 188 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms