RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 CEP85Q6P2H3 762 aa13.97□□□□□ -0.17
SYVN1-204ENST00000449943 ANKRD44Q8N8A2 993 aa13.97□□□□□ -0.17
SYVN1-204ENST00000449943 SKOR2Q2VWA4 1001 aaPredicted RBP13.96□□□□□ -0.17
SYVN1-204ENST00000449943 INTS3Q68E01 1043 aaKnown RBP13.96□□□□□ -0.17
SYVN1-204ENST00000449943 DDX49Q9Y6V7 483 aaKnown RBP13.96□□□□□ -0.17
SYVN1-204ENST00000449943 PRKCSHP14314 528 aaPredicted RBP13.96□□□□□ -0.17
SYVN1-204ENST00000449943 SDSP20132 328 aa13.96□□□□□ -0.17
SYVN1-204ENST00000449943 CASC1Q6TDU7 716 aa13.96□□□□□ -0.17
SYVN1-204ENST00000449943 RTF1Q92541 710 aaKnown RBP13.96□□□□□ -0.17
SYVN1-204ENST00000449943 F6X3S4 739 aa13.96□□□□□ -0.18
SYVN1-204ENST00000449943 RABEP1Q15276 862 aa13.96□□□□□ -0.18
SYVN1-204ENST00000449943 MCTP1Q6DN14 999 aa13.95□□□□□ -0.18
SYVN1-204ENST00000449943 FOXO3O43524 673 aa13.95□□□□□ -0.18
SYVN1-204ENST00000449943 BAG4O95429 457 aaKnown RBP13.94□□□□□ -0.18
SYVN1-204ENST00000449943 RPAP2Q8IXW5 612 aaPredicted RBP13.94□□□□□ -0.18
SYVN1-204ENST00000449943 USP26Q9BXU7 913 aa13.94□□□□□ -0.18
SYVN1-204ENST00000449943 RIMBP3CA6NJZ7 1639 aa13.94□□□□□ -0.18
SYVN1-204ENST00000449943 RIMBP3BA6NNM3 1639 aa13.94□□□□□ -0.18
SYVN1-204ENST00000449943 RIMBP3Q9UFD9 1639 aa13.94□□□□□ -0.18
SYVN1-204ENST00000449943 TTC21BQ7Z4L5 1316 aa13.94□□□□□ -0.18
SYVN1-204ENST00000449943 ACEP12821 1306 aa13.93□□□□□ -0.18
SYVN1-204ENST00000449943 CHL1O00533 1208 aa13.93□□□□□ -0.18
SYVN1-204ENST00000449943 TSHZ3Q63HK5 1081 aa13.93□□□□□ -0.18
SYVN1-204ENST00000449943 NECTIN2Q92692 538 aa13.93□□□□□ -0.18
SYVN1-204ENST00000449943 FOXD4L5Q5VV16 416 aaPredicted RBP13.93□□□□□ -0.18
SYVN1-204ENST00000449943 FOXD4L4Q8WXT5 416 aaPredicted RBP13.93□□□□□ -0.18
SYVN1-204ENST00000449943 PTMSP20962 102 aa13.93□□□□□ -0.18
SYVN1-204ENST00000449943 PKP1Q13835 747 aa13.93□□□□□ -0.18
SYVN1-204ENST00000449943 G2E3Q7L622 706 aa13.93□□□□□ -0.18
SYVN1-204ENST00000449943 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
SYVN1-204ENST00000449943 KNDC1Q76NI1 1749 aa13.93□□□□□ -0.18
SYVN1-204ENST00000449943 RTL1A6NKG5 1358 aa13.93□□□□□ -0.18
SYVN1-204ENST00000449943 ATP10DQ9P241 1426 aa13.92□□□□□ -0.18
SYVN1-204ENST00000449943 DLG5Q8TDM6 1919 aa13.92□□□□□ -0.18
SYVN1-204ENST00000449943 TSPOAP1O95153 1857 aa13.92□□□□□ -0.18
SYVN1-204ENST00000449943 A0A0G2JS52 829 aa13.92□□□□□ -0.18
SYVN1-204ENST00000449943 CLCN1P35523 988 aa13.91□□□□□ -0.18
SYVN1-204ENST00000449943 ISY1Q9ULR0 285 aaKnown RBP13.91□□□□□ -0.18
SYVN1-204ENST00000449943 ESPNB1AK53 854 aa13.91□□□□□ -0.18
SYVN1-204ENST00000449943 ZGPATQ8N5A5 531 aaKnown RBP13.91□□□□□ -0.18
SYVN1-204ENST00000449943 KIF24Q5T7B8 1368 aa13.91□□□□□ -0.18
SYVN1-204ENST00000449943 RGS12O14924 1447 aa13.91□□□□□ -0.18
SYVN1-204ENST00000449943 EXOC6BQ9Y2D4 811 aa13.91□□□□□ -0.18
SYVN1-204ENST00000449943 ERBB4Q15303 1308 aa13.91□□□□□ -0.18
SYVN1-204ENST00000449943 ST18O60284 1047 aa13.91□□□□□ -0.18
SYVN1-204ENST00000449943 ROBO2Q9HCK4 1378 aa13.9□□□□□ -0.18
SYVN1-204ENST00000449943 CAVIN1Q6NZI2 390 aaKnown RBP13.9□□□□□ -0.18
SYVN1-204ENST00000449943 NOL8Q76FK4 1167 aaKnown RBP13.9□□□□□ -0.18
SYVN1-204ENST00000449943 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
SYVN1-204ENST00000449943 HMMRO75330 724 aa13.9□□□□□ -0.18
SYVN1-204ENST00000449943 PTPRCP08575 1304 aa13.9□□□□□ -0.18
SYVN1-204ENST00000449943 NASPP49321 788 aaPredicted RBP13.89□□□□□ -0.19
SYVN1-204ENST00000449943 MTHFSDQ2M296 383 aaKnown RBP13.89□□□□□ -0.19
SYVN1-204ENST00000449943 CHAMP1Q96JM3 812 aa13.89□□□□□ -0.19
SYVN1-204ENST00000449943 REC8O95072 547 aa13.89□□□□□ -0.19
SYVN1-204ENST00000449943 NUCB2P80303 420 aa13.89□□□□□ -0.19
SYVN1-204ENST00000449943 ANP32BQ92688 251 aaKnown RBP13.89□□□□□ -0.19
SYVN1-204ENST00000449943 SLC26A8Q96RN1 970 aa13.89□□□□□ -0.19
SYVN1-204ENST00000449943 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
SYVN1-204ENST00000449943 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
SYVN1-204ENST00000449943 SETD1AO15047 1707 aaKnown RBP13.88□□□□□ -0.19
SYVN1-204ENST00000449943 KLHL40Q2TBA0 621 aa13.88□□□□□ -0.19
SYVN1-204ENST00000449943 ERC2O15083 957 aa13.88□□□□□ -0.19
SYVN1-204ENST00000449943 PRPF40AO75400 957 aaKnown RBP13.87□□□□□ -0.19
SYVN1-204ENST00000449943 AMPHP49418 695 aa13.87□□□□□ -0.19
SYVN1-204ENST00000449943 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
SYVN1-204ENST00000449943 NRXN3Q9Y4C0 1643 aa13.87□□□□□ -0.19
SYVN1-204ENST00000449943 KIAA0232Q92628 1395 aa13.87□□□□□ -0.19
SYVN1-204ENST00000449943 PDE1AP54750 535 aa13.87□□□□□ -0.19
SYVN1-204ENST00000449943 FKBP5Q13451 457 aaPredicted RBP13.87□□□□□ -0.19
SYVN1-204ENST00000449943 RILPL2Q969X0 211 aa13.87□□□□□ -0.19
SYVN1-204ENST00000449943 CHMP4AQ9BY43 222 aa13.87□□□□□ -0.19
SYVN1-204ENST00000449943 TRIM6-TRIM34B2RNG4 842 aa13.86□□□□□ -0.19
SYVN1-204ENST00000449943 AK9Q5TCS8 1911 aa13.86□□□□□ -0.19
SYVN1-204ENST00000449943 NEK4P51957 841 aa13.86□□□□□ -0.19
SYVN1-204ENST00000449943 NUTM2GQ5VZR2 741 aa13.86□□□□□ -0.19
SYVN1-204ENST00000449943 REREQ9P2R6 1566 aa13.85□□□□□ -0.19
SYVN1-204ENST00000449943 GNAI2P04899 355 aa13.85□□□□□ -0.19
SYVN1-204ENST00000449943 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
SYVN1-204ENST00000449943 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
SYVN1-204ENST00000449943 MON2Q7Z3U7 1717 aa13.85□□□□□ -0.19
SYVN1-204ENST00000449943 LTV1Q96GA3 475 aaPredicted RBP13.85□□□□□ -0.19
SYVN1-204ENST00000449943 CRB1P82279 1406 aa13.84□□□□□ -0.19
SYVN1-204ENST00000449943 LMBRD1Q9NUN5 540 aa13.84□□□□□ -0.19
SYVN1-204ENST00000449943 C3P01024 1663 aa13.84□□□□□ -0.19
SYVN1-204ENST00000449943 TNRQ92752 1358 aa13.84□□□□□ -0.19
SYVN1-204ENST00000449943 ZSCAN23Q3MJ62 389 aa13.84□□□□□ -0.19
SYVN1-204ENST00000449943 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
SYVN1-204ENST00000449943 ITSN1Q15811 1721 aa13.84□□□□□ -0.19
SYVN1-204ENST00000449943 FOXD4L6Q3SYB3 417 aaPredicted RBP13.83□□□□□ -0.19
SYVN1-204ENST00000449943 FOXD4L3Q6VB84 417 aaPredicted RBP13.83□□□□□ -0.19
SYVN1-204ENST00000449943 AGLP35573 1532 aa13.83□□□□□ -0.19
SYVN1-204ENST00000449943 CCDC173Q0VFZ6 552 aa13.83□□□□□ -0.2
SYVN1-204ENST00000449943 SIRT1Q96EB6 747 aa13.83□□□□□ -0.2
SYVN1-204ENST00000449943 CWC22Q9HCG8 908 aaKnown RBP13.83□□□□□ -0.2
SYVN1-204ENST00000449943 OVOS2A0A0J9YW53 1432 aa13.83□□□□□ -0.2
SYVN1-204ENST00000449943 USP6P35125 1406 aa13.83□□□□□ -0.2
SYVN1-204ENST00000449943 OVOS2Q6IE36 1432 aa13.83□□□□□ -0.2
SYVN1-204ENST00000449943 PNMA6EA0A0J9YXQ4 647 aa13.83□□□□□ -0.2
SYVN1-204ENST00000449943 CLEC17AQ6ZS10 378 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms