RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 LMOD2Q6P5Q4 547 aa27.69■■■□□ 2.02
NPAS1-202ENST00000449844 VIRMAQ69YN4 1812 aaKnown RBP27.69■■■□□ 2.02
NPAS1-202ENST00000449844 ITPRIPQ8IWB1 547 aa27.68■■■□□ 2.02
NPAS1-202ENST00000449844 ALS2Q96Q42 1657 aa27.68■■■□□ 2.02
NPAS1-202ENST00000449844 CFAP44Q96MT7 982 aa27.67■■■□□ 2.02
NPAS1-202ENST00000449844 VAMP4O75379 141 aa27.67■■■□□ 2.02
NPAS1-202ENST00000449844 IP6K1Q92551 441 aa27.67■■■□□ 2.02
NPAS1-202ENST00000449844 LTV1Q96GA3 475 aaPredicted RBP27.66■■■□□ 2.02
NPAS1-202ENST00000449844 PDZRN3Q9UPQ7 1066 aa27.66■■■□□ 2.02
NPAS1-202ENST00000449844 FAM83GA6ND36 823 aa27.65■■■□□ 2.02
NPAS1-202ENST00000449844 HDAC1Q13547 482 aaPredicted RBP27.65■■■□□ 2.02
NPAS1-202ENST00000449844 MBIPQ9NS73 344 aa27.65■■■□□ 2.02
NPAS1-202ENST00000449844 TMEM57Q8N5G2 664 aa27.65■■■□□ 2.02
NPAS1-202ENST00000449844 ZBTB7CA1YPR0 619 aa27.64■■■□□ 2.02
NPAS1-202ENST00000449844 ARHGAP45Q92619 1136 aa27.64■■■□□ 2.02
NPAS1-202ENST00000449844 USP19O94966 1318 aa27.64■■■□□ 2.02
NPAS1-202ENST00000449844 GCP02774 474 aa27.63■■■□□ 2.01
NPAS1-202ENST00000449844 DCTN1Q14203 1278 aa27.63■■■□□ 2.01
NPAS1-202ENST00000449844 MRPL50Q8N5N7 158 aaKnown RBP27.62■■■□□ 2.01
NPAS1-202ENST00000449844 PLEKHG5O94827 1062 aa27.62■■■□□ 2.01
NPAS1-202ENST00000449844 ZNF335Q9H4Z2 1342 aaPredicted RBP27.62■■■□□ 2.01
NPAS1-202ENST00000449844 ZBTB40Q9NUA8 1239 aa27.61■■■□□ 2.01
NPAS1-202ENST00000449844 NPHP3Q7Z494 1330 aa27.6■■■□□ 2.01
NPAS1-202ENST00000449844 MTHFSDQ2M296 383 aaKnown RBP27.59■■■□□ 2.01
NPAS1-202ENST00000449844 CHMP4BQ9H444 224 aaKnown RBP27.59■■■□□ 2.01
NPAS1-202ENST00000449844 TSPYL6Q8N831 410 aa27.58■■■□□ 2.01
NPAS1-202ENST00000449844 GAS2L2Q8NHY3 880 aa27.58■■■□□ 2.01
NPAS1-202ENST00000449844 ARHGEF25Q86VW2 580 aa27.58■■■□□ 2.01
NPAS1-202ENST00000449844 DDX17Q92841 729 aaKnown RBP27.58■■■□□ 2.01
NPAS1-202ENST00000449844 TWISTNBQ3B726 338 aaPredicted RBP27.57■■■□□ 2
NPAS1-202ENST00000449844 MCM10Q7L590 875 aa27.57■■■□□ 2
NPAS1-202ENST00000449844 RGPD2P0DJD1 1756 aa27.56■■■□□ 2
NPAS1-202ENST00000449844 MED1Q15648 1581 aaPredicted RBP27.55■■■□□ 2
NPAS1-202ENST00000449844 TNS3Q68CZ2 1445 aa27.54■■■□□ 2
NPAS1-202ENST00000449844 RTF1Q92541 710 aaKnown RBP27.54■■■□□ 2
NPAS1-202ENST00000449844 PXDNQ92626 1479 aa27.54■■■□□ 2
NPAS1-202ENST00000449844 SMC5Q8IY18 1101 aa27.53■■■□□ 2
NPAS1-202ENST00000449844 USHBP1Q8N6Y0 703 aa27.53■■■□□ 2
NPAS1-202ENST00000449844 HAP1P54257 671 aaPredicted RBP27.53■■■□□ 2
NPAS1-202ENST00000449844 C8orf58Q8NAV2 365 aa27.53■■■□□ 2
NPAS1-202ENST00000449844 CRB1P82279 1406 aa27.5■■□□□ 1.99
NPAS1-202ENST00000449844 NBPF6Q5VWK0 638 aa27.5■■□□□ 1.99
NPAS1-202ENST00000449844 NBPF4Q96M43 638 aa27.5■■□□□ 1.99
NPAS1-202ENST00000449844 ABCC4O15439 1325 aa27.5■■□□□ 1.99
NPAS1-202ENST00000449844 CHL1O00533 1208 aa27.5■■□□□ 1.99
NPAS1-202ENST00000449844 NBR1Q14596 966 aa27.5■■□□□ 1.99
NPAS1-202ENST00000449844 API5Q9BZZ5 524 aaKnown RBP27.5■■□□□ 1.99
NPAS1-202ENST00000449844 RGPD5Q99666 1765 aa27.49■■□□□ 1.99
NPAS1-202ENST00000449844 ELL2O00472 640 aaPredicted RBP27.49■■□□□ 1.99
NPAS1-202ENST00000449844 BRINP3Q76B58 766 aa27.49■■□□□ 1.99
NPAS1-202ENST00000449844 LRRC37A3O60309 1634 aa27.49■■□□□ 1.99
NPAS1-202ENST00000449844 DAXXQ9UER7 740 aaPredicted RBP27.48■■□□□ 1.99
NPAS1-202ENST00000449844 ZBTB7BO15156 539 aaPredicted RBP27.48■■□□□ 1.99
NPAS1-202ENST00000449844 HTATSF1O43719 755 aaKnown RBP27.48■■□□□ 1.99
NPAS1-202ENST00000449844 KIAA0232Q92628 1395 aa27.48■■□□□ 1.99
NPAS1-202ENST00000449844 ANKRD24Q8TF21 1146 aa27.46■■□□□ 1.99
NPAS1-202ENST00000449844 LRRC59Q96AG4 307 aaKnown RBP27.46■■□□□ 1.99
NPAS1-202ENST00000449844 CRYBG1Q9Y4K1 1723 aa27.46■■□□□ 1.99
NPAS1-202ENST00000449844 GNAT3A8MTJ3 354 aa27.46■■□□□ 1.99
NPAS1-202ENST00000449844 SPATA31A3Q5VYP0 1347 aa27.46■■□□□ 1.99
NPAS1-202ENST00000449844 MAP3K5Q99683 1374 aa27.46■■□□□ 1.99
NPAS1-202ENST00000449844 CAMTA1Q9Y6Y1 1673 aa27.46■■□□□ 1.99
NPAS1-202ENST00000449844 ZC3H6P61129 1189 aaKnown RBP27.45■■□□□ 1.99
NPAS1-202ENST00000449844 SLAIN2Q9P270 581 aa27.45■■□□□ 1.98
NPAS1-202ENST00000449844 NCAPD2Q15021 1401 aa27.43■■□□□ 1.98
NPAS1-202ENST00000449844 SEC24BO95487 1268 aa27.43■■□□□ 1.98
NPAS1-202ENST00000449844 AXIN2Q9Y2T1 843 aa27.42■■□□□ 1.98
NPAS1-202ENST00000449844 RTL5Q5HYW3 569 aaPredicted RBP27.41■■□□□ 1.98
NPAS1-202ENST00000449844 UPF2Q9HAU5 1272 aaKnown RBP27.41■■□□□ 1.98
NPAS1-202ENST00000449844 NUCB1Q02818 461 aa27.41■■□□□ 1.98
NPAS1-202ENST00000449844 TSPYL4Q9UJ04 414 aa27.4■■□□□ 1.98
NPAS1-202ENST00000449844 COL18A1P39060 1754 aa27.39■■□□□ 1.98
NPAS1-202ENST00000449844 CABLES1Q8TDN4 633 aa27.39■■□□□ 1.98
NPAS1-202ENST00000449844 GCC1Q96CN9 775 aa27.38■■□□□ 1.97
NPAS1-202ENST00000449844 ERBB3P21860 1342 aa27.38■■□□□ 1.97
NPAS1-202ENST00000449844 ABCC6O95255 1503 aa27.38■■□□□ 1.97
NPAS1-202ENST00000449844 LMO7Q8WWI1 1683 aa27.37■■□□□ 1.97
NPAS1-202ENST00000449844 USP35Q9P2H5 1018 aa27.37■■□□□ 1.97
NPAS1-202ENST00000449844 KRT24Q2M2I5 525 aa27.36■■□□□ 1.97
NPAS1-202ENST00000449844 MIS18AQ9NYP9 233 aa27.36■■□□□ 1.97
NPAS1-202ENST00000449844 SOS2Q07890 1332 aaPredicted RBP27.36■■□□□ 1.97
NPAS1-202ENST00000449844 SLC4A3P48751 1232 aa27.35■■□□□ 1.97
NPAS1-202ENST00000449844 PLEKHO1Q53GL0 409 aaPredicted RBP27.35■■□□□ 1.97
NPAS1-202ENST00000449844 INTS3Q68E01 1043 aaKnown RBP27.34■■□□□ 1.97
NPAS1-202ENST00000449844 CHD1LQ86WJ1 897 aa27.34■■□□□ 1.97
NPAS1-202ENST00000449844 IL17REQ8NFR9 667 aa27.34■■□□□ 1.97
NPAS1-202ENST00000449844 FAM208AQ9UK61 1670 aaKnown RBP27.34■■□□□ 1.97
NPAS1-202ENST00000449844 TBC1D32Q96NH3 1257 aa27.34■■□□□ 1.97
NPAS1-202ENST00000449844 AMOTQ4VCS5 1084 aa27.33■■□□□ 1.97
NPAS1-202ENST00000449844 PTPRCP08575 1304 aa27.33■■□□□ 1.97
NPAS1-202ENST00000449844 NHSL1Q5SYE7 1610 aa27.33■■□□□ 1.97
NPAS1-202ENST00000449844 ZNF530Q6P9A1 599 aaPredicted RBP27.32■■□□□ 1.96
NPAS1-202ENST00000449844 CPDO75976 1380 aa27.32■■□□□ 1.96
NPAS1-202ENST00000449844 RGS12O14924 1447 aa27.31■■□□□ 1.96
NPAS1-202ENST00000449844 BECN1Q14457 450 aa27.3■■□□□ 1.96
NPAS1-202ENST00000449844 C1orf115Q9H7X2 142 aa27.3■■□□□ 1.96
NPAS1-202ENST00000449844 AKAP4Q5JQC9 854 aa27.29■■□□□ 1.96
NPAS1-202ENST00000449844 CEMIPQ8WUJ3 1361 aa27.29■■□□□ 1.96
NPAS1-202ENST00000449844 BABAM1Q9NWV8 329 aa27.29■■□□□ 1.96
NPAS1-202ENST00000449844 TAF7Q15545 349 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms