RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ADGRB2O60241 1585 aa11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 GIMAP6Q6P9H5 292 aa11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 OTUD7AQ8TE49 926 aaPredicted RBP11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 INTS4Q96HW7 963 aaKnown RBP11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 PLEKHF1Q96S99 279 aa11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 PAXBP1Q9Y5B6 917 aa11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 APBB1O00213 710 aa11.31□□□□□ -0.6
SYNPO2-204ENST00000448416 TULP2O00295 520 aa11.31□□□□□ -0.6
SYNPO2-204ENST00000448416 DCTPP1Q9H773 170 aa11.31□□□□□ -0.6
SYNPO2-204ENST00000448416 TSPYL1Q9H0U9 437 aa11.31□□□□□ -0.6
SYNPO2-204ENST00000448416 SPHKAPQ2M3C7 1700 aa11.31□□□□□ -0.6
SYNPO2-204ENST00000448416 VGFO15240 615 aaPredicted RBP11.31□□□□□ -0.6
SYNPO2-204ENST00000448416 SAMD9LQ8IVG5 1584 aa11.31□□□□□ -0.6
SYNPO2-204ENST00000448416 ERCC6Q03468 1493 aa11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 ZNF397Q8NF99 534 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 ARHGAP45Q92619 1136 aa11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 ZNF428Q96B54 188 aa11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 CNPY2Q9Y2B0 182 aa11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 TCHHQ07283 1943 aa11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 SPAG9O60271 1321 aaKnown RBP11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 DRC7Q8IY82 874 aa11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 ZNF592Q92610 1267 aa11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 UBE2HP62256 183 aa11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 CERS3Q8IU89 383 aa11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 MAST1Q9Y2H9 1570 aa11.3□□□□□ -0.6
SYNPO2-204ENST00000448416 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
SYNPO2-204ENST00000448416 MRPL50Q8N5N7 158 aaKnown RBP11.29□□□□□ -0.6
SYNPO2-204ENST00000448416 ATP10BO94823 1461 aa11.29□□□□□ -0.6
SYNPO2-204ENST00000448416 CCDC186Q7Z3E2 898 aa11.29□□□□□ -0.6
SYNPO2-204ENST00000448416 MCCP23508 829 aa11.29□□□□□ -0.6
SYNPO2-204ENST00000448416 TPD52L1Q16890 204 aaPredicted RBP11.29□□□□□ -0.6
SYNPO2-204ENST00000448416 AEBP1Q8IUX7 1158 aa11.29□□□□□ -0.6
SYNPO2-204ENST00000448416 ELL2O00472 640 aaPredicted RBP11.29□□□□□ -0.6
SYNPO2-204ENST00000448416 KMT5BQ4FZB7 885 aa11.29□□□□□ -0.6
SYNPO2-204ENST00000448416 SRCIN1Q9C0H9 1055 aa11.29□□□□□ -0.6
SYNPO2-204ENST00000448416 PPRC1Q5VV67 1664 aaKnown RBP11.28□□□□□ -0.6
SYNPO2-204ENST00000448416 LRMPQ12912 555 aa11.28□□□□□ -0.6
SYNPO2-204ENST00000448416 TMEM87AQ8NBN3 555 aa11.28□□□□□ -0.6
SYNPO2-204ENST00000448416 AEBP2Q6ZN18 517 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2-204ENST00000448416 CARMIL2Q6F5E8 1435 aa11.28□□□□□ -0.6
SYNPO2-204ENST00000448416 FAM193AP78312 1265 aa11.28□□□□□ -0.6
SYNPO2-204ENST00000448416 FUCA2Q9BTY2 467 aa11.28□□□□□ -0.6
SYNPO2-204ENST00000448416 SYCP2Q9BX26 1530 aa11.28□□□□□ -0.6
SYNPO2-204ENST00000448416 FIBPO43427 364 aa11.27□□□□□ -0.6
SYNPO2-204ENST00000448416 TNNT3P45378 269 aaPredicted RBP11.27□□□□□ -0.6
SYNPO2-204ENST00000448416 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.27□□□□□ -0.6
SYNPO2-204ENST00000448416 V9GYY5 206 aaPredicted RBP11.27□□□□□ -0.6
SYNPO2-204ENST00000448416 ATAD2Q6PL18 1390 aa11.27□□□□□ -0.6
SYNPO2-204ENST00000448416 PIK3R4Q99570 1358 aa11.27□□□□□ -0.6
SYNPO2-204ENST00000448416 VAMP4O75379 141 aa11.27□□□□□ -0.61
SYNPO2-204ENST00000448416 CREBRFQ8IUR6 639 aa11.27□□□□□ -0.61
SYNPO2-204ENST00000448416 TRAPPC8Q9Y2L5 1435 aa11.27□□□□□ -0.61
SYNPO2-204ENST00000448416 CCDC192P0DO97 292 aa11.27□□□□□ -0.61
SYNPO2-204ENST00000448416 NOL10Q9BSC4 688 aaKnown RBP11.27□□□□□ -0.61
SYNPO2-204ENST00000448416 ST7Q9NRC1 585 aa11.27□□□□□ -0.61
SYNPO2-204ENST00000448416 HNRNPH2P55795 449 aaKnown RBP11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 ABCC4O15439 1325 aa11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 CEP135Q66GS9 1140 aa11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 RTF1Q92541 710 aaKnown RBP11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 ADGRF5Q8IZF2 1346 aa11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 UPF3BQ9BZI7 483 aaKnown RBP11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 FEZ2Q9UHY8 353 aaPredicted RBP11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 PTCH1Q13635 1447 aa11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 YEATS2Q9ULM3 1422 aa11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 SBNO2Q9Y2G9 1366 aa11.26□□□□□ -0.61
SYNPO2-204ENST00000448416 ABCA8O94911 1581 aa11.25□□□□□ -0.61
SYNPO2-204ENST00000448416 ZNF215Q9UL58 517 aaPredicted RBP11.25□□□□□ -0.61
SYNPO2-204ENST00000448416 PALD1Q9ULE6 856 aa11.25□□□□□ -0.61
SYNPO2-204ENST00000448416 RBM6P78332 1123 aaKnown RBP11.25□□□□□ -0.61
SYNPO2-204ENST00000448416 FBXO38Q6PIJ6 1188 aa11.25□□□□□ -0.61
SYNPO2-204ENST00000448416 TSPYL6Q8N831 410 aa11.25□□□□□ -0.61
SYNPO2-204ENST00000448416 NRBP1Q9UHY1 535 aa11.25□□□□□ -0.61
SYNPO2-204ENST00000448416 KIAA1210Q9ULL0 1709 aa11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 CDC42BPBQ9Y5S2 1711 aa11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 CYP2C19P33261 490 aa11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 FAM200AQ8TCP9 573 aa11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 ZSCAN22P10073 491 aaPredicted RBP11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 ZSCAN25Q6NSZ9 544 aa11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 ZFP91Q96JP5 570 aaPredicted RBP11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 TRIM5Q9C035 493 aa11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 FAM53CQ9NYF3 392 aa11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 ANKRD44Q8N8A2 993 aa11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 ATP6V1DQ9Y5K8 247 aa11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 RPAP1Q9BWH6 1393 aaPredicted RBP11.24□□□□□ -0.61
SYNPO2-204ENST00000448416 ELF2Q15723 593 aa11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 UHRF1BP1LA0JNW5 1464 aa11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 LUZP1Q86V48 1076 aa11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 TRPM2O94759 1503 aa11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 NPHP1O15259 732 aa11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 ANAPC15P60006 121 aa11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 SRPK2P78362 688 aaKnown RBP11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 RAD51AP2Q09MP3 1159 aa11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 BMS1Q14692 1282 aaKnown RBP11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 RTL1A6NKG5 1358 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms