RNA–Protein interactions for RNA: ENST00000448361.5

COMMD3-203, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-203ENST00000448361 PANK3Q9H999 370 aa19.41■□□□□ 0.7
COMMD3-203ENST00000448361 EMILIN1Q9Y6C2 1016 aa19.41■□□□□ 0.7
COMMD3-203ENST00000448361 BTAF1O14981 1849 aa19.41■□□□□ 0.7
COMMD3-203ENST00000448361 NSD2O96028 1365 aa19.41■□□□□ 0.7
COMMD3-203ENST00000448361 NBPF6Q5VWK0 638 aa19.4■□□□□ 0.7
COMMD3-203ENST00000448361 NBPF4Q96M43 638 aa19.4■□□□□ 0.7
COMMD3-203ENST00000448361 KIF7Q2M1P5 1343 aa19.39■□□□□ 0.69
COMMD3-203ENST00000448361 SRCAPQ6ZRS2 3230 aa19.39■□□□□ 0.69
COMMD3-203ENST00000448361 DOT1LQ8TEK3 1739 aa19.39■□□□□ 0.69
COMMD3-203ENST00000448361 PSDA5PKW4 1024 aaPredicted RBP19.38■□□□□ 0.69
COMMD3-203ENST00000448361 PKD1L3Q7Z443 1732 aa19.38■□□□□ 0.69
COMMD3-203ENST00000448361 WASHC2AQ641Q2 1341 aa19.37■□□□□ 0.69
COMMD3-203ENST00000448361 POLKQ9UBT6 870 aa19.36■□□□□ 0.69
COMMD3-203ENST00000448361 KCNQ2O43526 872 aa19.35■□□□□ 0.69
COMMD3-203ENST00000448361 R3HDM1Q15032 1099 aaKnown RBP19.35■□□□□ 0.69
COMMD3-203ENST00000448361 USHBP1Q8N6Y0 703 aa19.34■□□□□ 0.69
COMMD3-203ENST00000448361 PROM2Q8N271 834 aa19.33■□□□□ 0.68
COMMD3-203ENST00000448361 PAPPAQ13219 1627 aa19.33■□□□□ 0.68
COMMD3-203ENST00000448361 KAT6BQ8WYB5 2073 aa19.32■□□□□ 0.68
COMMD3-203ENST00000448361 ZCRB1Q8TBF4 217 aaKnown RBP19.32■□□□□ 0.68
COMMD3-203ENST00000448361 ACSBG1Q96GR2 724 aa19.32■□□□□ 0.68
COMMD3-203ENST00000448361 NBPF14Q5TI25 921 aa19.31■□□□□ 0.68
COMMD3-203ENST00000448361 DDX54Q8TDD1 881 aaKnown RBP19.31■□□□□ 0.68
COMMD3-203ENST00000448361 RAPGEF4Q8WZA2 1011 aa19.31■□□□□ 0.68
COMMD3-203ENST00000448361 CASZ1Q86V15 1759 aa19.31■□□□□ 0.68
COMMD3-203ENST00000448361 PPM1GO15355 546 aaPredicted RBP19.3■□□□□ 0.68
COMMD3-203ENST00000448361 LY75O60449 1722 aa19.3■□□□□ 0.68
COMMD3-203ENST00000448361 TATP17735 454 aaPredicted RBP19.29■□□□□ 0.68
COMMD3-203ENST00000448361 TXNRD1Q16881 649 aa19.29■□□□□ 0.68
COMMD3-203ENST00000448361 AMER1Q5JTC6 1135 aaPredicted RBP19.29■□□□□ 0.68
COMMD3-203ENST00000448361 KNSTRNQ9Y448 316 aa19.29■□□□□ 0.68
COMMD3-203ENST00000448361 TOGARAM1Q9Y4F4 1720 aa19.28■□□□□ 0.68
COMMD3-203ENST00000448361 TNNT2P45379 298 aaPredicted RBP19.28■□□□□ 0.68
COMMD3-203ENST00000448361 ANO8Q9HCE9 1232 aaPredicted RBP19.28■□□□□ 0.68
COMMD3-203ENST00000448361 EYA1Q99502 592 aa19.27■□□□□ 0.68
COMMD3-203ENST00000448361 PLEKHG2Q9H7P9 1386 aa19.27■□□□□ 0.68
COMMD3-203ENST00000448361 PCDH11XQ9BZA7 1347 aa19.26■□□□□ 0.67
COMMD3-203ENST00000448361 PCDH11YQ9BZA8 1340 aa19.26■□□□□ 0.67
COMMD3-203ENST00000448361 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
COMMD3-203ENST00000448361 EIF4A2Q14240 407 aaKnown RBP19.26■□□□□ 0.67
COMMD3-203ENST00000448361 MORC1Q86VD1 984 aa19.26■□□□□ 0.67
COMMD3-203ENST00000448361 ITGB4P16144 1822 aa19.25■□□□□ 0.67
COMMD3-203ENST00000448361 IGSF1Q8N6C5 1336 aa19.25■□□□□ 0.67
COMMD3-203ENST00000448361 QSER1Q2KHR3 1735 aa19.23■□□□□ 0.67
COMMD3-203ENST00000448361 CYP27B1O15528 508 aa19.23■□□□□ 0.67
COMMD3-203ENST00000448361 PRIM1P49642 420 aaKnown RBP19.23■□□□□ 0.67
COMMD3-203ENST00000448361 NPC1L1Q9UHC9 1359 aa19.22■□□□□ 0.67
COMMD3-203ENST00000448361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.22■□□□□ 0.67
COMMD3-203ENST00000448361 TUBGCP6Q96RT7 1819 aa19.19■□□□□ 0.66
COMMD3-203ENST00000448361 NKX1-1Q15270 411 aaPredicted RBP19.19■□□□□ 0.66
COMMD3-203ENST00000448361 SLC15A2Q16348 729 aa19.19■□□□□ 0.66
COMMD3-203ENST00000448361 SYTL4Q96C24 671 aaPredicted RBP19.19■□□□□ 0.66
COMMD3-203ENST00000448361 LRRC4BQ9NT99 713 aa19.19■□□□□ 0.66
COMMD3-203ENST00000448361 SPG7Q9UQ90 795 aa19.19■□□□□ 0.66
COMMD3-203ENST00000448361 SLC27A3Q5K4L6 730 aa19.18■□□□□ 0.66
COMMD3-203ENST00000448361 STK32BQ9NY57 414 aa19.18■□□□□ 0.66
COMMD3-203ENST00000448361 KDRP35968 1356 aa19.17■□□□□ 0.66
COMMD3-203ENST00000448361 TAF1LQ8IZX4 1826 aa19.16■□□□□ 0.66
COMMD3-203ENST00000448361 C5P01031 1676 aa19.16■□□□□ 0.66
COMMD3-203ENST00000448361 PDGFDQ9GZP0 370 aaPredicted RBP19.15■□□□□ 0.66
COMMD3-203ENST00000448361 IL13P35225 146 aa19.14■□□□□ 0.65
COMMD3-203ENST00000448361 ZNF827Q17R98 1081 aa19.14■□□□□ 0.65
COMMD3-203ENST00000448361 SPON1Q9HCB6 807 aa19.14■□□□□ 0.65
COMMD3-203ENST00000448361 PHKG2P15735 406 aa19.13■□□□□ 0.65
COMMD3-203ENST00000448361 CC2D1BQ5T0F9 858 aaKnown RBP19.13■□□□□ 0.65
COMMD3-203ENST00000448361 AKT1S1Q96B36 256 aa19.13■□□□□ 0.65
COMMD3-203ENST00000448361 COL3A1P02461 1466 aaPredicted RBP19.13■□□□□ 0.65
COMMD3-203ENST00000448361 COL24A1Q17RW2 1714 aa19.13■□□□□ 0.65
COMMD3-203ENST00000448361 MTHFSP49914 203 aa19.12■□□□□ 0.65
COMMD3-203ENST00000448361 IFNL2Q8IZJ0 200 aa19.12■□□□□ 0.65
COMMD3-203ENST00000448361 PALLDQ8WX93 1383 aa19.11■□□□□ 0.65
COMMD3-203ENST00000448361 AEBP1Q8IUX7 1158 aa19.11■□□□□ 0.65
COMMD3-203ENST00000448361 KCNQ4P56696 695 aa19.09■□□□□ 0.65
COMMD3-203ENST00000448361 MPRIPQ6WCQ1 1025 aa19.09■□□□□ 0.65
COMMD3-203ENST00000448361 CCNL1Q9UK58 526 aaPredicted RBP19.09■□□□□ 0.65
COMMD3-203ENST00000448361 AMOTQ4VCS5 1084 aa19.08■□□□□ 0.64
COMMD3-203ENST00000448361 PIGBQ92521 554 aa19.08■□□□□ 0.64
COMMD3-203ENST00000448361 SCN11AQ9UI33 1791 aa19.08■□□□□ 0.64
COMMD3-203ENST00000448361 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.64
COMMD3-203ENST00000448361 ZNF831Q5JPB2 1677 aa19.08■□□□□ 0.64
COMMD3-203ENST00000448361 ZBTB7AO95365 584 aa19.07■□□□□ 0.64
COMMD3-203ENST00000448361 PTGER2P43116 358 aa19.07■□□□□ 0.64
COMMD3-203ENST00000448361 PLEKHO1Q53GL0 409 aaPredicted RBP19.07■□□□□ 0.64
COMMD3-203ENST00000448361 SULT6B1Q6IMI4 303 aa19.07■□□□□ 0.64
COMMD3-203ENST00000448361 C4BP0C0L5 1744 aa19.07■□□□□ 0.64
COMMD3-203ENST00000448361 VIRMAQ69YN4 1812 aaKnown RBP19.07■□□□□ 0.64
COMMD3-203ENST00000448361 PNPLA7Q6ZV29 1317 aa19.06■□□□□ 0.64
COMMD3-203ENST00000448361 SMARCC1Q92922 1105 aaPredicted RBP19.06■□□□□ 0.64
COMMD3-203ENST00000448361 MTFR1LQ9H019 292 aa19.06■□□□□ 0.64
COMMD3-203ENST00000448361 HSP90AB1P08238 724 aaKnown RBP19.05■□□□□ 0.64
COMMD3-203ENST00000448361 ZNF530Q6P9A1 599 aaPredicted RBP19.05■□□□□ 0.64
COMMD3-203ENST00000448361 SGIP1Q9BQI5 828 aa19.05■□□□□ 0.64
COMMD3-203ENST00000448361 TMOD3Q9NYL9 352 aa19.05■□□□□ 0.64
COMMD3-203ENST00000448361 UBR3Q6ZT12 1888 aa19.05■□□□□ 0.64
COMMD3-203ENST00000448361 ADAMTS7Q9UKP4 1686 aa19.05■□□□□ 0.64
COMMD3-203ENST00000448361 DCAF5Q96JK2 942 aa19.04■□□□□ 0.64
COMMD3-203ENST00000448361 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
COMMD3-203ENST00000448361 DIAPH1O60610 1272 aaKnown RBP19.03■□□□□ 0.64
COMMD3-203ENST00000448361 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.64
COMMD3-203ENST00000448361 SLC16A10Q8TF71 515 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms