RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 DDB1Q16531 1140 aa7.59□□□□□ -1.2
PROM1-201ENST00000447510 RTL1A6NKG5 1358 aa7.58□□□□□ -1.2
PROM1-201ENST00000447510 WDR17Q8IZU2 1322 aa7.58□□□□□ -1.2
PROM1-201ENST00000447510 CALD1Q05682 793 aaKnown RBP7.58□□□□□ -1.2
PROM1-201ENST00000447510 PHLPP1O60346 1717 aa7.58□□□□□ -1.2
PROM1-201ENST00000447510 HSP90AA1P07900 732 aaKnown RBP7.58□□□□□ -1.2
PROM1-201ENST00000447510 AMOTQ4VCS5 1084 aa7.58□□□□□ -1.2
PROM1-201ENST00000447510 ILDR1Q86SU0 546 aaPredicted RBP7.58□□□□□ -1.2
PROM1-201ENST00000447510 ZCRB1Q8TBF4 217 aaKnown RBP7.58□□□□□ -1.2
PROM1-201ENST00000447510 KIF24Q5T7B8 1368 aa7.58□□□□□ -1.2
PROM1-201ENST00000447510 SKAP1Q86WV1 359 aa7.57□□□□□ -1.2
PROM1-201ENST00000447510 CARD10Q9BWT7 1032 aa7.57□□□□□ -1.2
PROM1-201ENST00000447510 MYOM1P52179 1685 aa7.57□□□□□ -1.2
PROM1-201ENST00000447510 HSP90AB1P08238 724 aaKnown RBP7.56□□□□□ -1.2
PROM1-201ENST00000447510 NFE2L2Q16236 605 aa7.56□□□□□ -1.2
PROM1-201ENST00000447510 CANXP27824 592 aaKnown RBP7.56□□□□□ -1.2
PROM1-201ENST00000447510 RXRBP28702 533 aa7.56□□□□□ -1.2
PROM1-201ENST00000447510 MPRIPQ6WCQ1 1025 aa7.56□□□□□ -1.2
PROM1-201ENST00000447510 IFNL2Q8IZJ0 200 aa7.56□□□□□ -1.2
PROM1-201ENST00000447510 DDRGK1Q96HY6 314 aa7.56□□□□□ -1.2
PROM1-201ENST00000447510 CDCA7Q9BWT1 371 aaPredicted RBP7.56□□□□□ -1.2
PROM1-201ENST00000447510 CPDO75976 1380 aa7.56□□□□□ -1.2
PROM1-201ENST00000447510 GNAT3A8MTJ3 354 aa7.56□□□□□ -1.2
PROM1-201ENST00000447510 FRAT2O75474 233 aaPredicted RBP7.56□□□□□ -1.2
PROM1-201ENST00000447510 TMPOP42166 694 aaKnown RBP7.56□□□□□ -1.2
PROM1-201ENST00000447510 BLMP54132 1417 aaPredicted RBP7.56□□□□□ -1.2
PROM1-201ENST00000447510 CABP4P57796 275 aa7.55□□□□□ -1.2
PROM1-201ENST00000447510 TTC5Q8N0Z6 440 aa7.55□□□□□ -1.2
PROM1-201ENST00000447510 XIRP1Q702N8 1843 aaKnown RBP7.55□□□□□ -1.2
PROM1-201ENST00000447510 PHACTR3Q96KR7 559 aa7.55□□□□□ -1.2
PROM1-201ENST00000447510 GOLGA2Q08379 1002 aa7.55□□□□□ -1.2
PROM1-201ENST00000447510 DCTN1Q14203 1278 aa7.55□□□□□ -1.2
PROM1-201ENST00000447510 FAM43AQ8N2R8 423 aa7.55□□□□□ -1.2
PROM1-201ENST00000447510 CDK12Q9NYV4 1490 aaPredicted RBP7.55□□□□□ -1.2
PROM1-201ENST00000447510 TOPAZ1Q8N9V7 1692 aa7.55□□□□□ -1.2
PROM1-201ENST00000447510 MTHFSDQ2M296 383 aaKnown RBP7.54□□□□□ -1.2
PROM1-201ENST00000447510 MCM10Q7L590 875 aa7.54□□□□□ -1.2
PROM1-201ENST00000447510 GJD4Q96KN9 370 aaPredicted RBP7.54□□□□□ -1.2
PROM1-201ENST00000447510 ARID3AQ99856 593 aa7.54□□□□□ -1.2
PROM1-201ENST00000447510 MYH16Q9H6N6 1097 aa7.54□□□□□ -1.2
PROM1-201ENST00000447510 KAT6BQ8WYB5 2073 aa7.54□□□□□ -1.2
PROM1-201ENST00000447510 EXOC6Q8TAG9 804 aa7.54□□□□□ -1.2
PROM1-201ENST00000447510 THUMPD2Q9BTF0 503 aaKnown RBP7.54□□□□□ -1.2
PROM1-201ENST00000447510 IGSF1Q8N6C5 1336 aa7.54□□□□□ -1.2
PROM1-201ENST00000447510 AHDC1Q5TGY3 1603 aaPredicted RBP7.54□□□□□ -1.2
PROM1-201ENST00000447510 MON2Q7Z3U7 1717 aa7.54□□□□□ -1.2
PROM1-201ENST00000447510 VPS72Q15906 364 aa7.54□□□□□ -1.2
PROM1-201ENST00000447510 NGEFQ8N5V2 710 aa7.54□□□□□ -1.2
PROM1-201ENST00000447510 RBM6P78332 1123 aaKnown RBP7.53□□□□□ -1.2
PROM1-201ENST00000447510 SF3B2Q13435 895 aaKnown RBP7.53□□□□□ -1.2
PROM1-201ENST00000447510 ACSBG1Q96GR2 724 aa7.53□□□□□ -1.2
PROM1-201ENST00000447510 TSPYL4Q9UJ04 414 aa7.53□□□□□ -1.2
PROM1-201ENST00000447510 AKAP12Q02952 1782 aa7.53□□□□□ -1.2
PROM1-201ENST00000447510 KIF20BQ96Q89 1820 aa7.53□□□□□ -1.2
PROM1-201ENST00000447510 ELL2O00472 640 aaPredicted RBP7.53□□□□□ -1.2
PROM1-201ENST00000447510 TCERG1O14776 1098 aaKnown RBP7.53□□□□□ -1.2
PROM1-201ENST00000447510 SEPT12Q8IYM1 358 aa7.53□□□□□ -1.2
PROM1-201ENST00000447510 ZBED9Q6R2W3 1325 aa7.53□□□□□ -1.2
PROM1-201ENST00000447510 TMOD3Q9NYL9 352 aa7.53□□□□□ -1.2
PROM1-201ENST00000447510 ZNF330Q9Y3S2 320 aaPredicted RBP7.53□□□□□ -1.2
PROM1-201ENST00000447510 CRB1P82279 1406 aa7.53□□□□□ -1.2
PROM1-201ENST00000447510 GNAI1P63096 354 aa7.52□□□□□ -1.2
PROM1-201ENST00000447510 RBM42Q9BTD8 480 aaKnown RBP7.52□□□□□ -1.2
PROM1-201ENST00000447510 PCDH11XQ9BZA7 1347 aa7.52□□□□□ -1.2
PROM1-201ENST00000447510 PCDH11YQ9BZA8 1340 aa7.52□□□□□ -1.2
PROM1-201ENST00000447510 THRAP3Q9Y2W1 955 aaKnown RBP7.52□□□□□ -1.2
PROM1-201ENST00000447510 PIK3C2AO00443 1686 aa7.52□□□□□ -1.21
PROM1-201ENST00000447510 MED1Q15648 1581 aaPredicted RBP7.52□□□□□ -1.21
PROM1-201ENST00000447510 AKAP4Q5JQC9 854 aa7.52□□□□□ -1.21
PROM1-201ENST00000447510 FNBP4Q8N3X1 1017 aaPredicted RBP7.52□□□□□ -1.21
PROM1-201ENST00000447510 GZF1Q9H116 711 aaPredicted RBP7.52□□□□□ -1.21
PROM1-201ENST00000447510 SPATA31A1Q5TZJ5 1347 aa7.52□□□□□ -1.21
PROM1-201ENST00000447510 FAM182BQ5T319 152 aa7.52□□□□□ -1.21
PROM1-201ENST00000447510 SPATA31A5Q5VU36 1347 aa7.51□□□□□ -1.21
PROM1-201ENST00000447510 SPATA31A7Q8IWB4 1347 aa7.51□□□□□ -1.21
PROM1-201ENST00000447510 MIS18AQ9NYP9 233 aa7.51□□□□□ -1.21
PROM1-201ENST00000447510 BTBD11A6QL63 1104 aa7.51□□□□□ -1.21
PROM1-201ENST00000447510 E9PSI1 815 aa7.51□□□□□ -1.21
PROM1-201ENST00000447510 RGS3P49796 1198 aa7.51□□□□□ -1.21
PROM1-201ENST00000447510 SLKQ9H2G2 1235 aaPredicted RBP7.51□□□□□ -1.21
PROM1-201ENST00000447510 PTCD1O75127 700 aaKnown RBP7.5□□□□□ -1.21
PROM1-201ENST00000447510 EIF2S2P20042 333 aaKnown RBP7.5□□□□□ -1.21
PROM1-201ENST00000447510 KRT27Q7Z3Y8 459 aa7.5□□□□□ -1.21
PROM1-201ENST00000447510 WWC1Q8IX03 1113 aa7.5□□□□□ -1.21
PROM1-201ENST00000447510 DCAF5Q96JK2 942 aa7.5□□□□□ -1.21
PROM1-201ENST00000447510 BACH2Q9BYV9 841 aa7.5□□□□□ -1.21
PROM1-201ENST00000447510 RRAGDQ9NQL2 400 aaPredicted RBP7.5□□□□□ -1.21
PROM1-201ENST00000447510 NHSL1Q5SYE7 1610 aa7.5□□□□□ -1.21
PROM1-201ENST00000447510 MAP2P11137 1827 aaKnown RBP7.5□□□□□ -1.21
PROM1-201ENST00000447510 TAF7Q15545 349 aaPredicted RBP7.5□□□□□ -1.21
PROM1-201ENST00000447510 NECTIN2Q92692 538 aa7.5□□□□□ -1.21
PROM1-201ENST00000447510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.5□□□□□ -1.21
PROM1-201ENST00000447510 SLIT3O75094 1523 aa7.5□□□□□ -1.21
PROM1-201ENST00000447510 MAP3K5Q99683 1374 aa7.5□□□□□ -1.21
PROM1-201ENST00000447510 COL16A1Q07092 1604 aaPredicted RBP7.49□□□□□ -1.21
PROM1-201ENST00000447510 COL5A2P05997 1499 aaPredicted RBP7.49□□□□□ -1.21
PROM1-201ENST00000447510 PHKG2P15735 406 aa7.49□□□□□ -1.21
PROM1-201ENST00000447510 NFATC2IPQ8NCF5 419 aa7.49□□□□□ -1.21
PROM1-201ENST00000447510 TSR2Q969E8 191 aaKnown RBP7.49□□□□□ -1.21
PROM1-201ENST00000447510 LGR6Q9HBX8 967 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms