RNA–Protein interactions for RNA: ENST00000446764.5

GARNL3-209, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-209ENST00000446764 EZH2Q15910 746 aaKnown RBP28.28■■■□□ 2.12
GARNL3-209ENST00000446764 CAMKK2Q96RR4 588 aa28.28■■■□□ 2.12
GARNL3-209ENST00000446764 TNS1Q9HBL0 1735 aaKnown RBP28.27■■■□□ 2.12
GARNL3-209ENST00000446764 IGSF1Q8N6C5 1336 aa28.26■■■□□ 2.11
GARNL3-209ENST00000446764 ACSBG1Q96GR2 724 aa28.26■■■□□ 2.11
GARNL3-209ENST00000446764 KCNQ2O43526 872 aa28.25■■■□□ 2.11
GARNL3-209ENST00000446764 IL13P35225 146 aa28.25■■■□□ 2.11
GARNL3-209ENST00000446764 PLSCR1O15162 318 aa28.21■■■□□ 2.11
GARNL3-209ENST00000446764 PARD3Q8TEW0 1356 aa28.21■■■□□ 2.11
GARNL3-209ENST00000446764 PCDH11XQ9BZA7 1347 aa28.2■■■□□ 2.11
GARNL3-209ENST00000446764 PCDH11YQ9BZA8 1340 aa28.2■■■□□ 2.11
GARNL3-209ENST00000446764 CYP27B1O15528 508 aa28.18■■■□□ 2.1
GARNL3-209ENST00000446764 DDX10Q13206 875 aaKnown RBP28.18■■■□□ 2.1
GARNL3-209ENST00000446764 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.18■■■□□ 2.1
GARNL3-209ENST00000446764 SPG7Q9UQ90 795 aa28.18■■■□□ 2.1
GARNL3-209ENST00000446764 AEBP1Q8IUX7 1158 aa28.17■■■□□ 2.1
GARNL3-209ENST00000446764 DIAPH1O60610 1272 aaKnown RBP28.16■■■□□ 2.1
GARNL3-209ENST00000446764 SULT6B1Q6IMI4 303 aa28.16■■■□□ 2.1
GARNL3-209ENST00000446764 SBF2Q86WG5 1849 aa28.15■■■□□ 2.1
GARNL3-209ENST00000446764 PRIM1P49642 420 aaKnown RBP28.15■■■□□ 2.1
GARNL3-209ENST00000446764 SHANK3Q9BYB0 1731 aa28.15■■■□□ 2.1
GARNL3-209ENST00000446764 PPP2R1AP30153 589 aa28.14■■■□□ 2.1
GARNL3-209ENST00000446764 PLEKHG2Q9H7P9 1386 aa28.13■■■□□ 2.09
GARNL3-209ENST00000446764 PROM2Q8N271 834 aa28.12■■■□□ 2.09
GARNL3-209ENST00000446764 SYTL4Q96C24 671 aaPredicted RBP28.12■■■□□ 2.09
GARNL3-209ENST00000446764 NHSQ6T4R5 1651 aa28.12■■■□□ 2.09
GARNL3-209ENST00000446764 KDRP35968 1356 aa28.11■■■□□ 2.09
GARNL3-209ENST00000446764 COL3A1P02461 1466 aaPredicted RBP28.1■■■□□ 2.09
GARNL3-209ENST00000446764 NKX1-1Q15270 411 aaPredicted RBP28.1■■■□□ 2.09
GARNL3-209ENST00000446764 PHKG2P15735 406 aa28.09■■■□□ 2.09
GARNL3-209ENST00000446764 PLEKHO1Q53GL0 409 aaPredicted RBP28.09■■■□□ 2.09
GARNL3-209ENST00000446764 IFNL2Q8IZJ0 200 aa28.09■■■□□ 2.09
GARNL3-209ENST00000446764 TXNRD1Q16881 649 aa28.08■■■□□ 2.09
GARNL3-209ENST00000446764 CFAP53Q96M91 514 aa28.08■■■□□ 2.09
GARNL3-209ENST00000446764 PKD1L3Q7Z443 1732 aa28.08■■■□□ 2.09
GARNL3-209ENST00000446764 HMOX1P09601 288 aa28.07■■■□□ 2.08
GARNL3-209ENST00000446764 AMOTQ4VCS5 1084 aa28.07■■■□□ 2.08
GARNL3-209ENST00000446764 PSDA5PKW4 1024 aaPredicted RBP28.05■■■□□ 2.08
GARNL3-209ENST00000446764 U2SURPO15042 1029 aaKnown RBP28.04■■■□□ 2.08
GARNL3-209ENST00000446764 R3HDM1Q15032 1099 aaKnown RBP28.04■■■□□ 2.08
GARNL3-209ENST00000446764 RREB1Q92766 1687 aa28.03■■■□□ 2.08
GARNL3-209ENST00000446764 NBPF14Q5TI25 921 aa28.03■■■□□ 2.08
GARNL3-209ENST00000446764 ZNF530Q6P9A1 599 aaPredicted RBP28.02■■■□□ 2.08
GARNL3-209ENST00000446764 RGPD3A6NKT7 1758 aaPredicted RBP28.01■■■□□ 2.08
GARNL3-209ENST00000446764 RGPD4Q7Z3J3 1758 aa28.01■■■□□ 2.08
GARNL3-209ENST00000446764 DOT1LQ8TEK3 1739 aa28.01■■■□□ 2.07
GARNL3-209ENST00000446764 MPRIPQ6WCQ1 1025 aa28.01■■■□□ 2.07
GARNL3-209ENST00000446764 RALBP1Q15311 655 aa27.99■■■□□ 2.07
GARNL3-209ENST00000446764 NUP188Q5SRE5 1749 aa27.98■■■□□ 2.07
GARNL3-209ENST00000446764 BTAF1O14981 1849 aa27.98■■■□□ 2.07
GARNL3-209ENST00000446764 HSP90AB1P08238 724 aaKnown RBP27.98■■■□□ 2.07
GARNL3-209ENST00000446764 ANO8Q9HCE9 1232 aaPredicted RBP27.98■■■□□ 2.07
GARNL3-209ENST00000446764 NUDCQ9Y266 331 aa27.98■■■□□ 2.07
GARNL3-209ENST00000446764 PIGBQ92521 554 aa27.97■■■□□ 2.07
GARNL3-209ENST00000446764 C1orf141Q5JVX7 400 aa27.96■■■□□ 2.07
GARNL3-209ENST00000446764 DCAF5Q96JK2 942 aa27.96■■■□□ 2.07
GARNL3-209ENST00000446764 LRRC4BQ9NT99 713 aa27.96■■■□□ 2.07
GARNL3-209ENST00000446764 ZNF316A6NFI3 1004 aaPredicted RBP27.95■■■□□ 2.06
GARNL3-209ENST00000446764 SLC27A3Q5K4L6 730 aa27.94■■■□□ 2.06
GARNL3-209ENST00000446764 MTHFSDQ2M296 383 aaKnown RBP27.93■■■□□ 2.06
GARNL3-209ENST00000446764 TMOD3Q9NYL9 352 aa27.93■■■□□ 2.06
GARNL3-209ENST00000446764 TOGARAM1Q9Y4F4 1720 aa27.92■■■□□ 2.06
GARNL3-209ENST00000446764 ERVV-2B6SEH9 535 aa27.92■■■□□ 2.06
GARNL3-209ENST00000446764 U2AF1L5P0DN76 240 aaPredicted RBP27.92■■■□□ 2.06
GARNL3-209ENST00000446764 U2AF1Q01081 240 aaKnown RBP eCLIP27.92■■■□□ 2.06
GARNL3-209ENST00000446764 AKAP4Q5JQC9 854 aa27.92■■■□□ 2.06
GARNL3-209ENST00000446764 KDM6AO15550 1401 aaPredicted RBP27.92■■■□□ 2.06
GARNL3-209ENST00000446764 KCNQ4P56696 695 aa27.91■■■□□ 2.06
GARNL3-209ENST00000446764 RSPH6AQ9H0K4 717 aa27.91■■■□□ 2.06
GARNL3-209ENST00000446764 STK32BQ9NY57 414 aa27.91■■■□□ 2.06
GARNL3-209ENST00000446764 PALLDQ8WX93 1383 aa27.89■■■□□ 2.06
GARNL3-209ENST00000446764 SLC15A2Q16348 729 aa27.89■■■□□ 2.06
GARNL3-209ENST00000446764 SMARCC1Q92922 1105 aaPredicted RBP27.89■■■□□ 2.06
GARNL3-209ENST00000446764 CCNL1Q9UK58 526 aaPredicted RBP27.89■■■□□ 2.06
GARNL3-209ENST00000446764 PRKAR2BP31323 418 aa27.88■■■□□ 2.05
GARNL3-209ENST00000446764 ASAP1Q9ULH1 1129 aa27.87■■■□□ 2.05
GARNL3-209ENST00000446764 MYBBP1AQ9BQG0 1328 aaKnown RBP27.87■■■□□ 2.05
GARNL3-209ENST00000446764 CABP4P57796 275 aa27.86■■■□□ 2.05
GARNL3-209ENST00000446764 FCHSD2O94868 740 aa27.85■■■□□ 2.05
GARNL3-209ENST00000446764 ZNF827Q17R98 1081 aa27.85■■■□□ 2.05
GARNL3-209ENST00000446764 PHACTR3Q96KR7 559 aa27.85■■■□□ 2.05
GARNL3-209ENST00000446764 ATG3Q9NT62 314 aa27.85■■■□□ 2.05
GARNL3-209ENST00000446764 KAT6BQ8WYB5 2073 aa27.84■■■□□ 2.05
GARNL3-209ENST00000446764 GAS2L2Q8NHY3 880 aa27.84■■■□□ 2.05
GARNL3-209ENST00000446764 PRKRIP1Q9H875 184 aaPredicted RBP27.84■■■□□ 2.05
GARNL3-209ENST00000446764 LGR6Q9HBX8 967 aa27.84■■■□□ 2.05
GARNL3-209ENST00000446764 AKT1S1Q96B36 256 aa27.83■■■□□ 2.05
GARNL3-209ENST00000446764 PAPPAQ13219 1627 aa27.82■■■□□ 2.04
GARNL3-209ENST00000446764 RNMTO43148 476 aaKnown RBP27.82■■■□□ 2.04
GARNL3-209ENST00000446764 NFATC2IPQ8NCF5 419 aa27.82■■■□□ 2.04
GARNL3-209ENST00000446764 PDGFDQ9GZP0 370 aaPredicted RBP27.81■■■□□ 2.04
GARNL3-209ENST00000446764 LY75O60449 1722 aa27.81■■■□□ 2.04
GARNL3-209ENST00000446764 ITGB4P16144 1822 aa27.8■■■□□ 2.04
GARNL3-209ENST00000446764 LOC102724428A0A0B4J2F2 783 aa27.79■■■□□ 2.04
GARNL3-209ENST00000446764 SIK1P57059 783 aa27.79■■■□□ 2.04
GARNL3-209ENST00000446764 SLC52A2Q9HAB3 445 aa27.78■■■□□ 2.04
GARNL3-209ENST00000446764 MAP3K5Q99683 1374 aa27.77■■■□□ 2.04
GARNL3-209ENST00000446764 GNAT3A8MTJ3 354 aa27.77■■■□□ 2.04
GARNL3-209ENST00000446764 HMGB2P26583 209 aaKnown RBP27.75■■■□□ 2.03
GARNL3-209ENST00000446764 IL17REQ8NFR9 667 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms