RNA–Protein interactions for RNA: ENST00000446271.5

GCA-205, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 691 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-205ENST00000446271 PCDH11XQ9BZA7 1347 aa19.7■□□□□ 0.74
GCA-205ENST00000446271 PCDH11YQ9BZA8 1340 aa19.7■□□□□ 0.74
GCA-205ENST00000446271 RGPD2P0DJD1 1756 aa19.7■□□□□ 0.74
GCA-205ENST00000446271 MEGF6O75095 1541 aa19.68■□□□□ 0.74
GCA-205ENST00000446271 BAG6P46379 1132 aa19.68■□□□□ 0.74
GCA-205ENST00000446271 AMOTQ4VCS5 1084 aa19.68■□□□□ 0.74
GCA-205ENST00000446271 FAM182BQ5T319 152 aa19.67■□□□□ 0.74
GCA-205ENST00000446271 DDX54Q8TDD1 881 aaKnown RBP19.67■□□□□ 0.74
GCA-205ENST00000446271 RGPD1P0DJD0 1748 aa19.66■□□□□ 0.74
GCA-205ENST00000446271 PLEKHO1Q53GL0 409 aaPredicted RBP19.66■□□□□ 0.74
GCA-205ENST00000446271 SULT6B1Q6IMI4 303 aa19.66■□□□□ 0.74
GCA-205ENST00000446271 BCL11BQ9C0K0 894 aaPredicted RBP19.66■□□□□ 0.74
GCA-205ENST00000446271 KDRP35968 1356 aa19.66■□□□□ 0.74
GCA-205ENST00000446271 MYBBP1AQ9BQG0 1328 aaKnown RBP19.65■□□□□ 0.74
GCA-205ENST00000446271 TRIM37O94972 964 aa19.64■□□□□ 0.73
GCA-205ENST00000446271 HSP90AB1P08238 724 aaKnown RBP19.63■□□□□ 0.73
GCA-205ENST00000446271 EP400Q96L91 3159 aa19.62■□□□□ 0.73
GCA-205ENST00000446271 U2SURPO15042 1029 aaKnown RBP19.62■□□□□ 0.73
GCA-205ENST00000446271 IFNL2Q8IZJ0 200 aa19.62■□□□□ 0.73
GCA-205ENST00000446271 COL3A1P02461 1466 aaPredicted RBP19.61■□□□□ 0.73
GCA-205ENST00000446271 PNNQ9H307 717 aaKnown RBP19.61■□□□□ 0.73
GCA-205ENST00000446271 PRKRIP1Q9H875 184 aaPredicted RBP19.61■□□□□ 0.73
GCA-205ENST00000446271 PKD1L3Q7Z443 1732 aa19.6■□□□□ 0.73
GCA-205ENST00000446271 APBA3O96018 575 aa19.6■□□□□ 0.73
GCA-205ENST00000446271 HMGB2P26583 209 aaKnown RBP19.6■□□□□ 0.73
GCA-205ENST00000446271 PLSCR1O15162 318 aa19.59■□□□□ 0.73
GCA-205ENST00000446271 NKX1-1Q15270 411 aaPredicted RBP19.59■□□□□ 0.73
GCA-205ENST00000446271 C1orf141Q5JVX7 400 aa19.59■□□□□ 0.73
GCA-205ENST00000446271 FCHSD2O94868 740 aa19.58■□□□□ 0.72
GCA-205ENST00000446271 NEFMP07197 916 aa19.58■□□□□ 0.72
GCA-205ENST00000446271 CYP27B1O15528 508 aa19.57■□□□□ 0.72
GCA-205ENST00000446271 ANP32CO43423 234 aa19.57■□□□□ 0.72
GCA-205ENST00000446271 U2AF1L5P0DN76 240 aaPredicted RBP19.57■□□□□ 0.72
GCA-205ENST00000446271 U2AF1Q01081 240 aaKnown RBP eCLIP19.57■□□□□ 0.72
GCA-205ENST00000446271 AEBP1Q8IUX7 1158 aa19.57■□□□□ 0.72
GCA-205ENST00000446271 SBF2Q86WG5 1849 aa19.57■□□□□ 0.72
GCA-205ENST00000446271 HMOX1P09601 288 aa19.56■□□□□ 0.72
GCA-205ENST00000446271 PHKG2P15735 406 aa19.56■□□□□ 0.72
GCA-205ENST00000446271 ZNF530Q6P9A1 599 aaPredicted RBP19.56■□□□□ 0.72
GCA-205ENST00000446271 ACSBG1Q96GR2 724 aa19.55■□□□□ 0.72
GCA-205ENST00000446271 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
GCA-205ENST00000446271 SHANK3Q9BYB0 1731 aa19.55■□□□□ 0.72
GCA-205ENST00000446271 NHSQ6T4R5 1651 aa19.55■□□□□ 0.72
GCA-205ENST00000446271 TNS1Q9HBL0 1735 aaKnown RBP19.54■□□□□ 0.72
GCA-205ENST00000446271 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
GCA-205ENST00000446271 GAS2L2Q8NHY3 880 aa19.54■□□□□ 0.72
GCA-205ENST00000446271 KAT6BQ8WYB5 2073 aa19.53■□□□□ 0.72
GCA-205ENST00000446271 PRIM1P49642 420 aaKnown RBP19.53■□□□□ 0.72
GCA-205ENST00000446271 DEFB132Q7Z7B7 95 aa19.53■□□□□ 0.72
GCA-205ENST00000446271 SYTL4Q96C24 671 aaPredicted RBP19.53■□□□□ 0.72
GCA-205ENST00000446271 CAMKK2Q96RR4 588 aa19.53■□□□□ 0.72
GCA-205ENST00000446271 ERVV-2B6SEH9 535 aa19.52■□□□□ 0.72
GCA-205ENST00000446271 EN1Q05925 392 aaPredicted RBP19.52■□□□□ 0.72
GCA-205ENST00000446271 KCNQ2O43526 872 aa19.51■□□□□ 0.71
GCA-205ENST00000446271 RSPH6AQ9H0K4 717 aa19.51■□□□□ 0.71
GCA-205ENST00000446271 RGPD3A6NKT7 1758 aaPredicted RBP19.51■□□□□ 0.71
GCA-205ENST00000446271 RGPD4Q7Z3J3 1758 aa19.51■□□□□ 0.71
GCA-205ENST00000446271 SMARCC1Q92922 1105 aaPredicted RBP19.5■□□□□ 0.71
GCA-205ENST00000446271 PRKAR2BP31323 418 aa19.49■□□□□ 0.71
GCA-205ENST00000446271 WDR43Q15061 677 aaKnown RBP eCLIP19.49■□□□□ 0.71
GCA-205ENST00000446271 TMOD3Q9NYL9 352 aa19.49■□□□□ 0.71
GCA-205ENST00000446271 EZH2Q15910 746 aaKnown RBP19.48■□□□□ 0.71
GCA-205ENST00000446271 NBPF14Q5TI25 921 aa19.48■□□□□ 0.71
GCA-205ENST00000446271 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
GCA-205ENST00000446271 SLC27A3Q5K4L6 730 aa19.47■□□□□ 0.71
GCA-205ENST00000446271 DOT1LQ8TEK3 1739 aa19.47■□□□□ 0.71
GCA-205ENST00000446271 MPRIPQ6WCQ1 1025 aa19.46■□□□□ 0.71
GCA-205ENST00000446271 GNAT3A8MTJ3 354 aa19.45■□□□□ 0.7
GCA-205ENST00000446271 CABP4P57796 275 aa19.45■□□□□ 0.7
GCA-205ENST00000446271 MAPK8IP3Q9UPT6 1336 aa19.45■□□□□ 0.7
GCA-205ENST00000446271 BTAF1O14981 1849 aa19.44■□□□□ 0.7
GCA-205ENST00000446271 HTATSF1O43719 755 aaKnown RBP19.44■□□□□ 0.7
GCA-205ENST00000446271 TXNRD1Q16881 649 aa19.44■□□□□ 0.7
GCA-205ENST00000446271 MAP3K5Q99683 1374 aa19.44■□□□□ 0.7
GCA-205ENST00000446271 PTF1AQ7RTS3 328 aa19.43■□□□□ 0.7
GCA-205ENST00000446271 PIGBQ92521 554 aa19.43■□□□□ 0.7
GCA-205ENST00000446271 RTF1Q92541 710 aaKnown RBP19.43■□□□□ 0.7
GCA-205ENST00000446271 RNMTO43148 476 aaKnown RBP19.41■□□□□ 0.7
GCA-205ENST00000446271 RREB1Q92766 1687 aa19.4■□□□□ 0.7
GCA-205ENST00000446271 PHACTR3Q96KR7 559 aa19.4■□□□□ 0.7
GCA-205ENST00000446271 PLEKHF1Q96S99 279 aa19.4■□□□□ 0.7
GCA-205ENST00000446271 KDM6AO15550 1401 aaPredicted RBP19.4■□□□□ 0.7
GCA-205ENST00000446271 ITGB4P16144 1822 aa19.39■□□□□ 0.7
GCA-205ENST00000446271 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.69
GCA-205ENST00000446271 PALLDQ8WX93 1383 aa19.39■□□□□ 0.69
GCA-205ENST00000446271 TEFQ10587 303 aa19.38■□□□□ 0.69
GCA-205ENST00000446271 PROM2Q8N271 834 aa19.38■□□□□ 0.69
GCA-205ENST00000446271 CCNL1Q9UK58 526 aaPredicted RBP19.38■□□□□ 0.69
GCA-205ENST00000446271 TOGARAM1Q9Y4F4 1720 aa19.38■□□□□ 0.69
GCA-205ENST00000446271 LMOD3Q0VAK6 560 aa19.37■□□□□ 0.69
GCA-205ENST00000446271 NFE2L2Q16236 605 aa19.37■□□□□ 0.69
GCA-205ENST00000446271 NFATC2IPQ8NCF5 419 aa19.37■□□□□ 0.69
GCA-205ENST00000446271 RUNDC1Q96C34 613 aa19.37■□□□□ 0.69
GCA-205ENST00000446271 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
GCA-205ENST00000446271 SCN11AQ9UI33 1791 aa19.37■□□□□ 0.69
GCA-205ENST00000446271 LGR6Q9HBX8 967 aa19.35■□□□□ 0.69
GCA-205ENST00000446271 MRS2Q9HD23 443 aa19.35■□□□□ 0.69
GCA-205ENST00000446271 ADAMTS8Q9UP79 889 aa19.35■□□□□ 0.69
GCA-205ENST00000446271 MRC1P22897 1456 aa19.35■□□□□ 0.69
GCA-205ENST00000446271 LY75O60449 1722 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms