RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 FRAT1Q92837 279 aaPredicted RBP13.39□□□□□ -0.27
CALD1-211ENST00000445569 KIAA0232Q92628 1395 aa13.39□□□□□ -0.27
CALD1-211ENST00000445569 MAP3K5Q99683 1374 aa13.39□□□□□ -0.27
CALD1-211ENST00000445569 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
CALD1-211ENST00000445569 GCP02774 474 aa13.38□□□□□ -0.27
CALD1-211ENST00000445569 FTSJ3Q8IY81 847 aaKnown RBP13.38□□□□□ -0.27
CALD1-211ENST00000445569 LRRC59Q96AG4 307 aaKnown RBP13.38□□□□□ -0.27
CALD1-211ENST00000445569 POTEAQ6S8J7 498 aa13.37□□□□□ -0.27
CALD1-211ENST00000445569 ARHGEF25Q86VW2 580 aa13.37□□□□□ -0.27
CALD1-211ENST00000445569 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
CALD1-211ENST00000445569 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
CALD1-211ENST00000445569 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
CALD1-211ENST00000445569 CRB1P82279 1406 aa13.37□□□□□ -0.27
CALD1-211ENST00000445569 ABCA3Q99758 1704 aa13.36□□□□□ -0.27
CALD1-211ENST00000445569 XPCQ01831 940 aaPredicted RBP13.36□□□□□ -0.27
CALD1-211ENST00000445569 LMOD2Q6P5Q4 547 aa13.36□□□□□ -0.27
CALD1-211ENST00000445569 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
CALD1-211ENST00000445569 DDX17Q92841 729 aaKnown RBP13.36□□□□□ -0.27
CALD1-211ENST00000445569 SOS1Q07889 1333 aaPredicted RBP13.36□□□□□ -0.27
CALD1-211ENST00000445569 AHDC1Q5TGY3 1603 aaPredicted RBP13.35□□□□□ -0.27
CALD1-211ENST00000445569 ATF7IPQ6VMQ6 1270 aa13.35□□□□□ -0.27
CALD1-211ENST00000445569 SSH1Q8WYL5 1049 aa13.35□□□□□ -0.27
CALD1-211ENST00000445569 CLUAP1Q96AJ1 413 aa13.35□□□□□ -0.27
CALD1-211ENST00000445569 THUMPD2Q9BTF0 503 aaKnown RBP13.35□□□□□ -0.27
CALD1-211ENST00000445569 BCL2L13Q9BXK5 485 aa13.35□□□□□ -0.27
CALD1-211ENST00000445569 CHMP4BQ9H444 224 aaKnown RBP13.35□□□□□ -0.27
CALD1-211ENST00000445569 KDM2BQ8NHM5 1336 aa13.35□□□□□ -0.27
CALD1-211ENST00000445569 CPDO75976 1380 aa13.34□□□□□ -0.27
CALD1-211ENST00000445569 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
CALD1-211ENST00000445569 MVPQ14764 893 aaKnown RBP13.34□□□□□ -0.27
CALD1-211ENST00000445569 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
CALD1-211ENST00000445569 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
CALD1-211ENST00000445569 LTV1Q96GA3 475 aaPredicted RBP13.34□□□□□ -0.27
CALD1-211ENST00000445569 BABAM1Q9NWV8 329 aa13.34□□□□□ -0.27
CALD1-211ENST00000445569 COL18A1P39060 1754 aa13.34□□□□□ -0.27
CALD1-211ENST00000445569 COL16A1Q07092 1604 aaPredicted RBP13.34□□□□□ -0.27
CALD1-211ENST00000445569 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
CALD1-211ENST00000445569 RGPD5Q99666 1765 aa13.33□□□□□ -0.28
CALD1-211ENST00000445569 CHL1O00533 1208 aa13.33□□□□□ -0.28
CALD1-211ENST00000445569 TCERG1O14776 1098 aaKnown RBP13.33□□□□□ -0.28
CALD1-211ENST00000445569 PANK1Q8TE04 598 aa13.33□□□□□ -0.28
CALD1-211ENST00000445569 ARHGAP45Q92619 1136 aa13.33□□□□□ -0.28
CALD1-211ENST00000445569 DDX19BQ9UMR2 479 aa13.33□□□□□ -0.28
CALD1-211ENST00000445569 SOS2Q07890 1332 aaPredicted RBP13.33□□□□□ -0.28
CALD1-211ENST00000445569 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
CALD1-211ENST00000445569 ZBTB7CA1YPR0 619 aa13.32□□□□□ -0.28
CALD1-211ENST00000445569 FAM83GA6ND36 823 aa13.32□□□□□ -0.28
CALD1-211ENST00000445569 NUTM2BA6NNL0 878 aaPredicted RBP13.32□□□□□ -0.28
CALD1-211ENST00000445569 NUTM2EB1AL46 878 aaPredicted RBP13.32□□□□□ -0.28
CALD1-211ENST00000445569 AMOTQ4VCS5 1084 aa13.32□□□□□ -0.28
CALD1-211ENST00000445569 MEX3CQ5U5Q3 659 aaKnown RBP13.32□□□□□ -0.28
CALD1-211ENST00000445569 NUTM2AQ8IVF1 878 aaPredicted RBP13.32□□□□□ -0.28
CALD1-211ENST00000445569 COG6Q9Y2V7 657 aa13.32□□□□□ -0.28
CALD1-211ENST00000445569 ERBB3P21860 1342 aa13.32□□□□□ -0.28
CALD1-211ENST00000445569 VIRMAQ69YN4 1812 aaKnown RBP13.32□□□□□ -0.28
CALD1-211ENST00000445569 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
CALD1-211ENST00000445569 PARP4Q9UKK3 1724 aaKnown RBP13.31□□□□□ -0.28
CALD1-211ENST00000445569 TRIM27P14373 513 aa13.31□□□□□ -0.28
CALD1-211ENST00000445569 MCM10Q7L590 875 aa13.31□□□□□ -0.28
CALD1-211ENST00000445569 ANKRD24Q8TF21 1146 aa13.31□□□□□ -0.28
CALD1-211ENST00000445569 API5Q9BZZ5 524 aaKnown RBP13.31□□□□□ -0.28
CALD1-211ENST00000445569 LRP6O75581 1613 aa13.31□□□□□ -0.28
CALD1-211ENST00000445569 CACNA1FO60840 1977 aa13.31□□□□□ -0.28
CALD1-211ENST00000445569 PKD1L3Q7Z443 1732 aa13.3□□□□□ -0.28
CALD1-211ENST00000445569 VAMP4O75379 141 aa13.3□□□□□ -0.28
CALD1-211ENST00000445569 DCTN1Q14203 1278 aa13.3□□□□□ -0.28
CALD1-211ENST00000445569 PLEKHO1Q53GL0 409 aaPredicted RBP13.3□□□□□ -0.28
CALD1-211ENST00000445569 ZNF772Q68DY9 489 aaPredicted RBP13.3□□□□□ -0.28
CALD1-211ENST00000445569 CHMP4AQ9BY43 222 aa13.3□□□□□ -0.28
CALD1-211ENST00000445569 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
CALD1-211ENST00000445569 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
CALD1-211ENST00000445569 MSH5O43196 834 aa13.29□□□□□ -0.28
CALD1-211ENST00000445569 RLBP1P12271 317 aa13.29□□□□□ -0.28
CALD1-211ENST00000445569 NBPF6Q5VWK0 638 aa13.29□□□□□ -0.28
CALD1-211ENST00000445569 NBPF4Q96M43 638 aa13.29□□□□□ -0.28
CALD1-211ENST00000445569 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
CALD1-211ENST00000445569 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
CALD1-211ENST00000445569 ITPRIPQ8IWB1 547 aa13.28□□□□□ -0.28
CALD1-211ENST00000445569 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
CALD1-211ENST00000445569 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
CALD1-211ENST00000445569 ABCC4O15439 1325 aa13.28□□□□□ -0.28
CALD1-211ENST00000445569 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.29
CALD1-211ENST00000445569 C1orf141Q5JVX7 400 aa13.27□□□□□ -0.29
CALD1-211ENST00000445569 ZNF530Q6P9A1 599 aaPredicted RBP13.27□□□□□ -0.29
CALD1-211ENST00000445569 USHBP1Q8N6Y0 703 aa13.27□□□□□ -0.29
CALD1-211ENST00000445569 C8orf58Q8NAV2 365 aa13.27□□□□□ -0.29
CALD1-211ENST00000445569 PTPRCP08575 1304 aa13.27□□□□□ -0.29
CALD1-211ENST00000445569 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.29
CALD1-211ENST00000445569 TSPYL6Q8N831 410 aa13.26□□□□□ -0.29
CALD1-211ENST00000445569 RWDD1Q9H446 243 aaPredicted RBP13.26□□□□□ -0.29
CALD1-211ENST00000445569 SCN11AQ9UI33 1791 aa13.25□□□□□ -0.29
CALD1-211ENST00000445569 COL22A1Q8NFW1 1626 aaPredicted RBP13.25□□□□□ -0.29
CALD1-211ENST00000445569 RAPGEF4Q8WZA2 1011 aa13.25□□□□□ -0.29
CALD1-211ENST00000445569 PXDNLA1KZ92 1463 aa13.24□□□□□ -0.29
CALD1-211ENST00000445569 AFF2P51816 1311 aa13.24□□□□□ -0.29
CALD1-211ENST00000445569 ZC3H6P61129 1189 aaKnown RBP13.24□□□□□ -0.29
CALD1-211ENST00000445569 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
CALD1-211ENST00000445569 MRC1P22897 1456 aa13.23□□□□□ -0.29
CALD1-211ENST00000445569 ADAMTS2O95450 1211 aa13.23□□□□□ -0.29
CALD1-211ENST00000445569 HOXB7P09629 217 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms