RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 INSRP06213 1382 aa10.27□□□□□ -0.76
BRAFP1-201ENST00000445336 DICER1Q9UPY3 1922 aaKnown RBP10.27□□□□□ -0.76
BRAFP1-201ENST00000445336 DCAF5Q96JK2 942 aa10.27□□□□□ -0.77
BRAFP1-201ENST00000445336 CFAP44Q96MT7 982 aa10.27□□□□□ -0.77
BRAFP1-201ENST00000445336 TAF1LQ8IZX4 1826 aa10.26□□□□□ -0.77
BRAFP1-201ENST00000445336 DEFB115Q30KQ5 88 aa10.26□□□□□ -0.77
BRAFP1-201ENST00000445336 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
BRAFP1-201ENST00000445336 ARHGAP27Q6ZUM4 889 aa10.25□□□□□ -0.77
BRAFP1-201ENST00000445336 COL23A1Q86Y22 540 aaPredicted RBP10.25□□□□□ -0.77
BRAFP1-201ENST00000445336 PRR36Q9H6K5 1346 aa10.25□□□□□ -0.77
BRAFP1-201ENST00000445336 SNX27Q96L92 541 aa10.25□□□□□ -0.77
BRAFP1-201ENST00000445336 ANKRD50Q9ULJ7 1429 aa10.24□□□□□ -0.77
BRAFP1-201ENST00000445336 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
BRAFP1-201ENST00000445336 PKN2Q16513 984 aaKnown RBP10.24□□□□□ -0.77
BRAFP1-201ENST00000445336 N4BP2Q86UW6 1770 aaPredicted RBP10.24□□□□□ -0.77
BRAFP1-201ENST00000445336 RRP7BPQ9NSQ0 103 aa10.24□□□□□ -0.77
BRAFP1-201ENST00000445336 LDHDQ86WU2 507 aa10.23□□□□□ -0.77
BRAFP1-201ENST00000445336 EXOC5O00471 708 aa10.22□□□□□ -0.77
BRAFP1-201ENST00000445336 CARD10Q9BWT7 1032 aa10.22□□□□□ -0.77
BRAFP1-201ENST00000445336 SAGE1Q9NXZ1 904 aa10.22□□□□□ -0.77
BRAFP1-201ENST00000445336 UBR3Q6ZT12 1888 aa10.22□□□□□ -0.77
BRAFP1-201ENST00000445336 HHIPL1Q96JK4 782 aa10.22□□□□□ -0.77
BRAFP1-201ENST00000445336 WDR17Q8IZU2 1322 aa10.22□□□□□ -0.77
BRAFP1-201ENST00000445336 HIRIP3Q9BW71 556 aaPredicted RBP10.21□□□□□ -0.77
BRAFP1-201ENST00000445336 GPR153Q6NV75 609 aa10.21□□□□□ -0.78
BRAFP1-201ENST00000445336 RNF181Q9P0P0 153 aa10.21□□□□□ -0.78
BRAFP1-201ENST00000445336 TOGARAM1Q9Y4F4 1720 aa10.2□□□□□ -0.78
BRAFP1-201ENST00000445336 BRPF1P55201 1214 aaPredicted RBP10.2□□□□□ -0.78
BRAFP1-201ENST00000445336 FAM122AQ96E09 287 aa10.2□□□□□ -0.78
BRAFP1-201ENST00000445336 USP35Q9P2H5 1018 aa10.2□□□□□ -0.78
BRAFP1-201ENST00000445336 ZNF326Q5BKZ1 582 aaKnown RBP10.2□□□□□ -0.78
BRAFP1-201ENST00000445336 CHRNA2Q15822 529 aa10.19□□□□□ -0.78
BRAFP1-201ENST00000445336 PPIP5K1Q6PFW1 1433 aa10.19□□□□□ -0.78
BRAFP1-201ENST00000445336 TNRC18O15417 2968 aaPredicted RBP10.19□□□□□ -0.78
BRAFP1-201ENST00000445336 TRPM7Q96QT4 1865 aa10.18□□□□□ -0.78
BRAFP1-201ENST00000445336 C4AP0C0L4 1744 aa10.18□□□□□ -0.78
BRAFP1-201ENST00000445336 SOX10P56693 466 aa10.18□□□□□ -0.78
BRAFP1-201ENST00000445336 POLR3AO14802 1390 aaPredicted RBP10.17□□□□□ -0.78
BRAFP1-201ENST00000445336 DLEC1Q9Y238 1755 aa10.17□□□□□ -0.78
BRAFP1-201ENST00000445336 A0A1W2PPC1 479 aa10.17□□□□□ -0.78
BRAFP1-201ENST00000445336 ANKRD13DQ6ZTN6 518 aa10.17□□□□□ -0.78
BRAFP1-201ENST00000445336 POTECB2RU33 542 aa10.17□□□□□ -0.78
BRAFP1-201ENST00000445336 PPEF1O14829 653 aaPredicted RBP10.17□□□□□ -0.78
BRAFP1-201ENST00000445336 LMNB1P20700 586 aa10.16□□□□□ -0.78
BRAFP1-201ENST00000445336 BCS1LQ9Y276 419 aa10.16□□□□□ -0.78
BRAFP1-201ENST00000445336 C4BP0C0L5 1744 aa10.16□□□□□ -0.78
BRAFP1-201ENST00000445336 VPS8Q8N3P4 1428 aa10.16□□□□□ -0.78
BRAFP1-201ENST00000445336 COL25A1Q9BXS0 654 aaPredicted RBP10.15□□□□□ -0.78
BRAFP1-201ENST00000445336 DPY19L2Q6NUT2 758 aa10.15□□□□□ -0.78
BRAFP1-201ENST00000445336 IQCA1LA6NCM1 817 aa10.14□□□□□ -0.79
BRAFP1-201ENST00000445336 FCHSD2O94868 740 aa10.14□□□□□ -0.79
BRAFP1-201ENST00000445336 ITGBL1O95965 494 aaPredicted RBP10.14□□□□□ -0.79
BRAFP1-201ENST00000445336 ANKRD36BQ8N2N9 1353 aa10.14□□□□□ -0.79
BRAFP1-201ENST00000445336 PLEKHH1Q9ULM0 1364 aa10.14□□□□□ -0.79
BRAFP1-201ENST00000445336 FAM208AQ9UK61 1670 aaKnown RBP10.13□□□□□ -0.79
BRAFP1-201ENST00000445336 CTU1Q7Z7A3 348 aaKnown RBP10.13□□□□□ -0.79
BRAFP1-201ENST00000445336 ERBB4Q15303 1308 aa10.13□□□□□ -0.79
BRAFP1-201ENST00000445336 SSFA2P28290 1259 aa10.13□□□□□ -0.79
BRAFP1-201ENST00000445336 SMG6Q86US8 1419 aaKnown RBP10.12□□□□□ -0.79
BRAFP1-201ENST00000445336 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
BRAFP1-201ENST00000445336 LAMB4A4D0S4 1761 aa10.12□□□□□ -0.79
BRAFP1-201ENST00000445336 COL9A1P20849 921 aa10.12□□□□□ -0.79
BRAFP1-201ENST00000445336 CAPNS2Q96L46 248 aa10.12□□□□□ -0.79
BRAFP1-201ENST00000445336 CCDC87Q9NVE4 849 aa10.12□□□□□ -0.79
BRAFP1-201ENST00000445336 PIM2Q9P1W9 311 aa10.12□□□□□ -0.79
BRAFP1-201ENST00000445336 ZNF831Q5JPB2 1677 aa10.11□□□□□ -0.79
BRAFP1-201ENST00000445336 CASP8AP2Q9UKL3 1982 aa10.11□□□□□ -0.79
BRAFP1-201ENST00000445336 DOT1LQ8TEK3 1739 aa10.11□□□□□ -0.79
BRAFP1-201ENST00000445336 ZC3H6P61129 1189 aaKnown RBP10.1□□□□□ -0.79
BRAFP1-201ENST00000445336 KAT6BQ8WYB5 2073 aa10.1□□□□□ -0.79
BRAFP1-201ENST00000445336 DALRD3Q5D0E6 543 aaKnown RBP10.1□□□□□ -0.79
BRAFP1-201ENST00000445336 TOM1L2Q6ZVM7 507 aa10.1□□□□□ -0.79
BRAFP1-201ENST00000445336 STXBP5LQ9Y2K9 1186 aa10.1□□□□□ -0.79
BRAFP1-201ENST00000445336 NSD2O96028 1365 aa10.1□□□□□ -0.79
BRAFP1-201ENST00000445336 WAPLQ7Z5K2 1190 aa10.09□□□□□ -0.79
BRAFP1-201ENST00000445336 NLRP13Q86W25 1043 aa10.09□□□□□ -0.79
BRAFP1-201ENST00000445336 GPR101Q96P66 508 aaPredicted RBP10.09□□□□□ -0.79
BRAFP1-201ENST00000445336 ZNF219Q9P2Y4 722 aaPredicted RBP10.09□□□□□ -0.79
BRAFP1-201ENST00000445336 REM2Q8IYK8 340 aaPredicted RBP10.08□□□□□ -0.8
BRAFP1-201ENST00000445336 ROCK1Q13464 1354 aa10.08□□□□□ -0.8
BRAFP1-201ENST00000445336 NUTM2FA1L443 756 aa10.08□□□□□ -0.8
BRAFP1-201ENST00000445336 CCNL1Q9UK58 526 aaPredicted RBP10.08□□□□□ -0.8
BRAFP1-201ENST00000445336 MSH5O43196 834 aa10.07□□□□□ -0.8
BRAFP1-201ENST00000445336 NOM1Q5C9Z4 860 aaKnown RBP10.07□□□□□ -0.8
BRAFP1-201ENST00000445336 MSL1Q68DK7 614 aa10.07□□□□□ -0.8
BRAFP1-201ENST00000445336 INTS3Q68E01 1043 aaKnown RBP10.07□□□□□ -0.8
BRAFP1-201ENST00000445336 CCDC88AQ3V6T2 1871 aa10.07□□□□□ -0.8
BRAFP1-201ENST00000445336 PIK3C2GO75747 1445 aa10.07□□□□□ -0.8
BRAFP1-201ENST00000445336 LTBP3Q9NS15 1303 aa10.07□□□□□ -0.8
BRAFP1-201ENST00000445336 TLL2Q9Y6L7 1015 aa10.07□□□□□ -0.8
BRAFP1-201ENST00000445336 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
BRAFP1-201ENST00000445336 OTUD5Q96G74 571 aa10.06□□□□□ -0.8
BRAFP1-201ENST00000445336 KCNA3P22001 575 aa10.06□□□□□ -0.8
BRAFP1-201ENST00000445336 HPS5Q9UPZ3 1129 aa10.06□□□□□ -0.8
BRAFP1-201ENST00000445336 COLQQ9Y215 455 aaPredicted RBP10.06□□□□□ -0.8
BRAFP1-201ENST00000445336 DPEP1P16444 411 aa10.05□□□□□ -0.8
BRAFP1-201ENST00000445336 SYMPKQ92797 1274 aaKnown RBP10.05□□□□□ -0.8
BRAFP1-201ENST00000445336 GCP02774 474 aa10.05□□□□□ -0.8
BRAFP1-201ENST00000445336 MINK1Q8N4C8 1332 aaPredicted RBP10.04□□□□□ -0.8
BRAFP1-201ENST00000445336 PNMA8AQ86V59 439 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms