RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 DEFB132Q7Z7B7 95 aa23.54■■□□□ 1.36
SMARCAL1-209ENST00000444508 DIAPH1O60610 1272 aaKnown RBP23.53■■□□□ 1.36
SMARCAL1-209ENST00000444508 PPP2R1AP30153 589 aa23.53■■□□□ 1.36
SMARCAL1-209ENST00000444508 CFAP53Q96M91 514 aa23.53■■□□□ 1.36
SMARCAL1-209ENST00000444508 SHANK3Q9BYB0 1731 aa23.53■■□□□ 1.36
SMARCAL1-209ENST00000444508 ZNF316A6NFI3 1004 aaPredicted RBP23.52■■□□□ 1.36
SMARCAL1-209ENST00000444508 APBA3O96018 575 aa23.52■■□□□ 1.36
SMARCAL1-209ENST00000444508 PCDH11XQ9BZA7 1347 aa23.52■■□□□ 1.36
SMARCAL1-209ENST00000444508 PCDH11YQ9BZA8 1340 aa23.52■■□□□ 1.36
SMARCAL1-209ENST00000444508 BCL11BQ9C0K0 894 aaPredicted RBP23.51■■□□□ 1.35
SMARCAL1-209ENST00000444508 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
SMARCAL1-209ENST00000444508 PARD3Q8TEW0 1356 aa23.51■■□□□ 1.35
SMARCAL1-209ENST00000444508 PKD1L3Q7Z443 1732 aa23.5■■□□□ 1.35
SMARCAL1-209ENST00000444508 SULT6B1Q6IMI4 303 aa23.49■■□□□ 1.35
SMARCAL1-209ENST00000444508 PLEKHG2Q9H7P9 1386 aa23.49■■□□□ 1.35
SMARCAL1-209ENST00000444508 EN1Q05925 392 aaPredicted RBP23.48■■□□□ 1.35
SMARCAL1-209ENST00000444508 ACSBG1Q96GR2 724 aa23.48■■□□□ 1.35
SMARCAL1-209ENST00000444508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.48■■□□□ 1.352e-6■□□□□ 9.5
SMARCAL1-209ENST00000444508 COL3A1P02461 1466 aaPredicted RBP23.48■■□□□ 1.35
SMARCAL1-209ENST00000444508 NHSQ6T4R5 1651 aa23.48■■□□□ 1.35
SMARCAL1-209ENST00000444508 KAT6BQ8WYB5 2073 aa23.47■■□□□ 1.35
SMARCAL1-209ENST00000444508 RALBP1Q15311 655 aa23.47■■□□□ 1.35
SMARCAL1-209ENST00000444508 AEBP1Q8IUX7 1158 aa23.47■■□□□ 1.35
SMARCAL1-209ENST00000444508 KDRP35968 1356 aa23.46■■□□□ 1.35
SMARCAL1-209ENST00000444508 U2SURPO15042 1029 aaKnown RBP23.44■■□□□ 1.34
SMARCAL1-209ENST00000444508 CYP27B1O15528 508 aa23.44■■□□□ 1.34
SMARCAL1-209ENST00000444508 KCNQ2O43526 872 aa23.44■■□□□ 1.34
SMARCAL1-209ENST00000444508 PLEKHO1Q53GL0 409 aaPredicted RBP23.44■■□□□ 1.34
SMARCAL1-209ENST00000444508 PTF1AQ7RTS3 328 aa23.44■■□□□ 1.34
SMARCAL1-209ENST00000444508 DOT1LQ8TEK3 1739 aa23.44■■□□□ 1.34
SMARCAL1-209ENST00000444508 NUDCQ9Y266 331 aa23.43■■□□□ 1.34
SMARCAL1-209ENST00000444508 HMOX1P09601 288 aa23.42■■□□□ 1.34
SMARCAL1-209ENST00000444508 EZH2Q15910 746 aaKnown RBP23.42■■□□□ 1.34
SMARCAL1-209ENST00000444508 AMOTQ4VCS5 1084 aa23.42■■□□□ 1.34
SMARCAL1-209ENST00000444508 SYTL4Q96C24 671 aaPredicted RBP23.42■■□□□ 1.34
SMARCAL1-209ENST00000444508 CAMKK2Q96RR4 588 aa23.42■■□□□ 1.34
SMARCAL1-209ENST00000444508 IFNL2Q8IZJ0 200 aa23.41■■□□□ 1.34
SMARCAL1-209ENST00000444508 RGPD3A6NKT7 1758 aaPredicted RBP23.4■■□□□ 1.34
SMARCAL1-209ENST00000444508 RGPD4Q7Z3J3 1758 aa23.4■■□□□ 1.34
SMARCAL1-209ENST00000444508 PLSCR1O15162 318 aa23.4■■□□□ 1.34
SMARCAL1-209ENST00000444508 BTAF1O14981 1849 aa23.39■■□□□ 1.33
SMARCAL1-209ENST00000444508 PHKG2P15735 406 aa23.39■■□□□ 1.33
SMARCAL1-209ENST00000444508 PRIM1P49642 420 aaKnown RBP23.39■■□□□ 1.33
SMARCAL1-209ENST00000444508 NKX1-1Q15270 411 aaPredicted RBP23.38■■□□□ 1.33
SMARCAL1-209ENST00000444508 ZNF530Q6P9A1 599 aaPredicted RBP23.38■■□□□ 1.33
SMARCAL1-209ENST00000444508 MYBBP1AQ9BQG0 1328 aaKnown RBP23.36■■□□□ 1.33
SMARCAL1-209ENST00000444508 RREB1Q92766 1687 aa23.36■■□□□ 1.33
SMARCAL1-209ENST00000444508 C1orf141Q5JVX7 400 aa23.36■■□□□ 1.33
SMARCAL1-209ENST00000444508 HSP90AB1P08238 724 aaKnown RBP23.35■■□□□ 1.33
SMARCAL1-209ENST00000444508 U2AF1L5P0DN76 240 aaPredicted RBP23.34■■□□□ 1.33
SMARCAL1-209ENST00000444508 U2AF1Q01081 240 aaKnown RBP eCLIP23.34■■□□□ 1.33
SMARCAL1-209ENST00000444508 TOGARAM1Q9Y4F4 1720 aa23.33■■□□□ 1.33
SMARCAL1-209ENST00000444508 PRKRIP1Q9H875 184 aaPredicted RBP23.33■■□□□ 1.33
SMARCAL1-209ENST00000444508 MPRIPQ6WCQ1 1025 aa23.32■■□□□ 1.32
SMARCAL1-209ENST00000444508 NUP188Q5SRE5 1749 aa23.32■■□□□ 1.32
SMARCAL1-209ENST00000444508 ITGB4P16144 1822 aa23.31■■□□□ 1.32
SMARCAL1-209ENST00000444508 DCAF5Q96JK2 942 aa23.31■■□□□ 1.32
SMARCAL1-209ENST00000444508 TXNRD1Q16881 649 aa23.3■■□□□ 1.32
SMARCAL1-209ENST00000444508 NBPF14Q5TI25 921 aa23.3■■□□□ 1.32
SMARCAL1-209ENST00000444508 PRKAR2BP31323 418 aa23.29■■□□□ 1.32
SMARCAL1-209ENST00000444508 AKAP4Q5JQC9 854 aa23.29■■□□□ 1.32
SMARCAL1-209ENST00000444508 TMOD3Q9NYL9 352 aa23.29■■□□□ 1.32
SMARCAL1-209ENST00000444508 FCHSD2O94868 740 aa23.28■■□□□ 1.32
SMARCAL1-209ENST00000444508 MTHFSDQ2M296 383 aaKnown RBP23.28■■□□□ 1.32
SMARCAL1-209ENST00000444508 RSPH6AQ9H0K4 717 aa23.28■■□□□ 1.32
SMARCAL1-209ENST00000444508 ERVV-2B6SEH9 535 aa23.27■■□□□ 1.32
SMARCAL1-209ENST00000444508 PROM2Q8N271 834 aa23.27■■□□□ 1.32
SMARCAL1-209ENST00000444508 GAS2L2Q8NHY3 880 aa23.26■■□□□ 1.31
SMARCAL1-209ENST00000444508 PIGBQ92521 554 aa23.26■■□□□ 1.31
SMARCAL1-209ENST00000444508 KDM6AO15550 1401 aaPredicted RBP23.25■■□□□ 1.31
SMARCAL1-209ENST00000444508 SLC27A3Q5K4L6 730 aa23.24■■□□□ 1.31
SMARCAL1-209ENST00000444508 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
SMARCAL1-209ENST00000444508 LY75O60449 1722 aa23.23■■□□□ 1.31
SMARCAL1-209ENST00000444508 NEFMP07197 916 aa23.23■■□□□ 1.31
SMARCAL1-209ENST00000444508 CABP4P57796 275 aa23.23■■□□□ 1.31
SMARCAL1-209ENST00000444508 SCN11AQ9UI33 1791 aa23.22■■□□□ 1.31
SMARCAL1-209ENST00000444508 PSDA5PKW4 1024 aaPredicted RBP23.22■■□□□ 1.31
SMARCAL1-209ENST00000444508 R3HDM1Q15032 1099 aaKnown RBP23.22■■□□□ 1.31
SMARCAL1-209ENST00000444508 PHACTR3Q96KR7 559 aa23.22■■□□□ 1.31
SMARCAL1-209ENST00000444508 PALLDQ8WX93 1383 aa23.22■■□□□ 1.31
SMARCAL1-209ENST00000444508 ANP32CO43423 234 aa23.21■■□□□ 1.31
SMARCAL1-209ENST00000444508 PNNQ9H307 717 aaKnown RBP23.21■■□□□ 1.31
SMARCAL1-209ENST00000444508 MAP3K5Q99683 1374 aa23.2■■□□□ 1.3
SMARCAL1-209ENST00000444508 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
SMARCAL1-209ENST00000444508 CCNL1Q9UK58 526 aaPredicted RBP23.2■■□□□ 1.3
SMARCAL1-209ENST00000444508 STK32BQ9NY57 414 aa23.19■■□□□ 1.3
SMARCAL1-209ENST00000444508 VIRMAQ69YN4 1812 aaKnown RBP23.18■■□□□ 1.3
SMARCAL1-209ENST00000444508 RNMTO43148 476 aaKnown RBP23.18■■□□□ 1.3
SMARCAL1-209ENST00000444508 WDR43Q15061 677 aaKnown RBP eCLIP23.18■■□□□ 1.3
SMARCAL1-209ENST00000444508 ANO8Q9HCE9 1232 aaPredicted RBP23.18■■□□□ 1.3
SMARCAL1-209ENST00000444508 LRRC4BQ9NT99 713 aa23.18■■□□□ 1.3
SMARCAL1-209ENST00000444508 NFATC2IPQ8NCF5 419 aa23.17■■□□□ 1.3
SMARCAL1-209ENST00000444508 LGR6Q9HBX8 967 aa23.17■■□□□ 1.3
SMARCAL1-209ENST00000444508 ASAP1Q9ULH1 1129 aa23.17■■□□□ 1.3
SMARCAL1-209ENST00000444508 PAPPAQ13219 1627 aa23.16■■□□□ 1.3
SMARCAL1-209ENST00000444508 MAPK8IP3Q9UPT6 1336 aa23.16■■□□□ 1.3
SMARCAL1-209ENST00000444508 HMGB2P26583 209 aaKnown RBP23.16■■□□□ 1.3
SMARCAL1-209ENST00000444508 ADAMTS7Q9UKP4 1686 aa23.16■■□□□ 1.3
SMARCAL1-209ENST00000444508 KCNQ4P56696 695 aa23.15■■□□□ 1.3
SMARCAL1-209ENST00000444508 SLC52A2Q9HAB3 445 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms