RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 ARIH1Q9Y4X5 557 aaPredicted RBP15.84■□□□□ 0.13
LINC00475-208ENST00000444476 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
LINC00475-208ENST00000444476 CDC42BPGQ6DT37 1551 aa15.83■□□□□ 0.13
LINC00475-208ENST00000444476 HSPA1LP34931 641 aa15.83■□□□□ 0.12
LINC00475-208ENST00000444476 NEUROD1Q13562 356 aa15.83■□□□□ 0.12
LINC00475-208ENST00000444476 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.12
LINC00475-208ENST00000444476 NBPF26B4DH59 902 aa15.82■□□□□ 0.12
LINC00475-208ENST00000444476 MST1RQ04912 1400 aa15.82■□□□□ 0.12
LINC00475-208ENST00000444476 SOCS7O14512 581 aa15.81■□□□□ 0.12
LINC00475-208ENST00000444476 TONSLQ96HA7 1378 aa15.8■□□□□ 0.12
LINC00475-208ENST00000444476 POGKQ9P215 609 aa15.79■□□□□ 0.12
LINC00475-208ENST00000444476 GRXCR2A6NFK2 248 aa15.78■□□□□ 0.12
LINC00475-208ENST00000444476 SAMD7Q7Z3H4 446 aa15.78■□□□□ 0.12
LINC00475-208ENST00000444476 WAPLQ7Z5K2 1190 aa15.78■□□□□ 0.12
LINC00475-208ENST00000444476 PRAM1Q96QH2 718 aa15.78■□□□□ 0.12
LINC00475-208ENST00000444476 AHDC1Q5TGY3 1603 aaPredicted RBP15.78■□□□□ 0.12
LINC00475-208ENST00000444476 LAPTM4AQ15012 233 aa15.77■□□□□ 0.12
LINC00475-208ENST00000444476 Q6ZNB5 142 aa15.77■□□□□ 0.12
LINC00475-208ENST00000444476 TRAK1Q9UPV9 953 aa15.77■□□□□ 0.12
LINC00475-208ENST00000444476 C1orf167Q5SNV9 1468 aa15.77■□□□□ 0.11
LINC00475-208ENST00000444476 PLEKHH1Q9ULM0 1364 aa15.76■□□□□ 0.11
LINC00475-208ENST00000444476 ADGRB2O60241 1585 aa15.76■□□□□ 0.11
LINC00475-208ENST00000444476 BRINP3Q76B58 766 aa15.76■□□□□ 0.11
LINC00475-208ENST00000444476 TATDN2Q93075 761 aa15.76■□□□□ 0.11
LINC00475-208ENST00000444476 EIF3AQ14152 1382 aaKnown RBP15.75■□□□□ 0.11
LINC00475-208ENST00000444476 PHLPP1O60346 1717 aa15.75■□□□□ 0.11
LINC00475-208ENST00000444476 SMAPO00193 183 aa15.75■□□□□ 0.11
LINC00475-208ENST00000444476 RBM27Q9P2N5 1060 aaKnown RBP15.75■□□□□ 0.11
LINC00475-208ENST00000444476 PNMA3Q9UL41 463 aa15.75■□□□□ 0.11
LINC00475-208ENST00000444476 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
LINC00475-208ENST00000444476 ARHGEF28Q8N1W1 1705 aaKnown RBP15.74■□□□□ 0.11
LINC00475-208ENST00000444476 TRPM1Q7Z4N2 1603 aa15.74■□□□□ 0.11
LINC00475-208ENST00000444476 FMN2Q9NZ56 1722 aa15.74■□□□□ 0.11
LINC00475-208ENST00000444476 NHSL1Q5SYE7 1610 aa15.72■□□□□ 0.11
LINC00475-208ENST00000444476 ANKARQ7Z5J8 1434 aa15.72■□□□□ 0.11
LINC00475-208ENST00000444476 NECTIN2Q92692 538 aa15.72■□□□□ 0.11
LINC00475-208ENST00000444476 ROCK2O75116 1388 aaKnown RBP15.72■□□□□ 0.11
LINC00475-208ENST00000444476 COL16A1Q07092 1604 aaPredicted RBP15.72■□□□□ 0.11
LINC00475-208ENST00000444476 NBPF1Q3BBV0 1214 aa15.71■□□□□ 0.11
LINC00475-208ENST00000444476 TJAP1Q5JTD0 557 aa15.71■□□□□ 0.11
LINC00475-208ENST00000444476 FAM198AQ9UFP1 575 aa15.71■□□□□ 0.11
LINC00475-208ENST00000444476 JCADQ9P266 1359 aa15.71■□□□□ 0.11
LINC00475-208ENST00000444476 SAFB2Q14151 953 aaKnown RBP eCLIP15.7■□□□□ 0.1
LINC00475-208ENST00000444476 IL21Q9HBE4 155 aa15.7■□□□□ 0.1
LINC00475-208ENST00000444476 GPRASP1Q5JY77 1395 aa15.7■□□□□ 0.1
LINC00475-208ENST00000444476 CFAP44Q96MT7 982 aa15.69■□□□□ 0.1
LINC00475-208ENST00000444476 KIF1AQ12756 1690 aa15.69■□□□□ 0.1
LINC00475-208ENST00000444476 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
LINC00475-208ENST00000444476 RALGAPBQ86X10 1494 aa15.68■□□□□ 0.1
LINC00475-208ENST00000444476 OSBPP22059 807 aa15.68■□□□□ 0.1
LINC00475-208ENST00000444476 ESCO1Q5FWF5 840 aa15.68■□□□□ 0.1
LINC00475-208ENST00000444476 AMER1Q5JTC6 1135 aaPredicted RBP15.68■□□□□ 0.1
LINC00475-208ENST00000444476 PAXIP1Q6ZW49 1069 aaPredicted RBP15.68■□□□□ 0.1
LINC00475-208ENST00000444476 CENPJQ9HC77 1338 aaPredicted RBP15.68■□□□□ 0.1
LINC00475-208ENST00000444476 WASLO00401 505 aaPredicted RBP15.67■□□□□ 0.1
LINC00475-208ENST00000444476 PRIM1P49642 420 aaKnown RBP15.67■□□□□ 0.1
LINC00475-208ENST00000444476 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
LINC00475-208ENST00000444476 LRRC59Q96AG4 307 aaKnown RBP15.67■□□□□ 0.1
LINC00475-208ENST00000444476 ORAI2Q96SN7 254 aa15.67■□□□□ 0.1
LINC00475-208ENST00000444476 MINK1Q8N4C8 1332 aaPredicted RBP15.67■□□□□ 0.1
LINC00475-208ENST00000444476 NUDT18Q6ZVK8 323 aa15.66■□□□□ 0.1
LINC00475-208ENST00000444476 MTRQ99707 1265 aa15.66■□□□□ 0.1
LINC00475-208ENST00000444476 TULP4Q9NRJ4 1543 aa15.66■□□□□ 0.1
LINC00475-208ENST00000444476 SHPRHQ149N8 1683 aa15.66■□□□□ 0.1
LINC00475-208ENST00000444476 SOS2Q07890 1332 aaPredicted RBP15.66■□□□□ 0.1
LINC00475-208ENST00000444476 SPATA31A6Q5VVP1 1343 aa15.66■□□□□ 0.1
LINC00475-208ENST00000444476 NBPF8Q3BBV2 869 aa15.65■□□□□ 0.1
LINC00475-208ENST00000444476 MED1Q15648 1581 aaPredicted RBP15.65■□□□□ 0.1
LINC00475-208ENST00000444476 RNF40O75150 1001 aa15.64■□□□□ 0.09
LINC00475-208ENST00000444476 HIRIP3Q9BW71 556 aaPredicted RBP15.63■□□□□ 0.09
LINC00475-208ENST00000444476 CARD11Q9BXL7 1154 aa15.63■□□□□ 0.09
LINC00475-208ENST00000444476 CDHR5Q9HBB8 845 aa15.63■□□□□ 0.09
LINC00475-208ENST00000444476 QRICH2Q9H0J4 1663 aa15.63■□□□□ 0.09
LINC00475-208ENST00000444476 ITSN1Q15811 1721 aa15.63■□□□□ 0.09
LINC00475-208ENST00000444476 NUTM2FA1L443 756 aa15.62■□□□□ 0.09
LINC00475-208ENST00000444476 SLC4A3P48751 1232 aa15.62■□□□□ 0.09
LINC00475-208ENST00000444476 SBNO2Q9Y2G9 1366 aa15.62■□□□□ 0.09
LINC00475-208ENST00000444476 C3orf80F5H4A9 247 aa15.61■□□□□ 0.09
LINC00475-208ENST00000444476 RGPD8O14715 1765 aaPredicted RBP15.61■□□□□ 0.09
LINC00475-208ENST00000444476 USP32Q8NFA0 1604 aa15.61■□□□□ 0.09
LINC00475-208ENST00000444476 PXDNQ92626 1479 aa15.6■□□□□ 0.09
LINC00475-208ENST00000444476 FOXO3O43524 673 aa15.6■□□□□ 0.09
LINC00475-208ENST00000444476 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
LINC00475-208ENST00000444476 PSME1Q06323 249 aa15.6■□□□□ 0.09
LINC00475-208ENST00000444476 ATP7BP35670 1465 aa15.59■□□□□ 0.09
LINC00475-208ENST00000444476 GFRA3O60609 400 aa15.59■□□□□ 0.09
LINC00475-208ENST00000444476 SLF2Q8IX21 1173 aa15.59■□□□□ 0.09
LINC00475-208ENST00000444476 CDK19Q9BWU1 502 aa15.59■□□□□ 0.09
LINC00475-208ENST00000444476 PRKD2Q9BZL6 878 aa15.59■□□□□ 0.09
LINC00475-208ENST00000444476 V9GY48 417 aaPredicted RBP15.59■□□□□ 0.09
LINC00475-208ENST00000444476 EVC2Q86UK5 1308 aa15.59■□□□□ 0.09
LINC00475-208ENST00000444476 PNPLA6Q8IY17 1366 aa15.59■□□□□ 0.09
LINC00475-208ENST00000444476 PPP1R18Q6NYC8 613 aa15.58■□□□□ 0.08
LINC00475-208ENST00000444476 DDX17Q92841 729 aaKnown RBP15.58■□□□□ 0.08
LINC00475-208ENST00000444476 TTC13Q8NBP0 860 aa15.57■□□□□ 0.08
LINC00475-208ENST00000444476 NUDT16Q96DE0 195 aaKnown RBP15.57■□□□□ 0.08
LINC00475-208ENST00000444476 PRR36Q9H6K5 1346 aa15.57■□□□□ 0.08
LINC00475-208ENST00000444476 SBNO1A3KN83 1393 aa15.57■□□□□ 0.08
LINC00475-208ENST00000444476 SRPK2P78362 688 aaKnown RBP15.56■□□□□ 0.08
LINC00475-208ENST00000444476 KRT28Q7Z3Y7 464 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms