RNA–Protein interactions for RNA: ENST00000444179.5

SHC1-208, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-208ENST00000444179 PAPPAQ13219 1627 aa15.15■□□□□ 0.02
SHC1-208ENST00000444179 HSPA5P11021 654 aaKnown RBP15.15■□□□□ 0.02
SHC1-208ENST00000444179 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
SHC1-208ENST00000444179 BTAF1O14981 1849 aa15.15■□□□□ 0.02
SHC1-208ENST00000444179 FLT4P35916 1363 aa15.14■□□□□ 0.01
SHC1-208ENST00000444179 KCNQ4P56696 695 aa15.14■□□□□ 0.01
SHC1-208ENST00000444179 CCER1Q8TC90 406 aaPredicted RBP15.14■□□□□ 0.01
SHC1-208ENST00000444179 SHANK3Q9BYB0 1731 aa15.14■□□□□ 0.01
SHC1-208ENST00000444179 KIF20BQ96Q89 1820 aa15.13■□□□□ 0.01
SHC1-208ENST00000444179 AKT1S1Q96B36 256 aa15.13■□□□□ 0.01
SHC1-208ENST00000444179 SGIP1Q9BQI5 828 aa15.13■□□□□ 0.01
SHC1-208ENST00000444179 PPP1R1BQ9UD71 204 aaPredicted RBP15.13■□□□□ 0.01
SHC1-208ENST00000444179 KIF24Q5T7B8 1368 aa15.12■□□□□ 0.01
SHC1-208ENST00000444179 SYTL4Q96C24 671 aaPredicted RBP15.12■□□□□ 0.01
SHC1-208ENST00000444179 POLR3GLQ9BT43 218 aa15.12■□□□□ 0.01
SHC1-208ENST00000444179 UTRNP46939 3433 aa15.12■□□□□ 0.01
SHC1-208ENST00000444179 SMG6Q86US8 1419 aaKnown RBP15.11■□□□□ 0.01
SHC1-208ENST00000444179 EIF4G2P78344 907 aaKnown RBP eCLIP15.11■□□□□ 0.01
SHC1-208ENST00000444179 RAPGEF4Q8WZA2 1011 aa15.11■□□□□ 0.01
SHC1-208ENST00000444179 POLKQ9UBT6 870 aa15.11■□□□□ 0.01
SHC1-208ENST00000444179 CGNL1Q0VF96 1302 aa15.11■□□□□ 0.01
SHC1-208ENST00000444179 PPM1GO15355 546 aaPredicted RBP15.1■□□□□ 0.01
SHC1-208ENST00000444179 CYP27B1O15528 508 aa15.1■□□□□ 0.01
SHC1-208ENST00000444179 TATP17735 454 aaPredicted RBP15.1■□□□□ 0.01
SHC1-208ENST00000444179 SLC27A3Q5K4L6 730 aa15.1■□□□□ 0.01
SHC1-208ENST00000444179 WASHC2AQ641Q2 1341 aa15.1■□□□□ 0.01
SHC1-208ENST00000444179 NCAPD2Q15021 1401 aa15.09■□□□□ 0.01
SHC1-208ENST00000444179 MTFR1LQ9H019 292 aa15.09■□□□□ 0.01
SHC1-208ENST00000444179 DOT1LQ8TEK3 1739 aa15.09■□□□□ 0.01
SHC1-208ENST00000444179 EYA1Q99502 592 aa15.08■□□□□ 0
SHC1-208ENST00000444179 PANK3Q9H999 370 aa15.08■□□□□ 0
SHC1-208ENST00000444179 TNNT2P45379 298 aaPredicted RBP15.07■□□□□ 0
SHC1-208ENST00000444179 PNPLA7Q6ZV29 1317 aa15.07■□□□□ 0
SHC1-208ENST00000444179 FHDC1Q9C0D6 1143 aaPredicted RBP15.06■□□□□ 0
SHC1-208ENST00000444179 PCDH11XQ9BZA7 1347 aa15.06■□□□□ 0
SHC1-208ENST00000444179 PCDH11YQ9BZA8 1340 aa15.06■□□□□ 0
SHC1-208ENST00000444179 ANKRD26Q9UPS8 1709 aa15.06■□□□□ 0
SHC1-208ENST00000444179 EIF4A2Q14240 407 aaKnown RBP15.04■□□□□ -0
SHC1-208ENST00000444179 SYT17Q9BSW7 474 aa15.04■□□□□ -0
SHC1-208ENST00000444179 CCNL1Q9UK58 526 aaPredicted RBP15.04■□□□□ -0
SHC1-208ENST00000444179 LY75O60449 1722 aa15.03■□□□□ -0
SHC1-208ENST00000444179 NKX1-1Q15270 411 aaPredicted RBP15.03■□□□□ -0
SHC1-208ENST00000444179 MPRIPQ6WCQ1 1025 aa15.03■□□□□ -0
SHC1-208ENST00000444179 TFCP2L1Q9NZI6 479 aa15.03■□□□□ -0
SHC1-208ENST00000444179 PIGBQ92521 554 aa15.02■□□□□ -0
SHC1-208ENST00000444179 ARXQ96QS3 562 aa15.02■□□□□ -0
SHC1-208ENST00000444179 KAT6BQ8WYB5 2073 aa15.02□□□□□ -0.01
SHC1-208ENST00000444179 TOGARAM1Q9Y4F4 1720 aa15.01□□□□□ -0.01
SHC1-208ENST00000444179 GOLGB1Q14789 3259 aaKnown RBP15.01□□□□□ -0.01
SHC1-208ENST00000444179 PKD1L3Q7Z443 1732 aa15□□□□□ -0.01
SHC1-208ENST00000444179 COL23A1Q86Y22 540 aaPredicted RBP15□□□□□ -0.01
SHC1-208ENST00000444179 SLC16A10Q8TF71 515 aa15□□□□□ -0.01
SHC1-208ENST00000444179 PALLDQ8WX93 1383 aa14.99□□□□□ -0.01
SHC1-208ENST00000444179 MAP2P11137 1827 aaKnown RBP14.99□□□□□ -0.01
SHC1-208ENST00000444179 PHKG2P15735 406 aa14.99□□□□□ -0.01
SHC1-208ENST00000444179 AMIGO3Q86WK7 504 aa14.99□□□□□ -0.01
SHC1-208ENST00000444179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.011e-6■■■□□ 17.9
SHC1-208ENST00000444179 SPG7Q9UQ90 795 aa14.99□□□□□ -0.01
SHC1-208ENST00000444179 IGSF1Q8N6C5 1336 aa14.98□□□□□ -0.01
SHC1-208ENST00000444179 YY1P25490 414 aa14.98□□□□□ -0.01
SHC1-208ENST00000444179 TUBGCP6Q96RT7 1819 aa14.98□□□□□ -0.01
SHC1-208ENST00000444179 QSER1Q2KHR3 1735 aa14.97□□□□□ -0.01
SHC1-208ENST00000444179 KIF7Q2M1P5 1343 aa14.97□□□□□ -0.01
SHC1-208ENST00000444179 AMER1Q5JTC6 1135 aaPredicted RBP14.97□□□□□ -0.01
SHC1-208ENST00000444179 SMIM5Q71RC9 77 aa14.97□□□□□ -0.01
SHC1-208ENST00000444179 MORC1Q86VD1 984 aa14.97□□□□□ -0.01
SHC1-208ENST00000444179 MAP3K5Q99683 1374 aa14.97□□□□□ -0.01
SHC1-208ENST00000444179 AEBP1Q8IUX7 1158 aa14.96□□□□□ -0.01
SHC1-208ENST00000444179 ASAP1Q9ULH1 1129 aa14.96□□□□□ -0.01
SHC1-208ENST00000444179 COL24A1Q17RW2 1714 aa14.95□□□□□ -0.02
SHC1-208ENST00000444179 IFNL2Q8IZJ0 200 aa14.95□□□□□ -0.02
SHC1-208ENST00000444179 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
SHC1-208ENST00000444179 PER1O15534 1290 aaPredicted RBP14.94□□□□□ -0.02
SHC1-208ENST00000444179 MSH5O43196 834 aa14.94□□□□□ -0.02
SHC1-208ENST00000444179 MSL1Q68DK7 614 aa14.94□□□□□ -0.02
SHC1-208ENST00000444179 SMARCC1Q92922 1105 aaPredicted RBP14.94□□□□□ -0.02
SHC1-208ENST00000444179 ATG3Q9NT62 314 aa14.94□□□□□ -0.02
SHC1-208ENST00000444179 KNSTRNQ9Y448 316 aa14.94□□□□□ -0.02
SHC1-208ENST00000444179 POLD1P28340 1107 aa14.93□□□□□ -0.02
SHC1-208ENST00000444179 ITPK1Q13572 414 aa14.93□□□□□ -0.02
SHC1-208ENST00000444179 LINC00116Q8NCU8 138 aa14.93□□□□□ -0.02
SHC1-208ENST00000444179 NLGN2Q8NFZ4 835 aa14.93□□□□□ -0.02
SHC1-208ENST00000444179 TMOD3Q9NYL9 352 aa14.93□□□□□ -0.02
SHC1-208ENST00000444179 ITGB4P16144 1822 aa14.93□□□□□ -0.02
SHC1-208ENST00000444179 C5P01031 1676 aa14.93□□□□□ -0.02
SHC1-208ENST00000444179 LOC102724428A0A0B4J2F2 783 aa14.92□□□□□ -0.02
SHC1-208ENST00000444179 IL13P35225 146 aa14.92□□□□□ -0.02
SHC1-208ENST00000444179 SIK1P57059 783 aa14.92□□□□□ -0.02
SHC1-208ENST00000444179 SLC4A9Q96Q91 983 aa14.92□□□□□ -0.02
SHC1-208ENST00000444179 KLHL34Q8N239 644 aa14.91□□□□□ -0.02
SHC1-208ENST00000444179 PLEKHG2Q9H7P9 1386 aa14.9□□□□□ -0.02
SHC1-208ENST00000444179 C4BP0C0L5 1744 aa14.9□□□□□ -0.02
SHC1-208ENST00000444179 KDM6AO15550 1401 aaPredicted RBP14.9□□□□□ -0.02
SHC1-208ENST00000444179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.89□□□□□ -0.03
SHC1-208ENST00000444179 ERVV-2B6SEH9 535 aa14.89□□□□□ -0.03
SHC1-208ENST00000444179 PLEKHO1Q53GL0 409 aaPredicted RBP14.89□□□□□ -0.03
SHC1-208ENST00000444179 SULT6B1Q6IMI4 303 aa14.89□□□□□ -0.03
SHC1-208ENST00000444179 AK7Q96M32 723 aa14.89□□□□□ -0.03
SHC1-208ENST00000444179 TAF1LQ8IZX4 1826 aa14.89□□□□□ -0.03
SHC1-208ENST00000444179 KDRP35968 1356 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms