RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 KDRP35968 1356 aa17.47■□□□□ 0.39
PDLIM2-212ENST00000443561 RREB1Q92766 1687 aa17.47■□□□□ 0.39
PDLIM2-212ENST00000443561 BTAF1O14981 1849 aa17.47■□□□□ 0.39
PDLIM2-212ENST00000443561 VIRMAQ69YN4 1812 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-212ENST00000443561 ITGB4P16144 1822 aa17.45■□□□□ 0.38
PDLIM2-212ENST00000443561 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-212ENST00000443561 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
PDLIM2-212ENST00000443561 PDE3BQ13370 1112 aa17.44■□□□□ 0.38
PDLIM2-212ENST00000443561 EXOC5O00471 708 aa17.43■□□□□ 0.38
PDLIM2-212ENST00000443561 NUP188Q5SRE5 1749 aa17.43■□□□□ 0.38
PDLIM2-212ENST00000443561 FAM196AQ6ZSG2 479 aa17.42■□□□□ 0.38
PDLIM2-212ENST00000443561 DEFB132Q7Z7B7 95 aa17.42■□□□□ 0.38
PDLIM2-212ENST00000443561 CYP27B1O15528 508 aa17.41■□□□□ 0.38
PDLIM2-212ENST00000443561 TRIM37O94972 964 aa17.41■□□□□ 0.38
PDLIM2-212ENST00000443561 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-212ENST00000443561 ADAMTS7Q9UKP4 1686 aa17.39■□□□□ 0.37
PDLIM2-212ENST00000443561 KCNQ2O43526 872 aa17.39■□□□□ 0.37
PDLIM2-212ENST00000443561 TATP17735 454 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-212ENST00000443561 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
PDLIM2-212ENST00000443561 PLEKHG2Q9H7P9 1386 aa17.39■□□□□ 0.37
PDLIM2-212ENST00000443561 SCN11AQ9UI33 1791 aa17.38■□□□□ 0.37
PDLIM2-212ENST00000443561 KAT6BQ8WYB5 2073 aa17.38■□□□□ 0.37
PDLIM2-212ENST00000443561 DIAPH1O60610 1272 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-212ENST00000443561 SULT6B1Q6IMI4 303 aa17.37■□□□□ 0.37
PDLIM2-212ENST00000443561 DDX54Q8TDD1 881 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-212ENST00000443561 LY75O60449 1722 aa17.37■□□□□ 0.37
PDLIM2-212ENST00000443561 HMOX1P09601 288 aa17.36■□□□□ 0.37
PDLIM2-212ENST00000443561 ACSBG1Q96GR2 724 aa17.36■□□□□ 0.37
PDLIM2-212ENST00000443561 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
PDLIM2-212ENST00000443561 KDM6AO15550 1401 aaPredicted RBP17.36■□□□□ 0.37
PDLIM2-212ENST00000443561 CCDC125Q86Z20 511 aa17.35■□□□□ 0.37
PDLIM2-212ENST00000443561 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
PDLIM2-212ENST00000443561 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
PDLIM2-212ENST00000443561 PAPPAQ13219 1627 aa17.35■□□□□ 0.37
PDLIM2-212ENST00000443561 RALBP1Q15311 655 aa17.34■□□□□ 0.37
PDLIM2-212ENST00000443561 CAMKK2Q96RR4 588 aa17.34■□□□□ 0.37
PDLIM2-212ENST00000443561 DLG5Q8TDM6 1919 aa17.33■□□□□ 0.37
PDLIM2-212ENST00000443561 EN1Q05925 392 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-212ENST00000443561 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
PDLIM2-212ENST00000443561 MYBBP1AQ9BQG0 1328 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-212ENST00000443561 PHKG2P15735 406 aa17.32■□□□□ 0.36
PDLIM2-212ENST00000443561 NKX1-1Q15270 411 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-212ENST00000443561 EZH2Q15910 746 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-212ENST00000443561 BCL11BQ9C0K0 894 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-212ENST00000443561 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
PDLIM2-212ENST00000443561 SIPA1L3O60292 1781 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-212ENST00000443561 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-212ENST00000443561 APBA3O96018 575 aa17.3■□□□□ 0.36
PDLIM2-212ENST00000443561 PROM2Q8N271 834 aa17.3■□□□□ 0.36
PDLIM2-212ENST00000443561 TUBGCP6Q96RT7 1819 aa17.3■□□□□ 0.36
PDLIM2-212ENST00000443561 MRC1P22897 1456 aa17.3■□□□□ 0.36
PDLIM2-212ENST00000443561 TAF1LQ8IZX4 1826 aa17.29■□□□□ 0.36
PDLIM2-212ENST00000443561 CCDC184Q52MB2 194 aa17.29■□□□□ 0.36
PDLIM2-212ENST00000443561 SPG7Q9UQ90 795 aa17.29■□□□□ 0.36
PDLIM2-212ENST00000443561 BAG6P46379 1132 aa17.28■□□□□ 0.36
PDLIM2-212ENST00000443561 PRIM1P49642 420 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-212ENST00000443561 PHACTR3Q96KR7 559 aa17.28■□□□□ 0.36
PDLIM2-212ENST00000443561 CFAP53Q96M91 514 aa17.28■□□□□ 0.36
PDLIM2-212ENST00000443561 MTHFSDQ2M296 383 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-212ENST00000443561 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-212ENST00000443561 PLSCR1O15162 318 aa17.26■□□□□ 0.35
PDLIM2-212ENST00000443561 PLEKHO1Q53GL0 409 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-212ENST00000443561 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
PDLIM2-212ENST00000443561 SF3B2Q13435 895 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-212ENST00000443561 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
PDLIM2-212ENST00000443561 C5P01031 1676 aa17.24■□□□□ 0.35
PDLIM2-212ENST00000443561 AMOTQ4VCS5 1084 aa17.24■□□□□ 0.35
PDLIM2-212ENST00000443561 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
PDLIM2-212ENST00000443561 UBR2Q8IWV8 1755 aa17.23■□□□□ 0.35
PDLIM2-212ENST00000443561 U2AF1L5P0DN76 240 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-212ENST00000443561 U2AF1Q01081 240 aaKnown RBP eCLIP17.23■□□□□ 0.35
PDLIM2-212ENST00000443561 PIGBQ92521 554 aa17.23■□□□□ 0.35
PDLIM2-212ENST00000443561 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-212ENST00000443561 CASZ1Q86V15 1759 aa17.23■□□□□ 0.35
PDLIM2-212ENST00000443561 CICQ96RK0 1608 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-212ENST00000443561 LRRC4BQ9NT99 713 aa17.22■□□□□ 0.35
PDLIM2-212ENST00000443561 COL5A3P25940 1745 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-212ENST00000443561 TJP1Q07157 1748 aa17.21■□□□□ 0.35
PDLIM2-212ENST00000443561 ZNF831Q5JPB2 1677 aa17.21■□□□□ 0.35
PDLIM2-212ENST00000443561 MPRIPQ6WCQ1 1025 aa17.21■□□□□ 0.35
PDLIM2-212ENST00000443561 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-212ENST00000443561 LGR6Q9HBX8 967 aa17.21■□□□□ 0.35
PDLIM2-212ENST00000443561 QSER1Q2KHR3 1735 aa17.21■□□□□ 0.35
PDLIM2-212ENST00000443561 FCHSD2O94868 740 aa17.2■□□□□ 0.34
PDLIM2-212ENST00000443561 KCNQ4P56696 695 aa17.2■□□□□ 0.34
PDLIM2-212ENST00000443561 TXNRD1Q16881 649 aa17.2■□□□□ 0.34
PDLIM2-212ENST00000443561 AKAP4Q5JQC9 854 aa17.2■□□□□ 0.34
PDLIM2-212ENST00000443561 DCAF5Q96JK2 942 aa17.2■□□□□ 0.34
PDLIM2-212ENST00000443561 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
PDLIM2-212ENST00000443561 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
PDLIM2-212ENST00000443561 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
PDLIM2-212ENST00000443561 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
PDLIM2-212ENST00000443561 KCPQ6ZWJ8 1503 aa17.18■□□□□ 0.34
PDLIM2-212ENST00000443561 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-212ENST00000443561 IL17REQ8NFR9 667 aa17.17■□□□□ 0.34
PDLIM2-212ENST00000443561 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
PDLIM2-212ENST00000443561 UBR3Q6ZT12 1888 aa17.16■□□□□ 0.34
PDLIM2-212ENST00000443561 C4BP0C0L5 1744 aa17.16■□□□□ 0.34
PDLIM2-212ENST00000443561 ERVV-2B6SEH9 535 aa17.16■□□□□ 0.34
PDLIM2-212ENST00000443561 C1orf141Q5JVX7 400 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms