RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 KNSTRNQ9Y448 316 aa30.36■■■□□ 2.45
HDLBP-220ENST00000442730 R3HDM1Q15032 1099 aaKnown RBP30.35■■■□□ 2.45
HDLBP-220ENST00000442730 DDX54Q8TDD1 881 aaKnown RBP30.35■■■□□ 2.45
HDLBP-220ENST00000442730 ACSBG1Q96GR2 724 aa30.35■■■□□ 2.45
HDLBP-220ENST00000442730 ZCRB1Q8TBF4 217 aaKnown RBP30.34■■■□□ 2.45
HDLBP-220ENST00000442730 RAPGEF4Q8WZA2 1011 aa30.34■■■□□ 2.45
HDLBP-220ENST00000442730 AMER1Q5JTC6 1135 aaPredicted RBP30.32■■■□□ 2.44
HDLBP-220ENST00000442730 LRP5O75197 1615 aa30.31■■■□□ 2.44
HDLBP-220ENST00000442730 TATP17735 454 aaPredicted RBP30.3■■■□□ 2.44
HDLBP-220ENST00000442730 MORC1Q86VD1 984 aa30.3■■■□□ 2.44
HDLBP-220ENST00000442730 BTAF1O14981 1849 aa30.3■■■□□ 2.44
HDLBP-220ENST00000442730 DOT1LQ8TEK3 1739 aa30.3■■■□□ 2.44
HDLBP-220ENST00000442730 PROM2Q8N271 834 aa30.28■■■□□ 2.44
HDLBP-220ENST00000442730 PKD1L3Q7Z443 1732 aa30.27■■■□□ 2.44
HDLBP-220ENST00000442730 NBPF14Q5TI25 921 aa30.27■■■□□ 2.44
HDLBP-220ENST00000442730 EIF4A2Q14240 407 aaKnown RBP30.26■■■□□ 2.43
HDLBP-220ENST00000442730 EYA1Q99502 592 aa30.26■■■□□ 2.43
HDLBP-220ENST00000442730 PER1O15534 1290 aaPredicted RBP30.25■■■□□ 2.43
HDLBP-220ENST00000442730 PCDH11XQ9BZA7 1347 aa30.24■■■□□ 2.43
HDLBP-220ENST00000442730 PCDH11YQ9BZA8 1340 aa30.24■■■□□ 2.43
HDLBP-220ENST00000442730 TXNRD1Q16881 649 aa30.24■■■□□ 2.43
HDLBP-220ENST00000442730 ANO8Q9HCE9 1232 aaPredicted RBP30.23■■■□□ 2.43
HDLBP-220ENST00000442730 IGSF1Q8N6C5 1336 aa30.2■■■□□ 2.42
HDLBP-220ENST00000442730 PRIM1P49642 420 aaKnown RBP30.19■■■□□ 2.42
HDLBP-220ENST00000442730 PAPPAQ13219 1627 aa30.18■■■□□ 2.42
HDLBP-220ENST00000442730 CYP27B1O15528 508 aa30.18■■■□□ 2.42
HDLBP-220ENST00000442730 SYTL4Q96C24 671 aaPredicted RBP30.17■■■□□ 2.42
HDLBP-220ENST00000442730 NPC1L1Q9UHC9 1359 aa30.16■■■□□ 2.42
HDLBP-220ENST00000442730 PLEKHG2Q9H7P9 1386 aa30.15■■■□□ 2.42
HDLBP-220ENST00000442730 TOGARAM1Q9Y4F4 1720 aa30.15■■■□□ 2.42
HDLBP-220ENST00000442730 KAT6BQ8WYB5 2073 aa30.15■■■□□ 2.42
HDLBP-220ENST00000442730 CC2D1BQ5T0F9 858 aaKnown RBP30.14■■■□□ 2.42
HDLBP-220ENST00000442730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.13■■■□□ 2.41
HDLBP-220ENST00000442730 SPG7Q9UQ90 795 aa30.13■■■□□ 2.41
HDLBP-220ENST00000442730 CASZ1Q86V15 1759 aa30.13■■■□□ 2.41
HDLBP-220ENST00000442730 LY75O60449 1722 aa30.1■■■□□ 2.41
HDLBP-220ENST00000442730 LRRC4BQ9NT99 713 aa30.09■■■□□ 2.41
HDLBP-220ENST00000442730 STK32BQ9NY57 414 aa30.09■■■□□ 2.41
HDLBP-220ENST00000442730 NKX1-1Q15270 411 aaPredicted RBP30.08■■■□□ 2.41
HDLBP-220ENST00000442730 IL13P35225 146 aa30.07■■■□□ 2.4
HDLBP-220ENST00000442730 MTHFSP49914 203 aa30.07■■■□□ 2.4
HDLBP-220ENST00000442730 SLC15A2Q16348 729 aa30.07■■■□□ 2.4
HDLBP-220ENST00000442730 SLC27A3Q5K4L6 730 aa30.07■■■□□ 2.4
HDLBP-220ENST00000442730 AEBP1Q8IUX7 1158 aa30.06■■■□□ 2.4
HDLBP-220ENST00000442730 KDRP35968 1356 aa30.05■■■□□ 2.4
HDLBP-220ENST00000442730 PDGFDQ9GZP0 370 aaPredicted RBP30.04■■■□□ 2.4
HDLBP-220ENST00000442730 PHKG2P15735 406 aa30.03■■■□□ 2.4
HDLBP-220ENST00000442730 ITGB4P16144 1822 aa30.03■■■□□ 2.4
HDLBP-220ENST00000442730 ZNF827Q17R98 1081 aa30.02■■■□□ 2.4
HDLBP-220ENST00000442730 IFNL2Q8IZJ0 200 aa30.02■■■□□ 2.4
HDLBP-220ENST00000442730 MPRIPQ6WCQ1 1025 aa30.01■■■□□ 2.39
HDLBP-220ENST00000442730 COL3A1P02461 1466 aaPredicted RBP30■■■□□ 2.39
HDLBP-220ENST00000442730 CNGB1Q14028 1251 aaPredicted RBP30■■■□□ 2.39
HDLBP-220ENST00000442730 KCNQ4P56696 695 aa29.99■■■□□ 2.39
HDLBP-220ENST00000442730 SULT6B1Q6IMI4 303 aa29.99■■■□□ 2.39
HDLBP-220ENST00000442730 AKT1S1Q96B36 256 aa29.98■■■□□ 2.39
HDLBP-220ENST00000442730 SPON1Q9HCB6 807 aa29.98■■■□□ 2.39
HDLBP-220ENST00000442730 CCNL1Q9UK58 526 aaPredicted RBP29.98■■■□□ 2.39
HDLBP-220ENST00000442730 PALLDQ8WX93 1383 aa29.98■■■□□ 2.39
HDLBP-220ENST00000442730 PLEKHO1Q53GL0 409 aaPredicted RBP29.97■■■□□ 2.39
HDLBP-220ENST00000442730 PIGBQ92521 554 aa29.96■■■□□ 2.39
HDLBP-220ENST00000442730 AMOTQ4VCS5 1084 aa29.95■■■□□ 2.39
HDLBP-220ENST00000442730 QSER1Q2KHR3 1735 aa29.94■■■□□ 2.38
HDLBP-220ENST00000442730 ZNF530Q6P9A1 599 aaPredicted RBP29.94■■■□□ 2.38
HDLBP-220ENST00000442730 C5P01031 1676 aa29.93■■■□□ 2.38
HDLBP-220ENST00000442730 DIAPH1O60610 1272 aaKnown RBP29.93■■■□□ 2.38
HDLBP-220ENST00000442730 ZBTB7AO95365 584 aa29.93■■■□□ 2.38
HDLBP-220ENST00000442730 KDM6AO15550 1401 aaPredicted RBP29.93■■■□□ 2.38
HDLBP-220ENST00000442730 TUBGCP6Q96RT7 1819 aa29.92■■■□□ 2.38
HDLBP-220ENST00000442730 TMOD3Q9NYL9 352 aa29.92■■■□□ 2.38
HDLBP-220ENST00000442730 SMARCC1Q92922 1105 aaPredicted RBP29.91■■■□□ 2.38
HDLBP-220ENST00000442730 HSP90AB1P08238 724 aaKnown RBP29.9■■■□□ 2.38
HDLBP-220ENST00000442730 DCAF5Q96JK2 942 aa29.9■■■□□ 2.38
HDLBP-220ENST00000442730 HMOX1P09601 288 aa29.88■■■□□ 2.37
HDLBP-220ENST00000442730 PNPLA7Q6ZV29 1317 aa29.88■■■□□ 2.37
HDLBP-220ENST00000442730 MTFR1LQ9H019 292 aa29.87■■■□□ 2.37
HDLBP-220ENST00000442730 ERVV-2B6SEH9 535 aa29.86■■■□□ 2.37
HDLBP-220ENST00000442730 PTGER2P43116 358 aa29.86■■■□□ 2.37
HDLBP-220ENST00000442730 C1orf141Q5JVX7 400 aa29.86■■■□□ 2.37
HDLBP-220ENST00000442730 TFCP2L1Q9NZI6 479 aa29.86■■■□□ 2.37
HDLBP-220ENST00000442730 TAF1LQ8IZX4 1826 aa29.86■■■□□ 2.37
HDLBP-220ENST00000442730 ASAP1Q9ULH1 1129 aa29.85■■■□□ 2.37
HDLBP-220ENST00000442730 ATF5Q9Y2D1 282 aaPredicted RBP29.85■■■□□ 2.37
HDLBP-220ENST00000442730 PPP1R1BQ9UD71 204 aaPredicted RBP29.84■■■□□ 2.37
HDLBP-220ENST00000442730 PPP2R1AP30153 589 aa29.83■■■□□ 2.37
HDLBP-220ENST00000442730 C4BP0C0L5 1744 aa29.82■■■□□ 2.36
HDLBP-220ENST00000442730 ATG3Q9NT62 314 aa29.82■■■□□ 2.36
HDLBP-220ENST00000442730 LOC102724428A0A0B4J2F2 783 aa29.81■■■□□ 2.36
HDLBP-220ENST00000442730 SIK1P57059 783 aa29.81■■■□□ 2.36
HDLBP-220ENST00000442730 SGIP1Q9BQI5 828 aa29.81■■■□□ 2.36
HDLBP-220ENST00000442730 U2SURPO15042 1029 aaKnown RBP29.79■■■□□ 2.36
HDLBP-220ENST00000442730 CFAP53Q96M91 514 aa29.79■■■□□ 2.36
HDLBP-220ENST00000442730 SCN11AQ9UI33 1791 aa29.78■■■□□ 2.36
HDLBP-220ENST00000442730 HMGB2P26583 209 aaKnown RBP29.78■■■□□ 2.36
HDLBP-220ENST00000442730 AKAP4Q5JQC9 854 aa29.78■■■□□ 2.36
HDLBP-220ENST00000442730 CABP4P57796 275 aa29.77■■■□□ 2.36
HDLBP-220ENST00000442730 SLC16A10Q8TF71 515 aa29.77■■■□□ 2.36
HDLBP-220ENST00000442730 COL24A1Q17RW2 1714 aa29.76■■■□□ 2.36
HDLBP-220ENST00000442730 MRC1P22897 1456 aa29.76■■■□□ 2.35
HDLBP-220ENST00000442730 ADAMTS7Q9UKP4 1686 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms