RNA–Protein interactions for RNA: ENST00000442240.5

SUCLG1-203, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 5

Gene SUCLG1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-203ENST00000442240 DDX17Q92841 729 aaKnown RBP15.3■□□□□ 0.04
SUCLG1-203ENST00000442240 SMC4Q9NTJ3 1288 aa15.3■□□□□ 0.04
SUCLG1-203ENST00000442240 PLIN1O60240 522 aa15.29■□□□□ 0.04
SUCLG1-203ENST00000442240 BRPF1P55201 1214 aaPredicted RBP15.29■□□□□ 0.04
SUCLG1-203ENST00000442240 NBPF6Q5VWK0 638 aa15.29■□□□□ 0.04
SUCLG1-203ENST00000442240 ZKSCAN2Q63HK3 967 aa15.29■□□□□ 0.04
SUCLG1-203ENST00000442240 NBPF4Q96M43 638 aa15.29■□□□□ 0.04
SUCLG1-203ENST00000442240 CHMP4AQ9BY43 222 aa15.29■□□□□ 0.04
SUCLG1-203ENST00000442240 MBIPQ9NS73 344 aa15.29■□□□□ 0.04
SUCLG1-203ENST00000442240 CRB1P82279 1406 aa15.28■□□□□ 0.04
SUCLG1-203ENST00000442240 BCAR3O75815 825 aa15.28■□□□□ 0.04
SUCLG1-203ENST00000442240 EXOC6Q8TAG9 804 aa15.28■□□□□ 0.04
SUCLG1-203ENST00000442240 LRRC59Q96AG4 307 aaKnown RBP15.28■□□□□ 0.04
SUCLG1-203ENST00000442240 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
SUCLG1-203ENST00000442240 RGPD2P0DJD1 1756 aa15.27■□□□□ 0.04
SUCLG1-203ENST00000442240 RGPD5Q99666 1765 aa15.27■□□□□ 0.04
SUCLG1-203ENST00000442240 CHL1O00533 1208 aa15.27■□□□□ 0.04
SUCLG1-203ENST00000442240 CSB-PGBD3P0DP91 1061 aa15.27■□□□□ 0.04
SUCLG1-203ENST00000442240 AKAP4Q5JQC9 854 aa15.27■□□□□ 0.04
SUCLG1-203ENST00000442240 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.04
SUCLG1-203ENST00000442240 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
SUCLG1-203ENST00000442240 CRBNQ96SW2 442 aa15.27■□□□□ 0.04
SUCLG1-203ENST00000442240 CHMP4BQ9H444 224 aaKnown RBP15.27■□□□□ 0.04
SUCLG1-203ENST00000442240 PRDM11Q9NQV5 511 aa15.27■□□□□ 0.04
SUCLG1-203ENST00000442240 FAM83GA6ND36 823 aa15.26■□□□□ 0.03
SUCLG1-203ENST00000442240 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
SUCLG1-203ENST00000442240 FTSJ3Q8IY81 847 aaKnown RBP15.26■□□□□ 0.03
SUCLG1-203ENST00000442240 FRAT1Q92837 279 aaPredicted RBP15.26■□□□□ 0.03
SUCLG1-203ENST00000442240 THUMPD2Q9BTF0 503 aaKnown RBP15.26■□□□□ 0.03
SUCLG1-203ENST00000442240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.26■□□□□ 0.03
SUCLG1-203ENST00000442240 TOM1O60784 492 aa15.25■□□□□ 0.03
SUCLG1-203ENST00000442240 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
SUCLG1-203ENST00000442240 TATP17735 454 aaPredicted RBP15.25■□□□□ 0.03
SUCLG1-203ENST00000442240 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
SUCLG1-203ENST00000442240 MCM10Q7L590 875 aa15.25■□□□□ 0.03
SUCLG1-203ENST00000442240 USHBP1Q8N6Y0 703 aa15.25■□□□□ 0.03
SUCLG1-203ENST00000442240 PARP4Q9UKK3 1724 aaKnown RBP15.25■□□□□ 0.03
SUCLG1-203ENST00000442240 DCTN1Q14203 1278 aa15.24■□□□□ 0.03
SUCLG1-203ENST00000442240 ZNF530Q6P9A1 599 aaPredicted RBP15.24■□□□□ 0.03
SUCLG1-203ENST00000442240 ARHGAP45Q92619 1136 aa15.24■□□□□ 0.03
SUCLG1-203ENST00000442240 NLRP2Q9NX02 1062 aa15.24■□□□□ 0.03
SUCLG1-203ENST00000442240 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
SUCLG1-203ENST00000442240 SPG7Q9UQ90 795 aa15.24■□□□□ 0.03
SUCLG1-203ENST00000442240 CEMIPQ8WUJ3 1361 aa15.24■□□□□ 0.03
SUCLG1-203ENST00000442240 VAMP4O75379 141 aa15.23■□□□□ 0.03
SUCLG1-203ENST00000442240 CABLES1Q8TDN4 633 aa15.23■□□□□ 0.03
SUCLG1-203ENST00000442240 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
SUCLG1-203ENST00000442240 AXIN2Q9Y2T1 843 aa15.23■□□□□ 0.03
SUCLG1-203ENST00000442240 WDR17Q8IZU2 1322 aa15.22■□□□□ 0.03
SUCLG1-203ENST00000442240 COL14A1Q05707 1796 aaKnown RBP15.22■□□□□ 0.03
SUCLG1-203ENST00000442240 TAF7Q15545 349 aaPredicted RBP15.22■□□□□ 0.03
SUCLG1-203ENST00000442240 ATF7IPQ6VMQ6 1270 aa15.22■□□□□ 0.03
SUCLG1-203ENST00000442240 DZIP1LQ8IYY4 767 aaKnown RBP15.22■□□□□ 0.03
SUCLG1-203ENST00000442240 PHLPP1O60346 1717 aa15.22■□□□□ 0.03
SUCLG1-203ENST00000442240 PKD1L3Q7Z443 1732 aa15.22■□□□□ 0.03
SUCLG1-203ENST00000442240 COL5A2P05997 1499 aaPredicted RBP15.21■□□□□ 0.03
SUCLG1-203ENST00000442240 HSP90AB1P08238 724 aaKnown RBP15.21■□□□□ 0.03
SUCLG1-203ENST00000442240 C20orf194Q5TEA3 1177 aa15.21■□□□□ 0.03
SUCLG1-203ENST00000442240 ADAMTS7Q9UKP4 1686 aa15.2■□□□□ 0.02
SUCLG1-203ENST00000442240 TEFQ10587 303 aa15.2■□□□□ 0.02
SUCLG1-203ENST00000442240 BCL2L13Q9BXK5 485 aa15.2■□□□□ 0.02
SUCLG1-203ENST00000442240 API5Q9BZZ5 524 aaKnown RBP15.2■□□□□ 0.02
SUCLG1-203ENST00000442240 DDX19BQ9UMR2 479 aa15.2■□□□□ 0.02
SUCLG1-203ENST00000442240 CHRNA2Q15822 529 aa15.19■□□□□ 0.02
SUCLG1-203ENST00000442240 COL16A1Q07092 1604 aaPredicted RBP15.18■□□□□ 0.02
SUCLG1-203ENST00000442240 HOXB7P09629 217 aa15.18■□□□□ 0.02
SUCLG1-203ENST00000442240 MVPQ14764 893 aaKnown RBP15.18■□□□□ 0.02
SUCLG1-203ENST00000442240 CENPQQ7L2Z9 268 aaPredicted RBP15.18■□□□□ 0.02
SUCLG1-203ENST00000442240 CLUAP1Q96AJ1 413 aa15.18■□□□□ 0.02
SUCLG1-203ENST00000442240 KDM3BQ7LBC6 1761 aa15.18■□□□□ 0.02
SUCLG1-203ENST00000442240 PTPRCP08575 1304 aa15.17■□□□□ 0.02
SUCLG1-203ENST00000442240 TOM1L2Q6ZVM7 507 aa15.17■□□□□ 0.02
SUCLG1-203ENST00000442240 MRPL50Q8N5N7 158 aaKnown RBP15.17■□□□□ 0.02
SUCLG1-203ENST00000442240 C8orf58Q8NAV2 365 aa15.17■□□□□ 0.02
SUCLG1-203ENST00000442240 IL17REQ8NFR9 667 aa15.17■□□□□ 0.02
SUCLG1-203ENST00000442240 NOB1Q9ULX3 412 aaKnown RBP15.17■□□□□ 0.02
SUCLG1-203ENST00000442240 VIRMAQ69YN4 1812 aaKnown RBP15.16■□□□□ 0.02
SUCLG1-203ENST00000442240 RNMTO43148 476 aaKnown RBP15.16■□□□□ 0.02
SUCLG1-203ENST00000442240 TRIM27P14373 513 aa15.16■□□□□ 0.02
SUCLG1-203ENST00000442240 EVA1CP58658 441 aa15.16■□□□□ 0.02
SUCLG1-203ENST00000442240 IFNL2Q8IZJ0 200 aa15.16■□□□□ 0.02
SUCLG1-203ENST00000442240 PANK1Q8TE04 598 aa15.16■□□□□ 0.02
SUCLG1-203ENST00000442240 CARD10Q9BWT7 1032 aa15.16■□□□□ 0.02
SUCLG1-203ENST00000442240 STK31Q9BXU1 1019 aa15.16■□□□□ 0.02
SUCLG1-203ENST00000442240 COG6Q9Y2V7 657 aa15.16■□□□□ 0.02
SUCLG1-203ENST00000442240 MEGF6O75095 1541 aa15.16■□□□□ 0.02
SUCLG1-203ENST00000442240 CCDC30Q5VVM6 783 aa15.15■□□□□ 0.02
SUCLG1-203ENST00000442240 AEBP2Q6ZN18 517 aaPredicted RBP15.15■□□□□ 0.02
SUCLG1-203ENST00000442240 TSPYL6Q8N831 410 aa15.15■□□□□ 0.02
SUCLG1-203ENST00000442240 PCDH11XQ9BZA7 1347 aa15.15■□□□□ 0.02
SUCLG1-203ENST00000442240 PCDH11YQ9BZA8 1340 aa15.15■□□□□ 0.02
SUCLG1-203ENST00000442240 SCN11AQ9UI33 1791 aa15.14■□□□□ 0.01
SUCLG1-203ENST00000442240 PLCH1Q4KWH8 1693 aa15.14■□□□□ 0.01
SUCLG1-203ENST00000442240 CACNA1FO60840 1977 aa15.14■□□□□ 0.01
SUCLG1-203ENST00000442240 MRC1P22897 1456 aa15.14■□□□□ 0.01
SUCLG1-203ENST00000442240 SIPA1L3O60292 1781 aaPredicted RBP15.13■□□□□ 0.01
SUCLG1-203ENST00000442240 BTBD11A6QL63 1104 aa15.13■□□□□ 0.01
SUCLG1-203ENST00000442240 ELL2O00472 640 aaPredicted RBP15.13■□□□□ 0.01
SUCLG1-203ENST00000442240 PHKG2P15735 406 aa15.13■□□□□ 0.01
SUCLG1-203ENST00000442240 ITPRIPQ8IWB1 547 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms