RNA–Protein interactions for RNA: ENST00000441796.1

CRAT-204, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-204ENST00000441796 RGPD2P0DJD1 1756 aa31.2■■■□□ 2.58
CRAT-204ENST00000441796 KCNQ2O43526 872 aa31.18■■■□□ 2.58
CRAT-204ENST00000441796 ACSBG1Q96GR2 724 aa31.17■■■□□ 2.58
CRAT-204ENST00000441796 SBF2Q86WG5 1849 aa31.17■■■□□ 2.58
CRAT-204ENST00000441796 CC2D1BQ5T0F9 858 aaKnown RBP31.15■■■□□ 2.58
CRAT-204ENST00000441796 IGSF1Q8N6C5 1336 aa31.11■■■□□ 2.57
CRAT-204ENST00000441796 PCDH11XQ9BZA7 1347 aa31.11■■■□□ 2.57
CRAT-204ENST00000441796 PCDH11YQ9BZA8 1340 aa31.11■■■□□ 2.57
CRAT-204ENST00000441796 NHSQ6T4R5 1651 aa31.09■■■□□ 2.57
CRAT-204ENST00000441796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.09■■■□□ 2.57
CRAT-204ENST00000441796 PLEKHG2Q9H7P9 1386 aa31.08■■■□□ 2.57
CRAT-204ENST00000441796 MTHFSP49914 203 aa31.08■■■□□ 2.57
CRAT-204ENST00000441796 NBPF14Q5TI25 921 aa31.08■■■□□ 2.57
CRAT-204ENST00000441796 RGPD3A6NKT7 1758 aaPredicted RBP31.07■■■□□ 2.56
CRAT-204ENST00000441796 RGPD4Q7Z3J3 1758 aa31.07■■■□□ 2.56
CRAT-204ENST00000441796 RREB1Q92766 1687 aa31.07■■■□□ 2.56
CRAT-204ENST00000441796 PROM2Q8N271 834 aa31.07■■■□□ 2.56
CRAT-204ENST00000441796 SPG7Q9UQ90 795 aa31.07■■■□□ 2.56
CRAT-204ENST00000441796 PSDA5PKW4 1024 aaPredicted RBP31.06■■■□□ 2.56
CRAT-204ENST00000441796 CYP27B1O15528 508 aa31.05■■■□□ 2.56
CRAT-204ENST00000441796 IL13P35225 146 aa31.05■■■□□ 2.56
CRAT-204ENST00000441796 PRIM1P49642 420 aaKnown RBP31.05■■■□□ 2.56
CRAT-204ENST00000441796 R3HDM1Q15032 1099 aaKnown RBP31.05■■■□□ 2.56
CRAT-204ENST00000441796 SHANK3Q9BYB0 1731 aa31.04■■■□□ 2.56
CRAT-204ENST00000441796 TXNRD1Q16881 649 aa31.04■■■□□ 2.56
CRAT-204ENST00000441796 SYTL4Q96C24 671 aaPredicted RBP31.01■■■□□ 2.55
CRAT-204ENST00000441796 NKX1-1Q15270 411 aaPredicted RBP31■■■□□ 2.55
CRAT-204ENST00000441796 NUP188Q5SRE5 1749 aa31■■■□□ 2.55
CRAT-204ENST00000441796 PKD1L3Q7Z443 1732 aa30.98■■■□□ 2.55
CRAT-204ENST00000441796 CNGB1Q14028 1251 aaPredicted RBP30.98■■■□□ 2.55
CRAT-204ENST00000441796 KDRP35968 1356 aa30.96■■■□□ 2.55
CRAT-204ENST00000441796 IFNL2Q8IZJ0 200 aa30.96■■■□□ 2.55
CRAT-204ENST00000441796 ZEB1P37275 1124 aaPredicted RBP30.95■■■□□ 2.55
CRAT-204ENST00000441796 SULT6B1Q6IMI4 303 aa30.95■■■□□ 2.55
CRAT-204ENST00000441796 AEBP1Q8IUX7 1158 aa30.95■■■□□ 2.55
CRAT-204ENST00000441796 DIAPH1O60610 1272 aaKnown RBP30.94■■■□□ 2.54
CRAT-204ENST00000441796 PHKG2P15735 406 aa30.94■■■□□ 2.54
CRAT-204ENST00000441796 AMOTQ4VCS5 1084 aa30.94■■■□□ 2.54
CRAT-204ENST00000441796 PLEKHO1Q53GL0 409 aaPredicted RBP30.94■■■□□ 2.54
CRAT-204ENST00000441796 ANO8Q9HCE9 1232 aaPredicted RBP30.94■■■□□ 2.54
CRAT-204ENST00000441796 BTAF1O14981 1849 aa30.93■■■□□ 2.54
CRAT-204ENST00000441796 SLC27A3Q5K4L6 730 aa30.92■■■□□ 2.54
CRAT-204ENST00000441796 DOT1LQ8TEK3 1739 aa30.92■■■□□ 2.54
CRAT-204ENST00000441796 LRRC4BQ9NT99 713 aa30.88■■■□□ 2.53
CRAT-204ENST00000441796 STK32BQ9NY57 414 aa30.88■■■□□ 2.53
CRAT-204ENST00000441796 SLC15A2Q16348 729 aa30.87■■■□□ 2.53
CRAT-204ENST00000441796 MPRIPQ6WCQ1 1025 aa30.87■■■□□ 2.53
CRAT-204ENST00000441796 COL3A1P02461 1466 aaPredicted RBP30.87■■■□□ 2.53
CRAT-204ENST00000441796 HSP90AB1P08238 724 aaKnown RBP30.86■■■□□ 2.53
CRAT-204ENST00000441796 PPP2R1AP30153 589 aa30.85■■■□□ 2.53
CRAT-204ENST00000441796 KAT6BQ8WYB5 2073 aa30.85■■■□□ 2.53
CRAT-204ENST00000441796 ZNF530Q6P9A1 599 aaPredicted RBP30.84■■■□□ 2.53
CRAT-204ENST00000441796 PIGBQ92521 554 aa30.84■■■□□ 2.53
CRAT-204ENST00000441796 CFAP53Q96M91 514 aa30.84■■■□□ 2.53
CRAT-204ENST00000441796 DCAF5Q96JK2 942 aa30.83■■■□□ 2.53
CRAT-204ENST00000441796 HMOX1P09601 288 aa30.82■■■□□ 2.52
CRAT-204ENST00000441796 SMARCC1Q92922 1105 aaPredicted RBP30.81■■■□□ 2.52
CRAT-204ENST00000441796 C1orf141Q5JVX7 400 aa30.8■■■□□ 2.52
CRAT-204ENST00000441796 TMOD3Q9NYL9 352 aa30.8■■■□□ 2.52
CRAT-204ENST00000441796 CCNL1Q9UK58 526 aaPredicted RBP30.8■■■□□ 2.52
CRAT-204ENST00000441796 SRCAPQ6ZRS2 3230 aa30.79■■■□□ 2.52
CRAT-204ENST00000441796 TOGARAM1Q9Y4F4 1720 aa30.79■■■□□ 2.52
CRAT-204ENST00000441796 ERVV-2B6SEH9 535 aa30.79■■■□□ 2.52
CRAT-204ENST00000441796 LRP5O75197 1615 aa30.79■■■□□ 2.52
CRAT-204ENST00000441796 PAPPAQ13219 1627 aa30.79■■■□□ 2.52
CRAT-204ENST00000441796 PALLDQ8WX93 1383 aa30.79■■■□□ 2.52
CRAT-204ENST00000441796 U2SURPO15042 1029 aaKnown RBP30.78■■■□□ 2.52
CRAT-204ENST00000441796 AKT1S1Q96B36 256 aa30.78■■■□□ 2.52
CRAT-204ENST00000441796 HMGB2P26583 209 aaKnown RBP30.77■■■□□ 2.52
CRAT-204ENST00000441796 DDX10Q13206 875 aaKnown RBP30.77■■■□□ 2.52
CRAT-204ENST00000441796 KCNQ4P56696 695 aa30.76■■■□□ 2.51
CRAT-204ENST00000441796 ZNF827Q17R98 1081 aa30.75■■■□□ 2.51
CRAT-204ENST00000441796 NUDCQ9Y266 331 aa30.75■■■□□ 2.51
CRAT-204ENST00000441796 LY75O60449 1722 aa30.74■■■□□ 2.51
CRAT-204ENST00000441796 AKAP4Q5JQC9 854 aa30.74■■■□□ 2.51
CRAT-204ENST00000441796 KDM6AO15550 1401 aaPredicted RBP30.73■■■□□ 2.51
CRAT-204ENST00000441796 PDGFDQ9GZP0 370 aaPredicted RBP30.73■■■□□ 2.51
CRAT-204ENST00000441796 SPON1Q9HCB6 807 aa30.73■■■□□ 2.51
CRAT-204ENST00000441796 MTHFSDQ2M296 383 aaKnown RBP30.7■■■□□ 2.51
CRAT-204ENST00000441796 ASAP1Q9ULH1 1129 aa30.7■■■□□ 2.51
CRAT-204ENST00000441796 ITGB4P16144 1822 aa30.69■■■□□ 2.5
CRAT-204ENST00000441796 CABP4P57796 275 aa30.69■■■□□ 2.5
CRAT-204ENST00000441796 ATG3Q9NT62 314 aa30.69■■■□□ 2.5
CRAT-204ENST00000441796 RALBP1Q15311 655 aa30.68■■■□□ 2.5
CRAT-204ENST00000441796 LOC102724428A0A0B4J2F2 783 aa30.67■■■□□ 2.5
CRAT-204ENST00000441796 SIK1P57059 783 aa30.67■■■□□ 2.5
CRAT-204ENST00000441796 CASZ1Q86V15 1759 aa30.66■■■□□ 2.5
CRAT-204ENST00000441796 TFCP2L1Q9NZI6 479 aa30.66■■■□□ 2.5
CRAT-204ENST00000441796 RSPH6AQ9H0K4 717 aa30.65■■■□□ 2.5
CRAT-204ENST00000441796 ZBTB7AO95365 584 aa30.64■■■□□ 2.5
CRAT-204ENST00000441796 GAS2L2Q8NHY3 880 aa30.64■■■□□ 2.5
CRAT-204ENST00000441796 U2AF1L5P0DN76 240 aaPredicted RBP30.63■■■□□ 2.49
CRAT-204ENST00000441796 U2AF1Q01081 240 aaKnown RBP eCLIP30.63■■■□□ 2.49
CRAT-204ENST00000441796 NFATC2IPQ8NCF5 419 aa30.63■■■□□ 2.49
CRAT-204ENST00000441796 MTFR1LQ9H019 292 aa30.63■■■□□ 2.49
CRAT-204ENST00000441796 PNPLA7Q6ZV29 1317 aa30.63■■■□□ 2.49
CRAT-204ENST00000441796 RNMTO43148 476 aaKnown RBP30.62■■■□□ 2.49
CRAT-204ENST00000441796 FCHSD2O94868 740 aa30.62■■■□□ 2.49
CRAT-204ENST00000441796 PRKAR2BP31323 418 aa30.62■■■□□ 2.49
CRAT-204ENST00000441796 SLC16A10Q8TF71 515 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms