RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 DLG5Q8TDM6 1919 aa20.78■□□□□ 0.92
MCF2L-217ENST00000441756 HTATSF1O43719 755 aaKnown RBP20.78■□□□□ 0.92
MCF2L-217ENST00000441756 MTHFSDQ2M296 383 aaKnown RBP20.78■□□□□ 0.92
MCF2L-217ENST00000441756 LARP1Q6PKG0 1096 aaKnown RBP20.78■□□□□ 0.92
MCF2L-217ENST00000441756 RTF1Q92541 710 aaKnown RBP20.78■□□□□ 0.92
MCF2L-217ENST00000441756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.78■□□□□ 0.92
MCF2L-217ENST00000441756 TRIM35Q9UPQ4 493 aa20.78■□□□□ 0.92
MCF2L-217ENST00000441756 LRP6O75581 1613 aa20.78■□□□□ 0.92
MCF2L-217ENST00000441756 MAP3K5Q99683 1374 aa20.77■□□□□ 0.92
MCF2L-217ENST00000441756 MEX3CQ5U5Q3 659 aaKnown RBP20.77■□□□□ 0.92
MCF2L-217ENST00000441756 SPG7Q9UQ90 795 aa20.77■□□□□ 0.92
MCF2L-217ENST00000441756 MYH16Q9H6N6 1097 aa20.76■□□□□ 0.91
MCF2L-217ENST00000441756 OVOS2A0A0G2JMS6 1433 aa20.76■□□□□ 0.91
MCF2L-217ENST00000441756 PKD1L3Q7Z443 1732 aa20.75■□□□□ 0.91
MCF2L-217ENST00000441756 MEGF6O75095 1541 aa20.75■□□□□ 0.91
MCF2L-217ENST00000441756 GNAT3A8MTJ3 354 aa20.75■□□□□ 0.91
MCF2L-217ENST00000441756 C1orf141Q5JVX7 400 aa20.75■□□□□ 0.91
MCF2L-217ENST00000441756 NGLY1Q96IV0 654 aa20.75■□□□□ 0.91
MCF2L-217ENST00000441756 C8orf37Q96NL8 207 aa20.75■□□□□ 0.91
MCF2L-217ENST00000441756 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.75■□□□□ 0.91
MCF2L-217ENST00000441756 IL2RBP14784 551 aa20.74■□□□□ 0.91
MCF2L-217ENST00000441756 SLFN5Q08AF3 891 aa20.74■□□□□ 0.91
MCF2L-217ENST00000441756 ZNF530Q6P9A1 599 aaPredicted RBP20.74■□□□□ 0.91
MCF2L-217ENST00000441756 AKAP4Q5JQC9 854 aa20.73■□□□□ 0.91
MCF2L-217ENST00000441756 UNC5CLQ8IV45 518 aa20.72■□□□□ 0.91
MCF2L-217ENST00000441756 THRAP3Q9Y2W1 955 aaKnown RBP20.72■□□□□ 0.91
MCF2L-217ENST00000441756 FNBP4Q8N3X1 1017 aaPredicted RBP20.71■□□□□ 0.91
MCF2L-217ENST00000441756 CDCA7LQ96GN5 454 aa20.71■□□□□ 0.91
MCF2L-217ENST00000441756 CDCA7Q9BWT1 371 aaPredicted RBP20.71■□□□□ 0.91
MCF2L-217ENST00000441756 WNK3Q9BYP7 1800 aa20.71■□□□□ 0.91
MCF2L-217ENST00000441756 LRRC37A3O60309 1634 aa20.71■□□□□ 0.91
MCF2L-217ENST00000441756 GNAI1P63096 354 aa20.7■□□□□ 0.9
MCF2L-217ENST00000441756 DUSP27Q5VZP5 1158 aa20.69■□□□□ 0.9
MCF2L-217ENST00000441756 TRMT2AQ8IZ69 625 aaKnown RBP20.69■□□□□ 0.9
MCF2L-217ENST00000441756 IFT57Q9NWB7 429 aa20.69■□□□□ 0.9
MCF2L-217ENST00000441756 PCDH11XQ9BZA7 1347 aa20.69■□□□□ 0.9
MCF2L-217ENST00000441756 PCDH11YQ9BZA8 1340 aa20.69■□□□□ 0.9
MCF2L-217ENST00000441756 HSP90AB1P08238 724 aaKnown RBP20.68■□□□□ 0.9
MCF2L-217ENST00000441756 USP35Q9P2H5 1018 aa20.68■□□□□ 0.9
MCF2L-217ENST00000441756 CCDC9Q9Y3X0 531 aaKnown RBP20.68■□□□□ 0.9
MCF2L-217ENST00000441756 SPATA31A1Q5TZJ5 1347 aa20.68■□□□□ 0.9
MCF2L-217ENST00000441756 DISP2A7MBM2 1401 aa20.68■□□□□ 0.9
MCF2L-217ENST00000441756 VPS72Q15906 364 aa20.67■□□□□ 0.9
MCF2L-217ENST00000441756 IFNL2Q8IZJ0 200 aa20.67■□□□□ 0.9
MCF2L-217ENST00000441756 ZCRB1Q8TBF4 217 aaKnown RBP20.67■□□□□ 0.9
MCF2L-217ENST00000441756 USP21Q9UK80 565 aa20.67■□□□□ 0.9
MCF2L-217ENST00000441756 SPATA31A5Q5VU36 1347 aa20.67■□□□□ 0.9
MCF2L-217ENST00000441756 SPATA31A7Q8IWB4 1347 aa20.67■□□□□ 0.9
MCF2L-217ENST00000441756 BCL9LQ86UU0 1499 aa20.67■□□□□ 0.9
MCF2L-217ENST00000441756 MCM10Q7L590 875 aa20.66■□□□□ 0.9
MCF2L-217ENST00000441756 CFAP44Q96MT7 982 aa20.65■□□□□ 0.9
MCF2L-217ENST00000441756 ADAMTS7Q9UKP4 1686 aa20.64■□□□□ 0.9
MCF2L-217ENST00000441756 CEMIPQ8WUJ3 1361 aa20.64■□□□□ 0.89
MCF2L-217ENST00000441756 PHKG2P15735 406 aa20.64■□□□□ 0.89
MCF2L-217ENST00000441756 DCTN1Q14203 1278 aa20.64■□□□□ 0.89
MCF2L-217ENST00000441756 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.89
MCF2L-217ENST00000441756 SPINK5Q9NQ38 1064 aaPredicted RBP20.64■□□□□ 0.89
MCF2L-217ENST00000441756 AFF2P51816 1311 aa20.63■□□□□ 0.89
MCF2L-217ENST00000441756 FANCIQ9NVI1 1328 aa20.63■□□□□ 0.89
MCF2L-217ENST00000441756 BARGINQ6ZT62 677 aa20.63■□□□□ 0.89
MCF2L-217ENST00000441756 BABAM1Q9NWV8 329 aa20.63■□□□□ 0.89
MCF2L-217ENST00000441756 LAS1LQ9Y4W2 734 aaKnown RBP20.63■□□□□ 0.89
MCF2L-217ENST00000441756 TNS2Q63HR2 1409 aa20.62■□□□□ 0.89
MCF2L-217ENST00000441756 CT47B1P0C2W7 299 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-217ENST00000441756 TEFQ10587 303 aa20.62■□□□□ 0.89
MCF2L-217ENST00000441756 DCAF5Q96JK2 942 aa20.62■□□□□ 0.89
MCF2L-217ENST00000441756 RNMTO43148 476 aaKnown RBP20.61■□□□□ 0.89
MCF2L-217ENST00000441756 ZNF853P0CG23 659 aa20.61■□□□□ 0.89
MCF2L-217ENST00000441756 SCN11AQ9UI33 1791 aa20.6■□□□□ 0.89
MCF2L-217ENST00000441756 IL17REQ8NFR9 667 aa20.6■□□□□ 0.89
MCF2L-217ENST00000441756 SHANK3Q9BYB0 1731 aa20.6■□□□□ 0.89
MCF2L-217ENST00000441756 EXOC5O00471 708 aa20.59■□□□□ 0.89
MCF2L-217ENST00000441756 CYP27B1O15528 508 aa20.59■□□□□ 0.89
MCF2L-217ENST00000441756 TAF7Q15545 349 aaPredicted RBP20.59■□□□□ 0.89
MCF2L-217ENST00000441756 MPRIPQ6WCQ1 1025 aa20.59■□□□□ 0.89
MCF2L-217ENST00000441756 RCAN3Q9UKA8 241 aa20.59■□□□□ 0.89
MCF2L-217ENST00000441756 TRPC5Q9UL62 973 aaPredicted RBP20.59■□□□□ 0.89
MCF2L-217ENST00000441756 VIRMAQ69YN4 1812 aaKnown RBP20.59■□□□□ 0.89
MCF2L-217ENST00000441756 MRC1P22897 1456 aa20.58■□□□□ 0.89
MCF2L-217ENST00000441756 CHL1O00533 1208 aa20.58■□□□□ 0.89
MCF2L-217ENST00000441756 ILDR2Q71H61 639 aa20.58■□□□□ 0.89
MCF2L-217ENST00000441756 TSR2Q969E8 191 aaKnown RBP20.58■□□□□ 0.89
MCF2L-217ENST00000441756 MBIPQ9NS73 344 aa20.58■□□□□ 0.89
MCF2L-217ENST00000441756 ATRNO75882 1429 aa20.58■□□□□ 0.88
MCF2L-217ENST00000441756 KDM6AO15550 1401 aaPredicted RBP20.57■□□□□ 0.88
MCF2L-217ENST00000441756 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
MCF2L-217ENST00000441756 NKX1-1Q15270 411 aaPredicted RBP20.56■□□□□ 0.88
MCF2L-217ENST00000441756 DDB1Q16531 1140 aa20.56■□□□□ 0.88
MCF2L-217ENST00000441756 DDX54Q8TDD1 881 aaKnown RBP20.55■□□□□ 0.88
MCF2L-217ENST00000441756 LGR6Q9HBX8 967 aa20.55■□□□□ 0.88
MCF2L-217ENST00000441756 SOCS7O14512 581 aa20.54■□□□□ 0.88
MCF2L-217ENST00000441756 EXOSC9Q06265 439 aaKnown RBP20.54■□□□□ 0.88
MCF2L-217ENST00000441756 ZNF428Q96B54 188 aa20.54■□□□□ 0.88
MCF2L-217ENST00000441756 SIPA1L3O60292 1781 aaPredicted RBP20.54■□□□□ 0.88
MCF2L-217ENST00000441756 ERVV-2B6SEH9 535 aa20.53■□□□□ 0.88
MCF2L-217ENST00000441756 ZNF772Q68DY9 489 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-217ENST00000441756 GJD4Q96KN9 370 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-217ENST00000441756 SLC52A2Q9HAB3 445 aa20.53■□□□□ 0.88
MCF2L-217ENST00000441756 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-217ENST00000441756 KDM3BQ7LBC6 1761 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms