RNA–Protein interactions for RNA: ENST00000441616.5

TRIM2-204, Transcript of tripartite motif containing 2, humanhuman

TSL 3

Gene TRIM2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-204ENST00000441616 PLEKHG2Q9H7P9 1386 aa8.06□□□□□ -1.12
TRIM2-204ENST00000441616 COL3A1P02461 1466 aaPredicted RBP8.06□□□□□ -1.12
TRIM2-204ENST00000441616 HSP90AB1P08238 724 aaKnown RBP8.05□□□□□ -1.12
TRIM2-204ENST00000441616 POTEAQ6S8J7 498 aa8.05□□□□□ -1.12
TRIM2-204ENST00000441616 KRT27Q7Z3Y8 459 aa8.05□□□□□ -1.12
TRIM2-204ENST00000441616 MIER1Q8N108 512 aa8.05□□□□□ -1.12
TRIM2-204ENST00000441616 DDX54Q8TDD1 881 aaKnown RBP8.05□□□□□ -1.12
TRIM2-204ENST00000441616 RTF1Q92541 710 aaKnown RBP8.05□□□□□ -1.12
TRIM2-204ENST00000441616 GLI3P10071 1580 aa8.05□□□□□ -1.12
TRIM2-204ENST00000441616 OVOS2A0A0G2JMS6 1433 aa8.04□□□□□ -1.12
TRIM2-204ENST00000441616 TNS2Q63HR2 1409 aa8.04□□□□□ -1.12
TRIM2-204ENST00000441616 LMOD3Q0VAK6 560 aa8.04□□□□□ -1.12
TRIM2-204ENST00000441616 SF3B2Q13435 895 aaKnown RBP8.04□□□□□ -1.12
TRIM2-204ENST00000441616 ZNF530Q6P9A1 599 aaPredicted RBP8.04□□□□□ -1.12
TRIM2-204ENST00000441616 AEBP1Q8IUX7 1158 aa8.04□□□□□ -1.12
TRIM2-204ENST00000441616 RGS17Q9UGC6 210 aaPredicted RBP8.04□□□□□ -1.12
TRIM2-204ENST00000441616 MEGF6O75095 1541 aa8.03□□□□□ -1.12
TRIM2-204ENST00000441616 KDRP35968 1356 aa8.03□□□□□ -1.12
TRIM2-204ENST00000441616 CCDC146Q8IYE0 955 aa8.03□□□□□ -1.12
TRIM2-204ENST00000441616 IFNL2Q8IZJ0 200 aa8.03□□□□□ -1.12
TRIM2-204ENST00000441616 RUNDC1Q96C34 613 aa8.03□□□□□ -1.12
TRIM2-204ENST00000441616 RSPH6AQ9H0K4 717 aa8.03□□□□□ -1.12
TRIM2-204ENST00000441616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRIM2-204ENST00000441616 RGS12O14924 1447 aa8.03□□□□□ -1.12
TRIM2-204ENST00000441616 WNK3Q9BYP7 1800 aa8.02□□□□□ -1.13
TRIM2-204ENST00000441616 ONECUT3O60422 494 aaPredicted RBP8.02□□□□□ -1.13
TRIM2-204ENST00000441616 AKAP4Q5JQC9 854 aa8.02□□□□□ -1.13
TRIM2-204ENST00000441616 SYTL4Q96C24 671 aaPredicted RBP8.02□□□□□ -1.13
TRIM2-204ENST00000441616 ADAMTS8Q9UP79 889 aa8.02□□□□□ -1.13
TRIM2-204ENST00000441616 RGPD1P0DJD0 1748 aa8.02□□□□□ -1.13
TRIM2-204ENST00000441616 LRRC37A3O60309 1634 aa8.02□□□□□ -1.13
TRIM2-204ENST00000441616 DISP2A7MBM2 1401 aa8.02□□□□□ -1.13
TRIM2-204ENST00000441616 NCAPD2Q15021 1401 aa8.02□□□□□ -1.13
TRIM2-204ENST00000441616 THSD7AQ9UPZ6 1657 aa8.02□□□□□ -1.13
TRIM2-204ENST00000441616 GNAT3A8MTJ3 354 aa8.01□□□□□ -1.13
TRIM2-204ENST00000441616 FAM196AQ6ZSG2 479 aa8.01□□□□□ -1.13
TRIM2-204ENST00000441616 PNISRQ8TF01 805 aaKnown RBP8.01□□□□□ -1.13
TRIM2-204ENST00000441616 RGPD2P0DJD1 1756 aa8.01□□□□□ -1.13
TRIM2-204ENST00000441616 MAP3K5Q99683 1374 aa8□□□□□ -1.13
TRIM2-204ENST00000441616 PHKG2P15735 406 aa8□□□□□ -1.13
TRIM2-204ENST00000441616 CALD1Q05682 793 aaKnown RBP8□□□□□ -1.13
TRIM2-204ENST00000441616 TEFQ10587 303 aa8□□□□□ -1.13
TRIM2-204ENST00000441616 NEUROD2Q15784 382 aa8□□□□□ -1.13
TRIM2-204ENST00000441616 NFE2L2Q16236 605 aa8□□□□□ -1.13
TRIM2-204ENST00000441616 DCAF5Q96JK2 942 aa8□□□□□ -1.13
TRIM2-204ENST00000441616 RIPK4P57078 832 aa7.99□□□□□ -1.13
TRIM2-204ENST00000441616 CABP4P57796 275 aa7.99□□□□□ -1.13
TRIM2-204ENST00000441616 MTHFSDQ2M296 383 aaKnown RBP7.99□□□□□ -1.13
TRIM2-204ENST00000441616 CCDC184Q52MB2 194 aa7.99□□□□□ -1.13
TRIM2-204ENST00000441616 TMOD3Q9NYL9 352 aa7.99□□□□□ -1.13
TRIM2-204ENST00000441616 PKD1L3Q7Z443 1732 aa7.98□□□□□ -1.13
TRIM2-204ENST00000441616 HTATSF1O43719 755 aaKnown RBP7.98□□□□□ -1.13
TRIM2-204ENST00000441616 MPRIPQ6WCQ1 1025 aa7.98□□□□□ -1.13
TRIM2-204ENST00000441616 NGEFQ8N5V2 710 aa7.98□□□□□ -1.13
TRIM2-204ENST00000441616 MARCH10Q8NA82 808 aaPredicted RBP7.98□□□□□ -1.13
TRIM2-204ENST00000441616 ACSBG1Q96GR2 724 aa7.98□□□□□ -1.13
TRIM2-204ENST00000441616 PHACTR3Q96KR7 559 aa7.98□□□□□ -1.13
TRIM2-204ENST00000441616 RRP7AQ9Y3A4 280 aaKnown RBP7.98□□□□□ -1.13
TRIM2-204ENST00000441616 APAF1O14727 1248 aa7.97□□□□□ -1.13
TRIM2-204ENST00000441616 CYP27B1O15528 508 aa7.97□□□□□ -1.13
TRIM2-204ENST00000441616 HMGB2P26583 209 aaKnown RBP7.97□□□□□ -1.13
TRIM2-204ENST00000441616 TMPOP42166 694 aaKnown RBP7.97□□□□□ -1.13
TRIM2-204ENST00000441616 FAM182BQ5T319 152 aa7.97□□□□□ -1.13
TRIM2-204ENST00000441616 TTC5Q8N0Z6 440 aa7.97□□□□□ -1.13
TRIM2-204ENST00000441616 PLEKHF1Q96S99 279 aa7.97□□□□□ -1.13
TRIM2-204ENST00000441616 SALL2Q9Y467 1007 aaPredicted RBP7.97□□□□□ -1.13
TRIM2-204ENST00000441616 ERVV-2B6SEH9 535 aa7.96□□□□□ -1.14
TRIM2-204ENST00000441616 TRIM37O94972 964 aa7.96□□□□□ -1.14
TRIM2-204ENST00000441616 BAG6P46379 1132 aa7.96□□□□□ -1.14
TRIM2-204ENST00000441616 HNRNPUQ00839 825 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRIM2-204ENST00000441616 CCDC125Q86Z20 511 aa7.96□□□□□ -1.14
TRIM2-204ENST00000441616 LAS1LQ9Y4W2 734 aaKnown RBP7.96□□□□□ -1.14
TRIM2-204ENST00000441616 RNMTO43148 476 aaKnown RBP7.95□□□□□ -1.14
TRIM2-204ENST00000441616 PRIM1P49642 420 aaKnown RBP7.95□□□□□ -1.14
TRIM2-204ENST00000441616 NKX1-1Q15270 411 aaPredicted RBP7.95□□□□□ -1.14
TRIM2-204ENST00000441616 MCM10Q7L590 875 aa7.95□□□□□ -1.14
TRIM2-204ENST00000441616 SMARCC1Q92922 1105 aaPredicted RBP7.95□□□□□ -1.14
TRIM2-204ENST00000441616 BCL11BQ9C0K0 894 aaPredicted RBP7.95□□□□□ -1.14
TRIM2-204ENST00000441616 BCL9O00512 1426 aa7.95□□□□□ -1.14
TRIM2-204ENST00000441616 BTBD11A6QL63 1104 aa7.94□□□□□ -1.14
TRIM2-204ENST00000441616 APBA3O96018 575 aa7.94□□□□□ -1.14
TRIM2-204ENST00000441616 SLC52A2Q9HAB3 445 aa7.94□□□□□ -1.14
TRIM2-204ENST00000441616 DOT1LQ8TEK3 1739 aa7.94□□□□□ -1.14
TRIM2-204ENST00000441616 SENP3-EIF4A1A0A087X0R7 540 aa7.93□□□□□ -1.14
TRIM2-204ENST00000441616 GNAI1P63096 354 aa7.93□□□□□ -1.14
TRIM2-204ENST00000441616 DCTN1Q14203 1278 aa7.93□□□□□ -1.14
TRIM2-204ENST00000441616 TAF7Q15545 349 aaPredicted RBP7.93□□□□□ -1.14
TRIM2-204ENST00000441616 NPM2Q86SE8 214 aaKnown RBP7.93□□□□□ -1.14
TRIM2-204ENST00000441616 NFATC2IPQ8NCF5 419 aa7.93□□□□□ -1.14
TRIM2-204ENST00000441616 YTHDC1Q96MU7 727 aaKnown RBP7.93□□□□□ -1.14
TRIM2-204ENST00000441616 MYH16Q9H6N6 1097 aa7.93□□□□□ -1.14
TRIM2-204ENST00000441616 TSPYL4Q9UJ04 414 aa7.93□□□□□ -1.14
TRIM2-204ENST00000441616 BRWD3Q6RI45 1802 aa7.93□□□□□ -1.14
TRIM2-204ENST00000441616 KDM6AO15550 1401 aaPredicted RBP7.93□□□□□ -1.14
TRIM2-204ENST00000441616 NHSQ6T4R5 1651 aa7.92□□□□□ -1.14
TRIM2-204ENST00000441616 SHANK3Q9BYB0 1731 aa7.92□□□□□ -1.14
TRIM2-204ENST00000441616 CCDC27Q2M243 656 aa7.92□□□□□ -1.14
TRIM2-204ENST00000441616 NCBP3Q53F19 620 aaKnown RBP7.92□□□□□ -1.14
TRIM2-204ENST00000441616 RBM42Q9BTD8 480 aaKnown RBP7.92□□□□□ -1.14
TRIM2-204ENST00000441616 CHMP4AQ9BY43 222 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms