RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 SYNMO15061 1565 aa11.78□□□□□ -0.52
ATL1-202ENST00000441560 NEK4P51957 841 aa11.78□□□□□ -0.52
ATL1-202ENST00000441560 SYT10Q6XYQ8 523 aa11.78□□□□□ -0.52
ATL1-202ENST00000441560 CCDC186Q7Z3E2 898 aa11.78□□□□□ -0.52
ATL1-202ENST00000441560 DRC7Q8IY82 874 aa11.78□□□□□ -0.52
ATL1-202ENST00000441560 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.78□□□□□ -0.52
ATL1-202ENST00000441560 POLR3AO14802 1390 aaPredicted RBP11.78□□□□□ -0.52
ATL1-202ENST00000441560 CADPSQ9ULU8 1353 aa11.78□□□□□ -0.52
ATL1-202ENST00000441560 CCDC172P0C7W6 258 aa11.77□□□□□ -0.52
ATL1-202ENST00000441560 GRIPAP1Q4V328 841 aa11.77□□□□□ -0.52
ATL1-202ENST00000441560 KIF1BPQ96EK5 621 aa11.77□□□□□ -0.52
ATL1-202ENST00000441560 SLC26A8Q96RN1 970 aa11.77□□□□□ -0.52
ATL1-202ENST00000441560 LAMC1P11047 1609 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 GUCY2CP25092 1073 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 INTS3Q68E01 1043 aaKnown RBP11.77□□□□□ -0.53
ATL1-202ENST00000441560 FAM43BQ6ZT52 329 aaPredicted RBP11.77□□□□□ -0.53
ATL1-202ENST00000441560 KANK1Q14678 1352 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 TDRD9Q8NDG6 1382 aaKnown RBP11.77□□□□□ -0.53
ATL1-202ENST00000441560 WDR62O43379 1518 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 REC8O95072 547 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 CASQ1P31415 396 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 CCDC27Q2M243 656 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 CEP135Q66GS9 1140 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 CTR9Q6PD62 1173 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 DRC1Q96MC2 740 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 CARD14Q9BXL6 1004 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 ZNF446Q9NWS9 450 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.53
ATL1-202ENST00000441560 IPO8O15397 1037 aaKnown RBP11.76□□□□□ -0.53
ATL1-202ENST00000441560 CT47B1P0C2W7 299 aaPredicted RBP11.76□□□□□ -0.53
ATL1-202ENST00000441560 KRBA2Q6ZNG9 492 aa11.76□□□□□ -0.53
ATL1-202ENST00000441560 C14orf37Q86TY3 774 aa11.76□□□□□ -0.53
ATL1-202ENST00000441560 POLKQ9UBT6 870 aa11.76□□□□□ -0.53
ATL1-202ENST00000441560 LCMT1Q9UIC8 334 aa11.76□□□□□ -0.53
ATL1-202ENST00000441560 MYO1CO00159 1063 aa11.75□□□□□ -0.53
ATL1-202ENST00000441560 POLR3GO15318 223 aaPredicted RBP11.75□□□□□ -0.53
ATL1-202ENST00000441560 TSPY4P0CV99 314 aa11.75□□□□□ -0.53
ATL1-202ENST00000441560 TSPY10P0CW01 314 aa11.75□□□□□ -0.53
ATL1-202ENST00000441560 SART3Q15020 963 aaKnown RBP11.75□□□□□ -0.53
ATL1-202ENST00000441560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.53
ATL1-202ENST00000441560 NRBP1Q9UHY1 535 aa11.75□□□□□ -0.53
ATL1-202ENST00000441560 BMS1Q14692 1282 aaKnown RBP11.75□□□□□ -0.53
ATL1-202ENST00000441560 IQSEC2Q5JU85 1478 aa11.75□□□□□ -0.53
ATL1-202ENST00000441560 MORC1Q86VD1 984 aa11.74□□□□□ -0.53
ATL1-202ENST00000441560 PLEKHM2Q8IWE5 1019 aa11.74□□□□□ -0.53
ATL1-202ENST00000441560 CNPY2Q9Y2B0 182 aa11.74□□□□□ -0.53
ATL1-202ENST00000441560 SPAG9O60271 1321 aaKnown RBP11.74□□□□□ -0.53
ATL1-202ENST00000441560 DNAJC21Q5F1R6 531 aaKnown RBP11.74□□□□□ -0.53
ATL1-202ENST00000441560 CASC1Q6TDU7 716 aa11.74□□□□□ -0.53
ATL1-202ENST00000441560 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
ATL1-202ENST00000441560 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.74□□□□□ -0.53
ATL1-202ENST00000441560 C9orf84Q5VXU9 1444 aa11.74□□□□□ -0.53
ATL1-202ENST00000441560 TEX35Q5T0J7 233 aa11.73□□□□□ -0.53
ATL1-202ENST00000441560 CCDC191Q8NCU4 936 aa11.73□□□□□ -0.53
ATL1-202ENST00000441560 PRG4Q92954 1404 aaPredicted RBP11.73□□□□□ -0.53
ATL1-202ENST00000441560 ADCY10Q96PN6 1610 aa11.73□□□□□ -0.53
ATL1-202ENST00000441560 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
ATL1-202ENST00000441560 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.53
ATL1-202ENST00000441560 TTC22Q5TAA0 569 aa11.73□□□□□ -0.53
ATL1-202ENST00000441560 SIRT2Q8IXJ6 389 aa11.73□□□□□ -0.53
ATL1-202ENST00000441560 C16orf71Q8IYS4 520 aaPredicted RBP11.73□□□□□ -0.53
ATL1-202ENST00000441560 BRMS1Q9HCU9 246 aa11.73□□□□□ -0.53
ATL1-202ENST00000441560 JRKLQ9Y4A0 524 aa11.73□□□□□ -0.53
ATL1-202ENST00000441560 LRRFIP2Q9Y608 721 aaKnown RBP11.73□□□□□ -0.53
ATL1-202ENST00000441560 ZSCAN25Q6NSZ9 544 aa11.73□□□□□ -0.53
ATL1-202ENST00000441560 TXLNBQ8N3L3 684 aa11.73□□□□□ -0.53
ATL1-202ENST00000441560 PTPRGP23470 1445 aa11.73□□□□□ -0.53
ATL1-202ENST00000441560 EIF2AK4Q9P2K8 1649 aaKnown RBP11.72□□□□□ -0.53
ATL1-202ENST00000441560 ERO1AQ96HE7 468 aa11.72□□□□□ -0.53
ATL1-202ENST00000441560 FUCA2Q9BTY2 467 aa11.72□□□□□ -0.53
ATL1-202ENST00000441560 STK26Q9P289 416 aa11.72□□□□□ -0.53
ATL1-202ENST00000441560 GPATCH8Q9UKJ3 1502 aaKnown RBP11.72□□□□□ -0.53
ATL1-202ENST00000441560 ZBTB7BO15156 539 aaPredicted RBP11.72□□□□□ -0.53
ATL1-202ENST00000441560 FIBPO43427 364 aa11.72□□□□□ -0.53
ATL1-202ENST00000441560 HTATSF1O43719 755 aaKnown RBP11.72□□□□□ -0.53
ATL1-202ENST00000441560 SATB1Q01826 763 aa11.72□□□□□ -0.53
ATL1-202ENST00000441560 MUM1L1Q5H9M0 696 aa11.72□□□□□ -0.53
ATL1-202ENST00000441560 FHOD1Q9Y613 1164 aa11.72□□□□□ -0.53
ATL1-202ENST00000441560 UBE2HP62256 183 aa11.71□□□□□ -0.53
ATL1-202ENST00000441560 ZSCAN26Q16670 478 aa11.71□□□□□ -0.53
ATL1-202ENST00000441560 SLFNL1Q499Z3 407 aa11.71□□□□□ -0.53
ATL1-202ENST00000441560 SRCIN1Q9C0H9 1055 aa11.71□□□□□ -0.53
ATL1-202ENST00000441560 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.53
ATL1-202ENST00000441560 NOS1P29475 1434 aa11.71□□□□□ -0.53
ATL1-202ENST00000441560 NUP160Q12769 1436 aa11.71□□□□□ -0.53
ATL1-202ENST00000441560 IRF6O14896 467 aa11.71□□□□□ -0.54
ATL1-202ENST00000441560 SDSP20132 328 aa11.71□□□□□ -0.54
ATL1-202ENST00000441560 MTHFSP49914 203 aa11.71□□□□□ -0.54
ATL1-202ENST00000441560 ST5P78524 1137 aa11.71□□□□□ -0.54
ATL1-202ENST00000441560 LUZP1Q86V48 1076 aa11.71□□□□□ -0.54
ATL1-202ENST00000441560 PLA2R1Q13018 1463 aa11.71□□□□□ -0.54
ATL1-202ENST00000441560 PLB1Q6P1J6 1458 aa11.71□□□□□ -0.54
ATL1-202ENST00000441560 CROCC2H7BZ55 1655 aa11.71□□□□□ -0.54
ATL1-202ENST00000441560 PTPN14Q15678 1187 aa11.7□□□□□ -0.54
ATL1-202ENST00000441560 OTUD7AQ8TE49 926 aaPredicted RBP11.7□□□□□ -0.54
ATL1-202ENST00000441560 TRIM5Q9C035 493 aa11.7□□□□□ -0.54
ATL1-202ENST00000441560 USP27XA6NNY8 438 aa11.7□□□□□ -0.54
ATL1-202ENST00000441560 PNMA6AP0CW24 399 aaPredicted RBP11.7□□□□□ -0.54
ATL1-202ENST00000441560 CCDC192P0DO97 292 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms