RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PPIP5K1Q6PFW1 1433 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 SYTL4Q96C24 671 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-214ENST00000441542 TRPM1Q7Z4N2 1603 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 ZMYM3Q14202 1370 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 ZBTB7BO15156 539 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-214ENST00000441542 TTC22Q5TAA0 569 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 CLEC17AQ6ZS10 378 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 ADGRF5Q8IZF2 1346 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 NCBP1Q09161 790 aaKnown RBP9.07□□□□□ -0.96
HDAC9-214ENST00000441542 FBXW7Q969H0 707 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 CHMP4CQ96CF2 233 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 KCNF1Q9H3M0 494 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 CABP2Q9NPB3 220 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 PALD1Q9ULE6 856 aa9.07□□□□□ -0.96
HDAC9-214ENST00000441542 AP5Z1O43299 807 aa9.06□□□□□ -0.96
HDAC9-214ENST00000441542 TNNT1P13805 278 aa9.06□□□□□ -0.96
HDAC9-214ENST00000441542 TPD52L1Q16890 204 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-214ENST00000441542 STK26Q9P289 416 aa9.06□□□□□ -0.96
HDAC9-214ENST00000441542 KIAA0556O60303 1618 aa9.06□□□□□ -0.96
HDAC9-214ENST00000441542 POLR3AO14802 1390 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-214ENST00000441542 MAP4K4O95819 1239 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-214ENST00000441542 TNNT3P45378 269 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-214ENST00000441542 KRT24Q2M2I5 525 aa9.06□□□□□ -0.96
HDAC9-214ENST00000441542 CCDC186Q7Z3E2 898 aa9.06□□□□□ -0.96
HDAC9-214ENST00000441542 OGFRQ9NZT2 677 aa9.06□□□□□ -0.96
HDAC9-214ENST00000441542 NRBP1Q9UHY1 535 aa9.06□□□□□ -0.96
HDAC9-214ENST00000441542 SPAG9O60271 1321 aaKnown RBP9.05□□□□□ -0.96
HDAC9-214ENST00000441542 SLC4A10Q6U841 1118 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 CKAP2LQ8IYA6 745 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 TRMT1Q9NXH9 659 aaKnown RBP9.05□□□□□ -0.96
HDAC9-214ENST00000441542 PRDM15P57071 1507 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-214ENST00000441542 DISP1Q96F81 1524 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 KDM4AO75164 1064 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 REC8O95072 547 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 GRIPAP1Q4V328 841 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 CCDC112Q8NEF3 446 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 ADGRL2O95490 1459 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 GTF2F1P35269 517 aaKnown RBP eCLIP9.05□□□□□ -0.96
HDAC9-214ENST00000441542 DCTN1Q14203 1278 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 KIAA1524Q8TCG1 905 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 GTF3C6Q969F1 213 aa9.05□□□□□ -0.96
HDAC9-214ENST00000441542 VPS37CA5D8V6 355 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-214ENST00000441542 ERC2O15083 957 aa9.04□□□□□ -0.96
HDAC9-214ENST00000441542 LUZP1Q86V48 1076 aa9.04□□□□□ -0.96
HDAC9-214ENST00000441542 TIGD1Q96MW7 591 aa9.04□□□□□ -0.96
HDAC9-214ENST00000441542 PLCD4Q9BRC7 762 aa9.04□□□□□ -0.96
HDAC9-214ENST00000441542 REREQ9P2R6 1566 aa9.04□□□□□ -0.96
HDAC9-214ENST00000441542 POLR3GO15318 223 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-214ENST00000441542 PRKAR2BP31323 418 aa9.04□□□□□ -0.96
HDAC9-214ENST00000441542 CCDC183Q5T5S1 534 aa9.04□□□□□ -0.96
HDAC9-214ENST00000441542 FERMT3Q86UX7 667 aa9.04□□□□□ -0.96
HDAC9-214ENST00000441542 TRIM5Q9C035 493 aa9.04□□□□□ -0.96
HDAC9-214ENST00000441542 HECW2Q9P2P5 1572 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 BRD1O95696 1058 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 CPA1P15085 419 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 GORABQ5T7V8 394 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 SRCIN1Q9C0H9 1055 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 SCAF11Q99590 1463 aaKnown RBP9.03□□□□□ -0.96
HDAC9-214ENST00000441542 FAM173BQ6P4H8 233 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 EXOC6BQ9Y2D4 811 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 CCDC66A2RUB6 948 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 GOLGA6L6A8MZA4 724 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 SLFN14P0C7P3 912 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 CTNNA3Q9UI47 895 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 SYNMO15061 1565 aa9.03□□□□□ -0.96
HDAC9-214ENST00000441542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.02□□□□□ -0.97
HDAC9-214ENST00000441542 TAF3Q5VWG9 929 aa9.02□□□□□ -0.97
HDAC9-214ENST00000441542 ANKRD7Q92527 254 aa9.02□□□□□ -0.97
HDAC9-214ENST00000441542 FAM83GA6ND36 823 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 ELF2Q15723 593 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 FAM184AQ8NB25 1140 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 MX1P20591 662 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 MCCP23508 829 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 DNM1Q05193 864 aaKnown RBP9.01□□□□□ -0.97
HDAC9-214ENST00000441542 ARID5BQ14865 1188 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 TWISTNBQ3B726 338 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-214ENST00000441542 CC2D2BQ6DHV5 1058 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 KRT222Q8N1A0 295 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.01□□□□□ -0.97
HDAC9-214ENST00000441542 FEZ1Q99689 392 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 SPTLC3Q9NUV7 552 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 TERF2Q15554 542 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 FILIP1Q7Z7B0 1213 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
HDAC9-214ENST00000441542 C8orf58Q8NAV2 365 aa9.01□□□□□ -0.97
HDAC9-214ENST00000441542 ZNF215Q9UL58 517 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-214ENST00000441542 ASXL2Q76L83 1435 aa9□□□□□ -0.97
HDAC9-214ENST00000441542 A0A087WWV3 80 aa9□□□□□ -0.97
HDAC9-214ENST00000441542 DIAPH1O60610 1272 aaKnown RBP9□□□□□ -0.97
HDAC9-214ENST00000441542 NEK11Q8NG66 645 aa9□□□□□ -0.97
HDAC9-214ENST00000441542 PHACTR3Q96KR7 559 aa9□□□□□ -0.97
HDAC9-214ENST00000441542 KCNG1Q9UIX4 513 aa9□□□□□ -0.97
HDAC9-214ENST00000441542 WDR33Q9C0J8 1336 aaKnown RBP9□□□□□ -0.97
HDAC9-214ENST00000441542 SCAPERQ9BY12 1400 aa9□□□□□ -0.97
HDAC9-214ENST00000441542 VAMP4O75379 141 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 CT47B1P0C2W7 299 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-214ENST00000441542 CAPN2P17655 700 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 FOSBP53539 338 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 UVSSAQ2YD98 709 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 KIF18AQ8NI77 898 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms