RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 COL3A1P02461 1466 aaPredicted RBP14.73□□□□□ -0.05
LTBR-203ENST00000441074 K7ELQ4 463 aaPredicted RBP14.73□□□□□ -0.05
LTBR-203ENST00000441074 TRIM27P14373 513 aa14.73□□□□□ -0.05
LTBR-203ENST00000441074 KNDC1Q76NI1 1749 aa14.73□□□□□ -0.05
LTBR-203ENST00000441074 ZNF500O60304 480 aaPredicted RBP14.72□□□□□ -0.05
LTBR-203ENST00000441074 ZNF445P59923 1031 aa14.72□□□□□ -0.05
LTBR-203ENST00000441074 COG3Q96JB2 828 aa14.72□□□□□ -0.05
LTBR-203ENST00000441074 ITPRIPQ8IWB1 547 aa14.72□□□□□ -0.05
LTBR-203ENST00000441074 SMC4Q9NTJ3 1288 aa14.72□□□□□ -0.05
LTBR-203ENST00000441074 DDX49Q9Y6V7 483 aaKnown RBP14.72□□□□□ -0.05
LTBR-203ENST00000441074 TTC21BQ7Z4L5 1316 aa14.72□□□□□ -0.05
LTBR-203ENST00000441074 EDC4Q6P2E9 1401 aaKnown RBP14.72□□□□□ -0.05
LTBR-203ENST00000441074 HMOX1P09601 288 aa14.71□□□□□ -0.05
LTBR-203ENST00000441074 SSFA2P28290 1259 aa14.71□□□□□ -0.05
LTBR-203ENST00000441074 RBM10P98175 930 aaKnown RBP14.71□□□□□ -0.05
LTBR-203ENST00000441074 BMP2KLQ5H9B9 411 aa14.71□□□□□ -0.05
LTBR-203ENST00000441074 ATF7IPQ6VMQ6 1270 aa14.71□□□□□ -0.05
LTBR-203ENST00000441074 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.05
LTBR-203ENST00000441074 PLEKHG3A1L390 1219 aa14.71□□□□□ -0.05
LTBR-203ENST00000441074 ZBTB40Q9NUA8 1239 aa14.71□□□□□ -0.05
LTBR-203ENST00000441074 DIAPH1O60610 1272 aaKnown RBP14.7□□□□□ -0.06
LTBR-203ENST00000441074 BAG4O95429 457 aaKnown RBP14.7□□□□□ -0.06
LTBR-203ENST00000441074 CERKQ8TCT0 537 aa14.7□□□□□ -0.06
LTBR-203ENST00000441074 PLEKHF1Q96S99 279 aa14.7□□□□□ -0.06
LTBR-203ENST00000441074 C19orf44Q9H6X5 657 aa14.7□□□□□ -0.06
LTBR-203ENST00000441074 R3HCC1Q9Y3T6 440 aaKnown RBP14.7□□□□□ -0.06
LTBR-203ENST00000441074 CD2BP2O95400 341 aaKnown RBP14.7□□□□□ -0.06
LTBR-203ENST00000441074 TMPOP42166 694 aaKnown RBP14.7□□□□□ -0.06
LTBR-203ENST00000441074 MTERF4Q7Z6M4 381 aaKnown RBP14.7□□□□□ -0.06
LTBR-203ENST00000441074 KIF16BQ96L93 1317 aa14.7□□□□□ -0.06
LTBR-203ENST00000441074 CHD1LQ86WJ1 897 aa14.69□□□□□ -0.06
LTBR-203ENST00000441074 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
LTBR-203ENST00000441074 XIRP1Q702N8 1843 aaKnown RBP14.69□□□□□ -0.06
LTBR-203ENST00000441074 XPCQ01831 940 aaPredicted RBP14.69□□□□□ -0.06
LTBR-203ENST00000441074 SSH1Q8WYL5 1049 aa14.69□□□□□ -0.06
LTBR-203ENST00000441074 PDLIM2Q96JY6 352 aa14.69□□□□□ -0.06
LTBR-203ENST00000441074 FAM13BQ9NYF5 915 aa14.69□□□□□ -0.06
LTBR-203ENST00000441074 MSH6P52701 1360 aa14.69□□□□□ -0.06
LTBR-203ENST00000441074 EXOSC9Q06265 439 aaKnown RBP14.68□□□□□ -0.06
LTBR-203ENST00000441074 GAS2L2Q8NHY3 880 aa14.68□□□□□ -0.06
LTBR-203ENST00000441074 CDC42BPGQ6DT37 1551 aa14.68□□□□□ -0.06
LTBR-203ENST00000441074 ADGRL3Q9HAR2 1447 aa14.68□□□□□ -0.06
LTBR-203ENST00000441074 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
LTBR-203ENST00000441074 LNPKQ9C0E8 428 aa14.67□□□□□ -0.06
LTBR-203ENST00000441074 ATF3P18847 181 aa14.67□□□□□ -0.06
LTBR-203ENST00000441074 TMEM57Q8N5G2 664 aa14.67□□□□□ -0.06
LTBR-203ENST00000441074 TSR2Q969E8 191 aaKnown RBP14.67□□□□□ -0.06
LTBR-203ENST00000441074 NOB1Q9ULX3 412 aaKnown RBP14.67□□□□□ -0.06
LTBR-203ENST00000441074 TRIM35Q9UPQ4 493 aa14.67□□□□□ -0.06
LTBR-203ENST00000441074 MCM5P33992 734 aa14.66□□□□□ -0.06
LTBR-203ENST00000441074 CSPP1Q1MSJ5 1256 aa14.66□□□□□ -0.06
LTBR-203ENST00000441074 ESCO1Q5FWF5 840 aa14.66□□□□□ -0.06
LTBR-203ENST00000441074 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.66□□□□□ -0.06
LTBR-203ENST00000441074 USP6P35125 1406 aa14.66□□□□□ -0.06
LTBR-203ENST00000441074 NALCNQ8IZF0 1738 aa14.66□□□□□ -0.06
LTBR-203ENST00000441074 DYNC1I1O14576 645 aa14.66□□□□□ -0.06
LTBR-203ENST00000441074 SMAP1Q8IYB5 467 aaPredicted RBP14.66□□□□□ -0.06
LTBR-203ENST00000441074 ZNF428Q96B54 188 aa14.66□□□□□ -0.06
LTBR-203ENST00000441074 PHACTR3Q96KR7 559 aa14.66□□□□□ -0.06
LTBR-203ENST00000441074 ORAI2Q96SN7 254 aa14.66□□□□□ -0.06
LTBR-203ENST00000441074 UQCRHLA0A096LP55 91 aa14.65□□□□□ -0.06
LTBR-203ENST00000441074 UQCRHP07919 91 aa14.65□□□□□ -0.06
LTBR-203ENST00000441074 ALDH1L2Q3SY69 923 aa14.65□□□□□ -0.06
LTBR-203ENST00000441074 HSP90AB2PQ58FF8 381 aa14.65□□□□□ -0.06
LTBR-203ENST00000441074 PNPLA6Q8IY17 1366 aa14.65□□□□□ -0.06
LTBR-203ENST00000441074 PRKAR2BP31323 418 aa14.65□□□□□ -0.06
LTBR-203ENST00000441074 ZSCAN23Q3MJ62 389 aa14.65□□□□□ -0.06
LTBR-203ENST00000441074 CADPS2Q86UW7 1296 aa14.65□□□□□ -0.06
LTBR-203ENST00000441074 NUCB2P80303 420 aa14.64□□□□□ -0.07
LTBR-203ENST00000441074 RBSNQ9H1K0 784 aa14.64□□□□□ -0.07
LTBR-203ENST00000441074 CHMP4BQ9H444 224 aaKnown RBP14.64□□□□□ -0.07
LTBR-203ENST00000441074 NLRP6P59044 892 aa14.64□□□□□ -0.07
LTBR-203ENST00000441074 TBC1D9Q6ZT07 1266 aa14.64□□□□□ -0.07
LTBR-203ENST00000441074 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
LTBR-203ENST00000441074 ZKSCAN5Q9Y2L8 839 aa14.64□□□□□ -0.07
LTBR-203ENST00000441074 KIF20BQ96Q89 1820 aa14.63□□□□□ -0.07
LTBR-203ENST00000441074 IL13P35225 146 aa14.63□□□□□ -0.07
LTBR-203ENST00000441074 LMBRD1Q9NUN5 540 aa14.63□□□□□ -0.07
LTBR-203ENST00000441074 PODXL2Q9NZ53 605 aa14.63□□□□□ -0.07
LTBR-203ENST00000441074 UBAP1LF5GYI3 381 aa14.63□□□□□ -0.07
LTBR-203ENST00000441074 FOXO3O43524 673 aa14.63□□□□□ -0.07
LTBR-203ENST00000441074 BRPF1P55201 1214 aaPredicted RBP14.63□□□□□ -0.07
LTBR-203ENST00000441074 MCTP1Q6DN14 999 aa14.63□□□□□ -0.07
LTBR-203ENST00000441074 CAVIN1Q6NZI2 390 aaKnown RBP14.63□□□□□ -0.07
LTBR-203ENST00000441074 AEBP1Q8IUX7 1158 aa14.63□□□□□ -0.07
LTBR-203ENST00000441074 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
LTBR-203ENST00000441074 ABTB2Q8N961 1025 aa14.62□□□□□ -0.07
LTBR-203ENST00000441074 THUMPD2Q9BTF0 503 aaKnown RBP14.62□□□□□ -0.07
LTBR-203ENST00000441074 CYP2E1P05181 493 aaPredicted RBP14.61□□□□□ -0.07
LTBR-203ENST00000441074 SLAIN2Q9P270 581 aa14.61□□□□□ -0.07
LTBR-203ENST00000441074 PHF8Q9UPP1 1060 aa14.61□□□□□ -0.07
LTBR-203ENST00000441074 NCLP19338 710 aaKnown RBP14.61□□□□□ -0.07
LTBR-203ENST00000441074 SASS6Q6UVJ0 657 aa14.61□□□□□ -0.07
LTBR-203ENST00000441074 DDX17Q92841 729 aaKnown RBP14.61□□□□□ -0.07
LTBR-203ENST00000441074 SSH2Q76I76 1423 aa14.61□□□□□ -0.07
LTBR-203ENST00000441074 TOM1O60784 492 aa14.6□□□□□ -0.07
LTBR-203ENST00000441074 RABEP1Q15276 862 aa14.6□□□□□ -0.07
LTBR-203ENST00000441074 ANKRD45Q5TZF3 282 aa14.6□□□□□ -0.07
LTBR-203ENST00000441074 RGPD8O14715 1765 aaPredicted RBP14.6□□□□□ -0.07
LTBR-203ENST00000441074 FCHSD2O94868 740 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms