RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 ADAMTS19Q8TE59 1207 aa7.41□□□□□ -1.22
PGBD4P3-201ENST00000440731 GLMNQ92990 594 aa7.41□□□□□ -1.22
PGBD4P3-201ENST00000440731 TSEN34Q9BSV6 310 aaKnown RBP7.41□□□□□ -1.22
PGBD4P3-201ENST00000440731 MYCP01106 439 aaPredicted RBP7.4□□□□□ -1.22
PGBD4P3-201ENST00000440731 CC2D2BQ6DHV5 1058 aa7.4□□□□□ -1.22
PGBD4P3-201ENST00000440731 Q6ZVU0 165 aa7.4□□□□□ -1.22
PGBD4P3-201ENST00000440731 PHTF2Q8N3S3 785 aa7.4□□□□□ -1.22
PGBD4P3-201ENST00000440731 PLPP7Q8NBV4 271 aa7.4□□□□□ -1.22
PGBD4P3-201ENST00000440731 TRIM52Q96A61 297 aa7.4□□□□□ -1.22
PGBD4P3-201ENST00000440731 SNRPBP14678 240 aaKnown RBP7.39□□□□□ -1.23
PGBD4P3-201ENST00000440731 CCDC125Q86Z20 511 aa7.39□□□□□ -1.23
PGBD4P3-201ENST00000440731 SENP2Q9HC62 589 aa7.39□□□□□ -1.23
PGBD4P3-201ENST00000440731 FIGNL2A6NMB9 653 aa7.38□□□□□ -1.23
PGBD4P3-201ENST00000440731 SOBPA7XYQ1 873 aa7.38□□□□□ -1.23
PGBD4P3-201ENST00000440731 ATP5J2-PTCD1G3V325 749 aa7.38□□□□□ -1.23
PGBD4P3-201ENST00000440731 ADH1AP07327 375 aa7.38□□□□□ -1.23
PGBD4P3-201ENST00000440731 ERVK-9P63128 1117 aa7.38□□□□□ -1.23
PGBD4P3-201ENST00000440731 USP4Q13107 963 aa7.38□□□□□ -1.23
PGBD4P3-201ENST00000440731 DEPDC4Q8N2C3 294 aa7.38□□□□□ -1.23
PGBD4P3-201ENST00000440731 INSM2Q96T92 566 aaPredicted RBP7.38□□□□□ -1.23
PGBD4P3-201ENST00000440731 POLMQ9NP87 494 aaPredicted RBP7.38□□□□□ -1.23
PGBD4P3-201ENST00000440731 MEN1O00255 615 aa7.37□□□□□ -1.23
PGBD4P3-201ENST00000440731 ARID3CA6NKF2 412 aa7.36□□□□□ -1.23
PGBD4P3-201ENST00000440731 MAN1A2O60476 641 aa7.36□□□□□ -1.23
PGBD4P3-201ENST00000440731 PTGIRP43119 386 aa7.36□□□□□ -1.23
PGBD4P3-201ENST00000440731 MAP7D1Q3KQU3 841 aa7.36□□□□□ -1.23
PGBD4P3-201ENST00000440731 TBC1D9Q6ZT07 1266 aa7.36□□□□□ -1.23
PGBD4P3-201ENST00000440731 KIFC2Q96AC6 838 aa7.36□□□□□ -1.23
PGBD4P3-201ENST00000440731 TRIM47Q96LD4 638 aa7.36□□□□□ -1.23
PGBD4P3-201ENST00000440731 OSBPL3Q9H4L5 887 aa7.36□□□□□ -1.23
PGBD4P3-201ENST00000440731 RAB6BQ9NRW1 208 aa7.36□□□□□ -1.23
PGBD4P3-201ENST00000440731 CTSOP43234 321 aaPredicted RBP7.35□□□□□ -1.23
PGBD4P3-201ENST00000440731 CYP2U1Q7Z449 544 aa7.35□□□□□ -1.23
PGBD4P3-201ENST00000440731 ZSCAN1Q8NBB4 408 aa7.35□□□□□ -1.23
PGBD4P3-201ENST00000440731 ARHGEF10LQ9HCE6 1279 aa7.35□□□□□ -1.23
PGBD4P3-201ENST00000440731 A0A1W2PRU2 124 aa7.34□□□□□ -1.23
PGBD4P3-201ENST00000440731 TTLL8A6PVC2 850 aa7.34□□□□□ -1.23
PGBD4P3-201ENST00000440731 STAU1O95793 577 aaKnown RBP7.34□□□□□ -1.23
PGBD4P3-201ENST00000440731 NCOA4Q13772 614 aa7.34□□□□□ -1.23
PGBD4P3-201ENST00000440731 EML3Q32P44 896 aa7.34□□□□□ -1.23
PGBD4P3-201ENST00000440731 KDF1Q8NAX2 398 aaPredicted RBP7.34□□□□□ -1.23
PGBD4P3-201ENST00000440731 SIRT1Q96EB6 747 aa7.34□□□□□ -1.23
PGBD4P3-201ENST00000440731 NLRP3Q96P20 1036 aa7.34□□□□□ -1.23
PGBD4P3-201ENST00000440731 UCN2Q96RP3 112 aa7.34□□□□□ -1.23
PGBD4P3-201ENST00000440731 TFIP11Q9UBB9 837 aaKnown RBP7.34□□□□□ -1.23
PGBD4P3-201ENST00000440731 USP17L5A8MUK1 530 aa7.33□□□□□ -1.24
PGBD4P3-201ENST00000440731 SPINT1O43278 529 aa7.33□□□□□ -1.24
PGBD4P3-201ENST00000440731 ATP9BO43861 1147 aa7.32□□□□□ -1.24
PGBD4P3-201ENST00000440731 PSME1Q06323 249 aa7.32□□□□□ -1.24
PGBD4P3-201ENST00000440731 SLC16A10Q8TF71 515 aa7.32□□□□□ -1.24
PGBD4P3-201ENST00000440731 CHIC2Q9UKJ5 165 aa7.32□□□□□ -1.24
PGBD4P3-201ENST00000440731 NOD1Q9Y239 953 aa7.32□□□□□ -1.24
PGBD4P3-201ENST00000440731 SOS2Q07890 1332 aaPredicted RBP7.31□□□□□ -1.24
PGBD4P3-201ENST00000440731 PALM3A6NDB9 673 aaPredicted RBP7.31□□□□□ -1.24
PGBD4P3-201ENST00000440731 RFX1P22670 979 aa7.31□□□□□ -1.24
PGBD4P3-201ENST00000440731 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
PGBD4P3-201ENST00000440731 LMOD1P29536 600 aaPredicted RBP7.31□□□□□ -1.24
PGBD4P3-201ENST00000440731 GMPRP36959 345 aa7.31□□□□□ -1.24
PGBD4P3-201ENST00000440731 SLC27A3Q5K4L6 730 aa7.31□□□□□ -1.24
PGBD4P3-201ENST00000440731 PRICKLE2Q7Z3G6 844 aa7.31□□□□□ -1.24
PGBD4P3-201ENST00000440731 NFATC2IPQ8NCF5 419 aa7.31□□□□□ -1.24
PGBD4P3-201ENST00000440731 DNMT3LQ9UJW3 386 aa7.31□□□□□ -1.24
PGBD4P3-201ENST00000440731 USP17L3A6NCW0 530 aa7.3□□□□□ -1.24
PGBD4P3-201ENST00000440731 USP17L4A6NCW7 530 aa7.3□□□□□ -1.24
PGBD4P3-201ENST00000440731 GNRH1P01148 92 aa7.3□□□□□ -1.24
PGBD4P3-201ENST00000440731 USP17L2Q6R6M4 530 aa7.3□□□□□ -1.24
PGBD4P3-201ENST00000440731 USP17L1Q7RTZ2 530 aa7.3□□□□□ -1.24
PGBD4P3-201ENST00000440731 PPP1R12CQ9BZL4 782 aa7.3□□□□□ -1.24
PGBD4P3-201ENST00000440731 VEGFBP49765 207 aa7.29□□□□□ -1.24
PGBD4P3-201ENST00000440731 GTF2IP78347 998 aa7.29□□□□□ -1.24
PGBD4P3-201ENST00000440731 CNKSR1Q969H4 720 aa7.29□□□□□ -1.24
PGBD4P3-201ENST00000440731 MKRN1Q9UHC7 482 aaKnown RBP7.29□□□□□ -1.24
PGBD4P3-201ENST00000440731 SERTAD1Q9UHV2 236 aa7.29□□□□□ -1.24
PGBD4P3-201ENST00000440731 LZTS3O60299 673 aaPredicted RBP7.28□□□□□ -1.24
PGBD4P3-201ENST00000440731 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.28□□□□□ -1.24
PGBD4P3-201ENST00000440731 CDCA8Q53HL2 280 aa7.28□□□□□ -1.24
PGBD4P3-201ENST00000440731 ESCO1Q5FWF5 840 aa7.28□□□□□ -1.24
PGBD4P3-201ENST00000440731 FOXD4L5Q5VV16 416 aaPredicted RBP7.28□□□□□ -1.24
PGBD4P3-201ENST00000440731 RNF217Q8TC41 542 aa7.28□□□□□ -1.24
PGBD4P3-201ENST00000440731 ETNK1Q9HBU6 452 aa7.28□□□□□ -1.24
PGBD4P3-201ENST00000440731 IL2RAP01589 272 aa7.27□□□□□ -1.25
PGBD4P3-201ENST00000440731 RHOQP17081 205 aa7.27□□□□□ -1.25
PGBD4P3-201ENST00000440731 GDF10P55107 478 aa7.27□□□□□ -1.25
PGBD4P3-201ENST00000440731 CLN3Q13286 438 aa7.27□□□□□ -1.25
PGBD4P3-201ENST00000440731 LYSMD3Q7Z3D4 306 aa7.27□□□□□ -1.25
PGBD4P3-201ENST00000440731 ESYT1Q9BSJ8 1104 aa7.27□□□□□ -1.25
PGBD4P3-201ENST00000440731 TIMELESSQ9UNS1 1208 aa7.27□□□□□ -1.25
PGBD4P3-201ENST00000440731 MAFBQ9Y5Q3 323 aaPredicted RBP7.27□□□□□ -1.25
PGBD4P3-201ENST00000440731 SUPT5HO00267 1087 aaKnown RBP7.26□□□□□ -1.25
PGBD4P3-201ENST00000440731 GTF2E1P29083 439 aaPredicted RBP7.26□□□□□ -1.25
PGBD4P3-201ENST00000440731 RNF144AP50876 292 aaPredicted RBP7.26□□□□□ -1.25
PGBD4P3-201ENST00000440731 CENPCQ03188 943 aa7.26□□□□□ -1.25
PGBD4P3-201ENST00000440731 CCDC97Q96F63 343 aaPredicted RBP7.26□□□□□ -1.25
PGBD4P3-201ENST00000440731 ZNF594Q96JF6 807 aaPredicted RBP7.26□□□□□ -1.25
PGBD4P3-201ENST00000440731 PCDHGA11Q9Y5H2 935 aa7.26□□□□□ -1.25
PGBD4P3-201ENST00000440731 INHAP05111 366 aa7.25□□□□□ -1.25
PGBD4P3-201ENST00000440731 RASA1P20936 1047 aa7.25□□□□□ -1.25
PGBD4P3-201ENST00000440731 PTSQ03393 145 aa7.25□□□□□ -1.25
PGBD4P3-201ENST00000440731 POU4F2Q12837 409 aa7.25□□□□□ -1.25
PGBD4P3-201ENST00000440731 TMEM214Q6NUQ4 689 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms