RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 EIF2AK4Q9P2K8 1649 aaKnown RBP13.49□□□□□ -0.25
STRC-203ENST00000440125 SDSP20132 328 aa13.49□□□□□ -0.25
STRC-203ENST00000440125 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
STRC-203ENST00000440125 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
STRC-203ENST00000440125 YEATS2Q9ULM3 1422 aa13.49□□□□□ -0.25
STRC-203ENST00000440125 ANKRD36BQ8N2N9 1353 aa13.49□□□□□ -0.25
STRC-203ENST00000440125 CEBPZQ03701 1054 aaKnown RBP13.49□□□□□ -0.25
STRC-203ENST00000440125 PSME1Q06323 249 aa13.49□□□□□ -0.25
STRC-203ENST00000440125 STK3Q13188 491 aa13.49□□□□□ -0.25
STRC-203ENST00000440125 CCDC73Q6ZRK6 1079 aa13.49□□□□□ -0.25
STRC-203ENST00000440125 CYP46A1Q9Y6A2 500 aa13.49□□□□□ -0.25
STRC-203ENST00000440125 ZCCHC11Q5TAX3 1644 aaKnown RBP13.49□□□□□ -0.25
STRC-203ENST00000440125 INSRP06213 1382 aa13.49□□□□□ -0.25
STRC-203ENST00000440125 TSPOAP1O95153 1857 aa13.48□□□□□ -0.25
STRC-203ENST00000440125 CREBRFQ8IUR6 639 aa13.48□□□□□ -0.25
STRC-203ENST00000440125 NPC1L1Q9UHC9 1359 aa13.48□□□□□ -0.25
STRC-203ENST00000440125 PSMA5P28066 241 aa13.48□□□□□ -0.25
STRC-203ENST00000440125 RAB3GAP1Q15042 981 aa13.48□□□□□ -0.25
STRC-203ENST00000440125 ZSCAN23Q3MJ62 389 aa13.48□□□□□ -0.25
STRC-203ENST00000440125 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
STRC-203ENST00000440125 JAKMIP1Q96N16 626 aaKnown RBP13.48□□□□□ -0.25
STRC-203ENST00000440125 MEIS3Q99687 375 aa13.48□□□□□ -0.25
STRC-203ENST00000440125 TTC37Q6PGP7 1564 aa13.48□□□□□ -0.25
STRC-203ENST00000440125 FERMT3Q86UX7 667 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 MRPL50Q8N5N7 158 aaKnown RBP13.47□□□□□ -0.25
STRC-203ENST00000440125 NEUROD6Q96NK8 337 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 PDCP20941 246 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
STRC-203ENST00000440125 ARHGAP45Q92619 1136 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 MAGI2Q86UL8 1455 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 VAMP4O75379 141 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 CCDC192P0DO97 292 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 HSPA2P54652 639 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 SIL1Q9H173 461 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 CPLX1O14810 134 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 CCAR2Q8N163 923 aaKnown RBP13.47□□□□□ -0.25
STRC-203ENST00000440125 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 SDF4Q9BRK5 362 aa13.47□□□□□ -0.25
STRC-203ENST00000440125 TTC5Q8N0Z6 440 aa13.46□□□□□ -0.25
STRC-203ENST00000440125 ZNF521Q96K83 1311 aa13.46□□□□□ -0.26
STRC-203ENST00000440125 TPD52L1Q16890 204 aaPredicted RBP13.46□□□□□ -0.26
STRC-203ENST00000440125 USP25Q9UHP3 1055 aa13.46□□□□□ -0.26
STRC-203ENST00000440125 CASTP20810 708 aaKnown RBP13.45□□□□□ -0.26
STRC-203ENST00000440125 KRT85P78386 507 aa13.45□□□□□ -0.26
STRC-203ENST00000440125 CCDC83Q8IWF9 413 aa13.45□□□□□ -0.26
STRC-203ENST00000440125 TRMT2AQ8IZ69 625 aaKnown RBP13.45□□□□□ -0.26
STRC-203ENST00000440125 UBE2Q2Q8WVN8 375 aa13.45□□□□□ -0.26
STRC-203ENST00000440125 PDRG1Q9NUG6 133 aa13.45□□□□□ -0.26
STRC-203ENST00000440125 LRRFIP2Q9Y608 721 aaKnown RBP13.45□□□□□ -0.26
STRC-203ENST00000440125 TULP1O00294 542 aaPredicted RBP13.44□□□□□ -0.26
STRC-203ENST00000440125 TPM3P06753 285 aa13.44□□□□□ -0.26
STRC-203ENST00000440125 KRT24Q2M2I5 525 aa13.44□□□□□ -0.26
STRC-203ENST00000440125 DNAJC2Q99543 621 aaKnown RBP13.44□□□□□ -0.26
STRC-203ENST00000440125 POLKQ9UBT6 870 aa13.44□□□□□ -0.26
STRC-203ENST00000440125 TMX3Q96JJ7 454 aa13.44□□□□□ -0.26
STRC-203ENST00000440125 TNMDQ9H2S6 317 aa13.44□□□□□ -0.26
STRC-203ENST00000440125 ZRANB1Q9UGI0 708 aa13.44□□□□□ -0.26
STRC-203ENST00000440125 MBD5Q9P267 1494 aa13.44□□□□□ -0.26
STRC-203ENST00000440125 ZGPATQ8N5A5 531 aaKnown RBP13.44□□□□□ -0.26
STRC-203ENST00000440125 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
STRC-203ENST00000440125 WASLO00401 505 aaPredicted RBP13.43□□□□□ -0.26
STRC-203ENST00000440125 ANKRD44Q8N8A2 993 aa13.43□□□□□ -0.26
STRC-203ENST00000440125 TRIM35Q9UPQ4 493 aa13.43□□□□□ -0.26
STRC-203ENST00000440125 ZBTB7BO15156 539 aaPredicted RBP13.43□□□□□ -0.26
STRC-203ENST00000440125 PRIM1P49642 420 aaKnown RBP13.43□□□□□ -0.26
STRC-203ENST00000440125 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
STRC-203ENST00000440125 AACSQ86V21 672 aa13.43□□□□□ -0.26
STRC-203ENST00000440125 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
STRC-203ENST00000440125 BCORL1Q5H9F3 1711 aa13.43□□□□□ -0.26
STRC-203ENST00000440125 NPHP1O15259 732 aa13.43□□□□□ -0.26
STRC-203ENST00000440125 APPP05067 770 aa13.42□□□□□ -0.26
STRC-203ENST00000440125 CAMK4Q16566 473 aa13.42□□□□□ -0.26
STRC-203ENST00000440125 BLOC1S2Q6QNY1 142 aa13.42□□□□□ -0.26
STRC-203ENST00000440125 PLEKHM2Q8IWE5 1019 aa13.42□□□□□ -0.26
STRC-203ENST00000440125 CHMP4CQ96CF2 233 aa13.42□□□□□ -0.26
STRC-203ENST00000440125 PRPF40BQ6NWY9 871 aaKnown RBP13.42□□□□□ -0.26
STRC-203ENST00000440125 CCDC34Q96HJ3 373 aa13.42□□□□□ -0.26
STRC-203ENST00000440125 PDCL3Q9H2J4 239 aa13.42□□□□□ -0.26
STRC-203ENST00000440125 KINO60870 393 aaKnown RBP13.42□□□□□ -0.26
STRC-203ENST00000440125 FLIIQ13045 1269 aa13.42□□□□□ -0.26
STRC-203ENST00000440125 CPLX2Q6PUV4 134 aaKnown RBP13.42□□□□□ -0.26
STRC-203ENST00000440125 KIF1BPQ96EK5 621 aa13.42□□□□□ -0.26
STRC-203ENST00000440125 ADCY10Q96PN6 1610 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 ATP7AQ04656 1500 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 ZNF530Q6P9A1 599 aaPredicted RBP13.41□□□□□ -0.26
STRC-203ENST00000440125 SPG7Q9UQ90 795 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 TNRQ92752 1358 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 ATF3P18847 181 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 PDE1AP54750 535 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 ERC1Q8IUD2 1116 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 NUP62CLQ9H1M0 184 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 DCTPP1Q9H773 170 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 RIMBP3CA6NJZ7 1639 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 RIMBP3BA6NNM3 1639 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 RIMBP3Q9UFD9 1639 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 PTPRCP08575 1304 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 GNAT3A8MTJ3 354 aa13.41□□□□□ -0.26
STRC-203ENST00000440125 KDM4AO75164 1064 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms