RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 DDX54Q8TDD1 881 aaKnown RBP14.16□□□□□ -0.14
UBE2F-213ENST00000439780 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
UBE2F-213ENST00000439780 SHANK3Q9BYB0 1731 aa14.15□□□□□ -0.14
UBE2F-213ENST00000439780 BCL9O00512 1426 aa14.15□□□□□ -0.14
UBE2F-213ENST00000439780 DIAPH1O60610 1272 aaKnown RBP14.14□□□□□ -0.15
UBE2F-213ENST00000439780 SBF2Q86WG5 1849 aa14.13□□□□□ -0.15
UBE2F-213ENST00000439780 TNS1Q9HBL0 1735 aaKnown RBP14.13□□□□□ -0.15
UBE2F-213ENST00000439780 CYP27B1O15528 508 aa14.13□□□□□ -0.15
UBE2F-213ENST00000439780 KCNQ2O43526 872 aa14.13□□□□□ -0.15
UBE2F-213ENST00000439780 SULT6B1Q6IMI4 303 aa14.13□□□□□ -0.15
UBE2F-213ENST00000439780 ACSBG1Q96GR2 724 aa14.12□□□□□ -0.15
UBE2F-213ENST00000439780 KDRP35968 1356 aa14.11□□□□□ -0.15
UBE2F-213ENST00000439780 HMOX1P09601 288 aa14.11□□□□□ -0.15
UBE2F-213ENST00000439780 EN1Q05925 392 aaPredicted RBP14.11□□□□□ -0.15
UBE2F-213ENST00000439780 SF3B2Q13435 895 aaKnown RBP14.11□□□□□ -0.15
UBE2F-213ENST00000439780 RALBP1Q15311 655 aa14.11□□□□□ -0.15
UBE2F-213ENST00000439780 PKD1L3Q7Z443 1732 aa14.11□□□□□ -0.15
UBE2F-213ENST00000439780 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
UBE2F-213ENST00000439780 APBA3O96018 575 aa14.1□□□□□ -0.15
UBE2F-213ENST00000439780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.1□□□□□ -0.15
UBE2F-213ENST00000439780 PCDH11XQ9BZA7 1347 aa14.1□□□□□ -0.15
UBE2F-213ENST00000439780 PCDH11YQ9BZA8 1340 aa14.1□□□□□ -0.15
UBE2F-213ENST00000439780 U2SURPO15042 1029 aaKnown RBP14.09□□□□□ -0.15
UBE2F-213ENST00000439780 BAG6P46379 1132 aa14.09□□□□□ -0.15
UBE2F-213ENST00000439780 CFAP53Q96M91 514 aa14.09□□□□□ -0.15
UBE2F-213ENST00000439780 CAMKK2Q96RR4 588 aa14.09□□□□□ -0.15
UBE2F-213ENST00000439780 SPG7Q9UQ90 795 aa14.09□□□□□ -0.15
UBE2F-213ENST00000439780 PRIM1P49642 420 aaKnown RBP14.08□□□□□ -0.16
UBE2F-213ENST00000439780 EZH2Q15910 746 aaKnown RBP14.08□□□□□ -0.16
UBE2F-213ENST00000439780 PRKRIP1Q9H875 184 aaPredicted RBP14.08□□□□□ -0.16
UBE2F-213ENST00000439780 PHKG2P15735 406 aa14.07□□□□□ -0.16
UBE2F-213ENST00000439780 NKX1-1Q15270 411 aaPredicted RBP14.07□□□□□ -0.16
UBE2F-213ENST00000439780 NHSQ6T4R5 1651 aa14.07□□□□□ -0.16
UBE2F-213ENST00000439780 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
UBE2F-213ENST00000439780 MYBBP1AQ9BQG0 1328 aaKnown RBP14.06□□□□□ -0.16
UBE2F-213ENST00000439780 PLEKHG2Q9H7P9 1386 aa14.06□□□□□ -0.16
UBE2F-213ENST00000439780 DOT1LQ8TEK3 1739 aa14.05□□□□□ -0.16
UBE2F-213ENST00000439780 AMOTQ4VCS5 1084 aa14.05□□□□□ -0.16
UBE2F-213ENST00000439780 ZNF530Q6P9A1 599 aaPredicted RBP14.05□□□□□ -0.16
UBE2F-213ENST00000439780 IFNL2Q8IZJ0 200 aa14.05□□□□□ -0.16
UBE2F-213ENST00000439780 PROM2Q8N271 834 aa14.05□□□□□ -0.16
UBE2F-213ENST00000439780 PLSCR1O15162 318 aa14.04□□□□□ -0.16
UBE2F-213ENST00000439780 U2AF1L5P0DN76 240 aaPredicted RBP14.04□□□□□ -0.16
UBE2F-213ENST00000439780 U2AF1Q01081 240 aaKnown RBP eCLIP14.04□□□□□ -0.16
UBE2F-213ENST00000439780 SYTL4Q96C24 671 aaPredicted RBP14.04□□□□□ -0.16
UBE2F-213ENST00000439780 RSPH6AQ9H0K4 717 aa14.04□□□□□ -0.16
UBE2F-213ENST00000439780 NUDCQ9Y266 331 aa14.04□□□□□ -0.16
UBE2F-213ENST00000439780 TOGARAM1Q9Y4F4 1720 aa14.04□□□□□ -0.16
UBE2F-213ENST00000439780 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
UBE2F-213ENST00000439780 MTHFSDQ2M296 383 aaKnown RBP14.03□□□□□ -0.16
UBE2F-213ENST00000439780 PHACTR3Q96KR7 559 aa14.03□□□□□ -0.16
UBE2F-213ENST00000439780 BTAF1O14981 1849 aa14.03□□□□□ -0.16
UBE2F-213ENST00000439780 PRKAR2BP31323 418 aa14.02□□□□□ -0.17
UBE2F-213ENST00000439780 KDM6AO15550 1401 aaPredicted RBP14.01□□□□□ -0.17
UBE2F-213ENST00000439780 MPRIPQ6WCQ1 1025 aa14.01□□□□□ -0.17
UBE2F-213ENST00000439780 FCHSD2O94868 740 aa14□□□□□ -0.17
UBE2F-213ENST00000439780 TXNRD1Q16881 649 aa14□□□□□ -0.17
UBE2F-213ENST00000439780 PIGBQ92521 554 aa14□□□□□ -0.17
UBE2F-213ENST00000439780 RREB1Q92766 1687 aa14□□□□□ -0.17
UBE2F-213ENST00000439780 ITGB4P16144 1822 aa13.99□□□□□ -0.17
UBE2F-213ENST00000439780 CCDC184Q52MB2 194 aa13.99□□□□□ -0.17
UBE2F-213ENST00000439780 AKAP4Q5JQC9 854 aa13.99□□□□□ -0.17
UBE2F-213ENST00000439780 C1orf141Q5JVX7 400 aa13.99□□□□□ -0.17
UBE2F-213ENST00000439780 DCAF5Q96JK2 942 aa13.99□□□□□ -0.17
UBE2F-213ENST00000439780 LGR6Q9HBX8 967 aa13.99□□□□□ -0.17
UBE2F-213ENST00000439780 RGPD3A6NKT7 1758 aaPredicted RBP13.99□□□□□ -0.17
UBE2F-213ENST00000439780 RGPD4Q7Z3J3 1758 aa13.99□□□□□ -0.17
UBE2F-213ENST00000439780 HSP90AB1P08238 724 aaKnown RBP13.98□□□□□ -0.17
UBE2F-213ENST00000439780 KCNQ4P56696 695 aa13.98□□□□□ -0.17
UBE2F-213ENST00000439780 LRRC4BQ9NT99 713 aa13.98□□□□□ -0.17
UBE2F-213ENST00000439780 NUP188Q5SRE5 1749 aa13.98□□□□□ -0.17
UBE2F-213ENST00000439780 ERVV-2B6SEH9 535 aa13.97□□□□□ -0.17
UBE2F-213ENST00000439780 PLEKHF1Q96S99 279 aa13.97□□□□□ -0.17
UBE2F-213ENST00000439780 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.17
UBE2F-213ENST00000439780 ANO8Q9HCE9 1232 aaPredicted RBP13.96□□□□□ -0.17
UBE2F-213ENST00000439780 TMOD3Q9NYL9 352 aa13.96□□□□□ -0.17
UBE2F-213ENST00000439780 ASAP1Q9ULH1 1129 aa13.96□□□□□ -0.17
UBE2F-213ENST00000439780 PSDA5PKW4 1024 aaPredicted RBP13.95□□□□□ -0.18
UBE2F-213ENST00000439780 ANP32CO43423 234 aa13.95□□□□□ -0.18
UBE2F-213ENST00000439780 CABP4P57796 275 aa13.95□□□□□ -0.18
UBE2F-213ENST00000439780 NFATC2IPQ8NCF5 419 aa13.95□□□□□ -0.18
UBE2F-213ENST00000439780 IL17REQ8NFR9 667 aa13.95□□□□□ -0.18
UBE2F-213ENST00000439780 GAS2L2Q8NHY3 880 aa13.95□□□□□ -0.18
UBE2F-213ENST00000439780 SCN11AQ9UI33 1791 aa13.94□□□□□ -0.18
UBE2F-213ENST00000439780 LY75O60449 1722 aa13.94□□□□□ -0.18
UBE2F-213ENST00000439780 R3HDM1Q15032 1099 aaKnown RBP13.94□□□□□ -0.18
UBE2F-213ENST00000439780 ATG3Q9NT62 314 aa13.94□□□□□ -0.18
UBE2F-213ENST00000439780 ADAMTS7Q9UKP4 1686 aa13.94□□□□□ -0.18
UBE2F-213ENST00000439780 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
UBE2F-213ENST00000439780 MAP3K5Q99683 1374 aa13.94□□□□□ -0.18
UBE2F-213ENST00000439780 GNAT3A8MTJ3 354 aa13.93□□□□□ -0.18
UBE2F-213ENST00000439780 ADAMTS8Q9UP79 889 aa13.93□□□□□ -0.18
UBE2F-213ENST00000439780 SLC27A3Q5K4L6 730 aa13.92□□□□□ -0.18
UBE2F-213ENST00000439780 SMARCC1Q92922 1105 aaPredicted RBP13.92□□□□□ -0.18
UBE2F-213ENST00000439780 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
UBE2F-213ENST00000439780 PAPPAQ13219 1627 aa13.91□□□□□ -0.18
UBE2F-213ENST00000439780 ZNF827Q17R98 1081 aa13.91□□□□□ -0.18
UBE2F-213ENST00000439780 NBPF14Q5TI25 921 aa13.91□□□□□ -0.18
UBE2F-213ENST00000439780 CCDC146Q8IYE0 955 aa13.91□□□□□ -0.18
UBE2F-213ENST00000439780 SLC4A9Q96Q91 983 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms