RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ZNF500O60304 480 aaPredicted RBP10.95□□□□□ -0.66
COPB1-202ENST00000439561 FKBP5Q13451 457 aaPredicted RBP10.95□□□□□ -0.66
COPB1-202ENST00000439561 ARHGAP45Q92619 1136 aa10.95□□□□□ -0.66
COPB1-202ENST00000439561 POLKQ9UBT6 870 aa10.95□□□□□ -0.66
COPB1-202ENST00000439561 GADD45BO75293 160 aaPredicted RBP10.94□□□□□ -0.66
COPB1-202ENST00000439561 ADCY5O95622 1261 aa10.94□□□□□ -0.66
COPB1-202ENST00000439561 MLECQ14165 292 aa10.94□□□□□ -0.66
COPB1-202ENST00000439561 PLPPR3Q6T4P5 718 aa10.94□□□□□ -0.66
COPB1-202ENST00000439561 ANKRD44Q8N8A2 993 aa10.94□□□□□ -0.66
COPB1-202ENST00000439561 DDX54Q8TDD1 881 aaKnown RBP10.94□□□□□ -0.66
COPB1-202ENST00000439561 ZNF592Q92610 1267 aa10.94□□□□□ -0.66
COPB1-202ENST00000439561 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
COPB1-202ENST00000439561 SMC3Q9UQE7 1217 aa10.94□□□□□ -0.66
COPB1-202ENST00000439561 KIF3AQ9Y496 699 aa10.94□□□□□ -0.66
COPB1-202ENST00000439561 IQSEC2Q5JU85 1478 aa10.94□□□□□ -0.66
COPB1-202ENST00000439561 IQGAP1P46940 1657 aa10.94□□□□□ -0.66
COPB1-202ENST00000439561 AK9Q5TCS8 1911 aa10.93□□□□□ -0.66
COPB1-202ENST00000439561 MCM5P33992 734 aa10.93□□□□□ -0.66
COPB1-202ENST00000439561 IDI1Q13907 227 aa10.93□□□□□ -0.66
COPB1-202ENST00000439561 CEP85Q6P2H3 762 aa10.93□□□□□ -0.66
COPB1-202ENST00000439561 USP48Q86UV5 1035 aa10.93□□□□□ -0.66
COPB1-202ENST00000439561 HMGN5P82970 282 aaKnown RBP10.93□□□□□ -0.66
COPB1-202ENST00000439561 NOLC1Q14978 699 aaKnown RBP eCLIP10.93□□□□□ -0.666e-13■■■■□ 25.3
COPB1-202ENST00000439561 TSPYL4Q9UJ04 414 aa10.93□□□□□ -0.66
COPB1-202ENST00000439561 RNF17Q9BXT8 1623 aaKnown RBP10.93□□□□□ -0.66
COPB1-202ENST00000439561 MCM2P49736 904 aa10.93□□□□□ -0.66
COPB1-202ENST00000439561 ZDHHC9Q9Y397 364 aa10.93□□□□□ -0.66
COPB1-202ENST00000439561 WDR33Q9C0J8 1336 aaKnown RBP10.92□□□□□ -0.66
COPB1-202ENST00000439561 SBNO2Q9Y2G9 1366 aa10.92□□□□□ -0.66
COPB1-202ENST00000439561 CNPY2Q9Y2B0 182 aa10.92□□□□□ -0.66
COPB1-202ENST00000439561 VIRMAQ69YN4 1812 aaKnown RBP10.92□□□□□ -0.66
COPB1-202ENST00000439561 FANCAO15360 1455 aa10.92□□□□□ -0.66
COPB1-202ENST00000439561 ADGRL1O94910 1474 aa10.92□□□□□ -0.66
COPB1-202ENST00000439561 PDE1AP54750 535 aa10.92□□□□□ -0.66
COPB1-202ENST00000439561 GIMAP6Q6P9H5 292 aa10.92□□□□□ -0.66
COPB1-202ENST00000439561 LRRCC1Q9C099 1032 aa10.92□□□□□ -0.66
COPB1-202ENST00000439561 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
COPB1-202ENST00000439561 ZNF771Q7L3S4 317 aaPredicted RBP10.91□□□□□ -0.66
COPB1-202ENST00000439561 NUTM1Q86Y26 1132 aa10.91□□□□□ -0.66
COPB1-202ENST00000439561 AEBP1Q8IUX7 1158 aa10.91□□□□□ -0.66
COPB1-202ENST00000439561 GOLGA6L6A8MZA4 724 aa10.91□□□□□ -0.66
COPB1-202ENST00000439561 RAPGEF3O95398 923 aa10.91□□□□□ -0.66
COPB1-202ENST00000439561 PALD1Q9ULE6 856 aa10.91□□□□□ -0.66
COPB1-202ENST00000439561 IBTKQ9P2D0 1353 aaPredicted RBP10.91□□□□□ -0.66
COPB1-202ENST00000439561 GNAI2P04899 355 aa10.91□□□□□ -0.66
COPB1-202ENST00000439561 RPGRIP1LQ68CZ1 1315 aa10.91□□□□□ -0.66
COPB1-202ENST00000439561 MX1P20591 662 aa10.9□□□□□ -0.66
COPB1-202ENST00000439561 TERF1P54274 439 aa10.9□□□□□ -0.66
COPB1-202ENST00000439561 PDCL2Q8N4E4 241 aa10.9□□□□□ -0.66
COPB1-202ENST00000439561 ABCC4O15439 1325 aa10.9□□□□□ -0.66
COPB1-202ENST00000439561 C14orf37Q86TY3 774 aa10.9□□□□□ -0.66
COPB1-202ENST00000439561 PDLIM2Q96JY6 352 aa10.9□□□□□ -0.66
COPB1-202ENST00000439561 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.9□□□□□ -0.66
COPB1-202ENST00000439561 MYOM1P52179 1685 aa10.9□□□□□ -0.67
COPB1-202ENST00000439561 CAMK4Q16566 473 aa10.9□□□□□ -0.67
COPB1-202ENST00000439561 FERMT3Q86UX7 667 aa10.9□□□□□ -0.67
COPB1-202ENST00000439561 ESYT1Q9BSJ8 1104 aa10.9□□□□□ -0.67
COPB1-202ENST00000439561 CCDC94Q9BW85 323 aaPredicted RBP10.9□□□□□ -0.67
COPB1-202ENST00000439561 MSH6P52701 1360 aa10.89□□□□□ -0.67
COPB1-202ENST00000439561 CEP152O94986 1710 aa10.89□□□□□ -0.67
COPB1-202ENST00000439561 SURF6O75683 361 aaKnown RBP10.89□□□□□ -0.67
COPB1-202ENST00000439561 CCDC183Q5T5S1 534 aa10.89□□□□□ -0.67
COPB1-202ENST00000439561 DIAPH3Q9NSV4 1193 aa10.89□□□□□ -0.67
COPB1-202ENST00000439561 LTV1Q96GA3 475 aaPredicted RBP10.89□□□□□ -0.67
COPB1-202ENST00000439561 ATP6V1DQ9Y5K8 247 aa10.89□□□□□ -0.67
COPB1-202ENST00000439561 NCKAP5LQ9HCH0 1330 aa10.88□□□□□ -0.67
COPB1-202ENST00000439561 FAM184AQ8NB25 1140 aa10.88□□□□□ -0.67
COPB1-202ENST00000439561 ABCA6Q8N139 1617 aa10.88□□□□□ -0.67
COPB1-202ENST00000439561 CWC27Q6UX04 472 aaKnown RBP10.88□□□□□ -0.67
COPB1-202ENST00000439561 CCDC83Q8IWF9 413 aa10.88□□□□□ -0.67
COPB1-202ENST00000439561 NAP1L2Q9ULW6 460 aaPredicted RBP10.88□□□□□ -0.67
COPB1-202ENST00000439561 CYP2E1P05181 493 aaPredicted RBP10.88□□□□□ -0.67
COPB1-202ENST00000439561 CPA1P15085 419 aa10.88□□□□□ -0.67
COPB1-202ENST00000439561 EIF2S2P20042 333 aaKnown RBP10.88□□□□□ -0.67
COPB1-202ENST00000439561 NCBP3Q53F19 620 aaKnown RBP10.88□□□□□ -0.67
COPB1-202ENST00000439561 CLEC17AQ6ZS10 378 aa10.88□□□□□ -0.67
COPB1-202ENST00000439561 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
COPB1-202ENST00000439561 BRD1O95696 1058 aa10.87□□□□□ -0.67
COPB1-202ENST00000439561 G2E3Q7L622 706 aa10.87□□□□□ -0.67
COPB1-202ENST00000439561 TXNDC2Q86VQ3 553 aa10.87□□□□□ -0.67
COPB1-202ENST00000439561 SMAP1Q8IYB5 467 aaPredicted RBP10.87□□□□□ -0.67
COPB1-202ENST00000439561 MYRIPQ8NFW9 859 aa10.87□□□□□ -0.67
COPB1-202ENST00000439561 MAP3K4Q9Y6R4 1608 aa10.87□□□□□ -0.67
COPB1-202ENST00000439561 C16orf45Q96MC5 204 aaPredicted RBP10.87□□□□□ -0.67
COPB1-202ENST00000439561 TRIM5Q9C035 493 aa10.87□□□□□ -0.67
COPB1-202ENST00000439561 SRCIN1Q9C0H9 1055 aa10.87□□□□□ -0.67
COPB1-202ENST00000439561 SPG7Q9UQ90 795 aa10.87□□□□□ -0.67
COPB1-202ENST00000439561 NPHP1O15259 732 aa10.86□□□□□ -0.67
COPB1-202ENST00000439561 FOSBP53539 338 aa10.86□□□□□ -0.67
COPB1-202ENST00000439561 SPHKAPQ2M3C7 1700 aa10.86□□□□□ -0.67
COPB1-202ENST00000439561 MYOM2P54296 1465 aa10.86□□□□□ -0.67
COPB1-202ENST00000439561 FGD1P98174 961 aa10.86□□□□□ -0.67
COPB1-202ENST00000439561 CKAP2LQ8IYA6 745 aa10.86□□□□□ -0.67
COPB1-202ENST00000439561 PRIMPOLQ96LW4 560 aa10.86□□□□□ -0.67
COPB1-202ENST00000439561 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.86□□□□□ -0.67
COPB1-202ENST00000439561 UBTFL1P0CB47 393 aaPredicted RBP10.86□□□□□ -0.67
COPB1-202ENST00000439561 CASTP20810 708 aaKnown RBP10.86□□□□□ -0.67
COPB1-202ENST00000439561 ESF1Q9H501 851 aaKnown RBP10.86□□□□□ -0.67
COPB1-202ENST00000439561 LRRFIP2Q9Y608 721 aaKnown RBP10.86□□□□□ -0.67
COPB1-202ENST00000439561 CDK11BP21127 795 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms