RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 GOLGA2Q08379 1002 aa13.1□□□□□ -0.31
CBX5-202ENST00000439541 PARP4Q9UKK3 1724 aaKnown RBP13.1□□□□□ -0.31
CBX5-202ENST00000439541 MCM10Q7L590 875 aa13.09□□□□□ -0.31
CBX5-202ENST00000439541 RAPGEF4Q8WZA2 1011 aa13.09□□□□□ -0.31
CBX5-202ENST00000439541 CARD10Q9BWT7 1032 aa13.09□□□□□ -0.31
CBX5-202ENST00000439541 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
CBX5-202ENST00000439541 OVOS2A0A0G2JMS6 1433 aa13.09□□□□□ -0.31
CBX5-202ENST00000439541 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
CBX5-202ENST00000439541 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
CBX5-202ENST00000439541 LRRC37A3O60309 1634 aa13.08□□□□□ -0.31
CBX5-202ENST00000439541 WNK3Q9BYP7 1800 aa13.08□□□□□ -0.32
CBX5-202ENST00000439541 BCL9LQ86UU0 1499 aa13.08□□□□□ -0.32
CBX5-202ENST00000439541 MAP3K5Q99683 1374 aa13.08□□□□□ -0.32
CBX5-202ENST00000439541 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.32
CBX5-202ENST00000439541 NGLY1Q96IV0 654 aa13.08□□□□□ -0.32
CBX5-202ENST00000439541 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
CBX5-202ENST00000439541 SLFN5Q08AF3 891 aa13.07□□□□□ -0.32
CBX5-202ENST00000439541 PDE3BQ13370 1112 aa13.07□□□□□ -0.32
CBX5-202ENST00000439541 MEX3CQ5U5Q3 659 aaKnown RBP13.07□□□□□ -0.32
CBX5-202ENST00000439541 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
CBX5-202ENST00000439541 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
CBX5-202ENST00000439541 TSR2Q969E8 191 aaKnown RBP13.06□□□□□ -0.32
CBX5-202ENST00000439541 DISP2A7MBM2 1401 aa13.06□□□□□ -0.32
CBX5-202ENST00000439541 LMOD3Q0VAK6 560 aa13.06□□□□□ -0.32
CBX5-202ENST00000439541 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
CBX5-202ENST00000439541 PLEKHO1Q53GL0 409 aaPredicted RBP13.06□□□□□ -0.32
CBX5-202ENST00000439541 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
CBX5-202ENST00000439541 CCDC9Q9Y3X0 531 aaKnown RBP13.05□□□□□ -0.32
CBX5-202ENST00000439541 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
CBX5-202ENST00000439541 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.04□□□□□ -0.32
CBX5-202ENST00000439541 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
CBX5-202ENST00000439541 E9PSI1 815 aa13.04□□□□□ -0.32
CBX5-202ENST00000439541 IL2RBP14784 551 aa13.04□□□□□ -0.32
CBX5-202ENST00000439541 AMOTQ4VCS5 1084 aa13.04□□□□□ -0.32
CBX5-202ENST00000439541 UNC5CLQ8IV45 518 aa13.04□□□□□ -0.32
CBX5-202ENST00000439541 SPATA31A1Q5TZJ5 1347 aa13.04□□□□□ -0.32
CBX5-202ENST00000439541 FANCIQ9NVI1 1328 aa13.04□□□□□ -0.32
CBX5-202ENST00000439541 TRMT2AQ8IZ69 625 aaKnown RBP13.04□□□□□ -0.32
CBX5-202ENST00000439541 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
CBX5-202ENST00000439541 RTF1Q92541 710 aaKnown RBP13.04□□□□□ -0.32
CBX5-202ENST00000439541 AFF2P51816 1311 aa13.04□□□□□ -0.32
CBX5-202ENST00000439541 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
CBX5-202ENST00000439541 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
CBX5-202ENST00000439541 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
CBX5-202ENST00000439541 CYP27B1O15528 508 aa13.03□□□□□ -0.32
CBX5-202ENST00000439541 ADRA2BP18089 450 aa13.03□□□□□ -0.32
CBX5-202ENST00000439541 C1orf141Q5JVX7 400 aa13.03□□□□□ -0.32
CBX5-202ENST00000439541 ERICH6BQ5W0A0 696 aa13.03□□□□□ -0.32
CBX5-202ENST00000439541 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
CBX5-202ENST00000439541 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
CBX5-202ENST00000439541 USP21Q9UK80 565 aa13.03□□□□□ -0.32
CBX5-202ENST00000439541 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.32
CBX5-202ENST00000439541 FBXO41Q8TF61 875 aa13.02□□□□□ -0.32
CBX5-202ENST00000439541 LGR6Q9HBX8 967 aa13.02□□□□□ -0.32
CBX5-202ENST00000439541 SPG7Q9UQ90 795 aa13.02□□□□□ -0.32
CBX5-202ENST00000439541 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.33
CBX5-202ENST00000439541 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.33
CBX5-202ENST00000439541 PHKG2P15735 406 aa13.02□□□□□ -0.33
CBX5-202ENST00000439541 IL16Q14005 1332 aa13.02□□□□□ -0.33
CBX5-202ENST00000439541 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
CBX5-202ENST00000439541 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
CBX5-202ENST00000439541 PLEKHG2Q9H7P9 1386 aa13.01□□□□□ -0.33
CBX5-202ENST00000439541 GLI3P10071 1580 aa13□□□□□ -0.33
CBX5-202ENST00000439541 TNS2Q63HR2 1409 aa13□□□□□ -0.33
CBX5-202ENST00000439541 PCDH11XQ9BZA7 1347 aa13□□□□□ -0.33
CBX5-202ENST00000439541 PCDH11YQ9BZA8 1340 aa13□□□□□ -0.33
CBX5-202ENST00000439541 VPS72Q15906 364 aa13□□□□□ -0.33
CBX5-202ENST00000439541 MYH16Q9H6N6 1097 aa13□□□□□ -0.33
CBX5-202ENST00000439541 MBIPQ9NS73 344 aa13□□□□□ -0.33
CBX5-202ENST00000439541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.331e-6■■□□□ 14.2
CBX5-202ENST00000439541 MIS18AQ9NYP9 233 aa13□□□□□ -0.33
CBX5-202ENST00000439541 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
CBX5-202ENST00000439541 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
CBX5-202ENST00000439541 DDX54Q8TDD1 881 aaKnown RBP12.99□□□□□ -0.33
CBX5-202ENST00000439541 IFT57Q9NWB7 429 aa12.99□□□□□ -0.33
CBX5-202ENST00000439541 TOGARAM1Q9Y4F4 1720 aa12.99□□□□□ -0.33
CBX5-202ENST00000439541 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
CBX5-202ENST00000439541 CALD1Q05682 793 aaKnown RBP12.99□□□□□ -0.33
CBX5-202ENST00000439541 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
CBX5-202ENST00000439541 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
CBX5-202ENST00000439541 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
CBX5-202ENST00000439541 GNAI1P63096 354 aa12.98□□□□□ -0.33
CBX5-202ENST00000439541 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
CBX5-202ENST00000439541 CFAP44Q96MT7 982 aa12.98□□□□□ -0.33
CBX5-202ENST00000439541 SIPA1L3O60292 1781 aaPredicted RBP12.98□□□□□ -0.33
CBX5-202ENST00000439541 ATRNO75882 1429 aa12.98□□□□□ -0.33
CBX5-202ENST00000439541 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
CBX5-202ENST00000439541 MRC1P22897 1456 aa12.97□□□□□ -0.33
CBX5-202ENST00000439541 TSPYL4Q9UJ04 414 aa12.97□□□□□ -0.33
CBX5-202ENST00000439541 RCAN3Q9UKA8 241 aa12.97□□□□□ -0.33
CBX5-202ENST00000439541 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
CBX5-202ENST00000439541 THSD7AQ9UPZ6 1657 aa12.97□□□□□ -0.33
CBX5-202ENST00000439541 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.33
CBX5-202ENST00000439541 CHL1O00533 1208 aa12.96□□□□□ -0.33
CBX5-202ENST00000439541 BARGINQ6ZT62 677 aa12.96□□□□□ -0.33
CBX5-202ENST00000439541 TEFQ10587 303 aa12.95□□□□□ -0.34
CBX5-202ENST00000439541 TSPYL6Q8N831 410 aa12.95□□□□□ -0.34
CBX5-202ENST00000439541 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
CBX5-202ENST00000439541 A0A0G2JS52 829 aa12.95□□□□□ -0.34
CBX5-202ENST00000439541 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms